rna800, rna800 (mRNA) Nannochloropsis gaditana

Overview
Namerna800
Unique Namerna800
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1527
Alignment locationCM002456.1:448228..449089 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100106g14.1443.mrna
Orig protein idgnl|cribi|Naga_100106g14.1443
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:448228..449089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100106g14gene766Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna800rna800-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29869.1cds800Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna800 ID=rna800|Name=rna800|organism=Nannochloropsis gaditana|type=mRNA|length=1527bp
ATGAAGGGGTCAGATGTCCTCGGTTTCTTTTCAGTATTTTTAGTCGCTCA
CAACGCGGCTGCATTTTTGCGACCTCCCTGCCTCAAAGATGCCAGCCATG
GCCGTGGGACATACCCACATCAACGCTCTGTATTCACCCTCGTCGCAAGC
CCTCTTTCCGCAACATCTACCGCCAACGACATCAACAGCGGACCCACTAG
TCATCATAAAATTTTGATACTTGGCGGAGGCACTGGAGGGTGCGGTTCGG
CTGCCCATTTAATTAATGAGGGAATGCAAGCGGCCGACATCTGCATTGTC
GAACCCGCCTCGACTCACTATTATCAACCCCTGTGGACTTTGGTGGGCGC
AGGCATATTTGATCGAGCAACGTCAGCACGACCAATGTCCGACATAATTC
CTAAGGGAGTCGCTTGGGCCCGAGACGCCGCAAGTAAAATCGATCCAGAA
ATCAATACCGTGCAGTGCGCTAGCGGACGACAGCTTACTTATGACTATCT
TATAGTTGCCACAGGCCTTCAATGCGACTGGGATAAAATCCCAGGCCTAC
AGGATGCCTTGCACAACAGTGAAACCTCACACGTGTGTTCGAATTACCAT
CCCGAGTATGCGGAGAACACCTGGCGCGTCCTTAGGGGCCTCAGCGAAGG
CAGTGCTCTCTTCACCCAACCGCCTTCCCCTGTCAAGTGCGGGGGAGCCC
CTCAAAAAATCATGTGGCTTGCCGACGACTATTTGCGTCGGAACAACAGG
CGCAACGCCGTGGACATTAATTTTTTCATGCCACAAAAAGTCTATTTCGG
AGTGCCTCGGTATGCGGAGGTCCTTGAGTCGGAGTCCAAGGCCCGCGGCG
TTGGTTTTGTCTTCGAGACTTTGCTGGTGGGCGTCAACGGGGAGCGCCGC
GAGGCCACTTTCCAACGGGTGAAGGACGGGAGCGAATACACGCTGCCCTA
CGCCATGCTCCACGTGACTCCGCCCATGTCCGCGCCCGACTTCCTCAAGA
CGAGCCCCCTGGCCGACCCCAAGGGGTTCGTGGAGGTGGACAAGTACACG
ACCCAGCACGTGCGCTACCCGAACGTTTTCGCCCTCGGGGACTCCTCCTC
GCTGCCCACCTCCAAGACCATGGCCGCGATCACGGGCCAGGCGCCGGTGC
TGGTGCATAACCTCCTTCGCGTCATGCGGGGGAAGCGAGCGACTGCCACC
TACGACGGCTTCACTTCCTGCCCCATCGTCCTGGGCTACGACAAGCTGCT
CATGACCGAATTTGTCTACGACTGTGTCCCGCAGGAAACATTCACGAAAA
TTCCTTTGCCTTTCTTAGACCAAGGCAAGCCCTCTTTCTTCTTTTTCTTG
GTCAAGAAATACGTGTTCCCATTTGTGTACTGGAACCTGTTTATGAAGGG
GAGGTGGTACGGATCGAGGCTTATTTTCAAGCCCGATTATTCGGAAGCCG
ATCGCCGGGCGGACATGGAGGAAGAGAGCAAGGATGTAAAGGGAATGGCA
GATGCTCAAGCGGGGAAGCGGGCTTAG
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protein sequence of rna800

>rna800-protein ID=rna800-protein|Name=rna800|organism=Nannochloropsis gaditana|type=polypeptide|length=218bp
MWIEYKRDSADQQKVIPLAAFRAWPAISLFFLTPLKRLGGRGRAAYRCLP
CLRRLGTPPRPARRSRAWPRWKGSPAFTHSLLSTTAWHDMESVSQYQIRS
RWAGGDTPPHFSHYAIAPSPPPSISSFTLTKPRVCACTHQHKVLLCIQYP
CPGQARICTRKVKSHKAMVASAIIISIHNFQTRTNARSKSIKDACWLCAF
MRLEDAEMTRQRDIKYSM
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mRNA from alignment at CM002456.1:448228..449089+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna800 ID=rna800|Name=rna800|organism=Nannochloropsis gaditana|type=mRNA|length=862bp|location=Sequence derived from alignment at CM002456.1:448228..449089+ (Nannochloropsis gaditana)
ATGTGGATCGAGTACAAAAGAGACAGTGCGGACCAACAAAAAGTGATCCC
CCTGGCGGCGTTTCGCGCTTGGCCGGCAATatctctcttcttcttgaccC
CATTGAAacggcttggaggacgtggaaggtgCAGAAGCTGAGCTCGACTT
GTGGCCACGCCATCTCACAGGTTCTGCGCGACGTAGAGCAGCGTACAGAT
GTCTACCTTGTCTACGACGGTTAGGTACTCCCCCACGTCCAGCACGCCGT
TCAAGGGCCTGGCCCCGCTGGAAGGGGTCGCCAGCCTTCACCCACTCGCT
CCTGTCTACCACTGCATGGCATGACATGGAGAGTGTGAGTCAATATCAAA
TACGAAGCCGGTGGGCTGGCGGGGACACTCCCCCTCACTTCTCCCACTAC
GCcatcgctccttcccctcctccctccatctcttcatTCACCCTTACCAA
GCCGCGTGTCTGCGCGTGTACGCATCAGCATAAGGTTTTACTTTGTATCC
AATATCCCTGCCCGGGGCAGGCACGTATTTGTACACGTGCGTGGGCGGCA
TTGGCAACTTCCCTGTTTATTCATTTCCGCCTTGGTCACGATGCGCGGCG
TCGCACCCGTGGCGGTAGTCCCGCTGTTGAATGCCGCCCCGATACCACAC
ACAGGTAATGCCCTTTTAAATGTTGTGTTTAAGGGAAGGTAAAGAGTCAC
AAAGCAATGGTAGCGTCAGCCATTATCATAAGCATACATAATTTTCAAAC
GCGTACAAACGCTCGCTCGAAGTCGATTAAAGACGCGTGTTGGCTTTGCG
CCTTCATGCGCCTTGAAGACGCAGAAATGACGCGACAGCGAGACATAAAG
TACAGCATGTAG
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Coding sequence (CDS) from alignment at CM002456.1:448228..449089+

>rna800 ID=rna800|Name=rna800|organism=Nannochloropsis gaditana|type=CDS|length=1971bp|location=Sequence derived from alignment at CM002456.1:448228..449089+ (Nannochloropsis gaditana)
ATGTGGATCGAGTACAAAAGAGACAGTGCGGACCAACAAAAAGTGATCCC
CCTGGCGGCGTTTCGCGCTTGGCCGGCAATatctctcttcttcttgaccC
CATTGAAacggcttggaggacgtggaagAGCAGCGTACAGATGTCTACCT
TGTCTACGACGGTTAGGTACTCCCCCACGTCCAGCACGCCGTTCAAGGGC
CTGGCCCCGCTGGAAGGGGTCGCCAGCCTTCACCCACTCGCTCCTGTCTA
CCACTGCATGGCATGACATGGAGAGTGTGAGTCAATATCAAATACGAAGC
CGGTGGGCTGGCGGGGACACTCCCCCTCACTTCTCCCACTACGCcatcgc
tccttcccctcctccctccatctcttcatTCACCCTTACCAAGCCGCGTG
TCTGCGCGTGTACGCATCAGCATAAGGTTTTACTTTGTATCCAATATCCC
TGCCCGGGGCAGGCACGTATTTGTACACGGAAGGTAAAGAGTCACAAAGC
AATGGTAGCGTCAGCCATTATCATAAGCATACATAATTTTCAAACGCGTA
CAAACGCTCGCTCGAAGTCGATTAAAGACGCGTGTTGGCTTTGCGCCTTC
ATGCGCCTTGAAGACGCAGAAATGACGCGACAGCGAGACATAAAGTACAG
CATGTAGATGTGGATCGAGTACAAAAGAGACAGTGCGGACCAACAAAAAG
TGATCCCCCTGGCGGCGTTTCGCGCTTGGCCGGCAATatctctcttcttc
ttgaccCCATTGAAacggcttggaggacgtggaagAGCAGCGTACAGATG
TCTACCTTGTCTACGACGGTTAGGTACTCCCCCACGTCCAGCACGCCGTT
CAAGGGCCTGGCCCCGCTGGAAGGGGTCGCCAGCCTTCACCCACTCGCTC
CTGTCTACCACTGCATGGCATGACATGGAGAGTGTGAGTCAATATCAAAT
ACGAAGCCGGTGGGCTGGCGGGGACACTCCCCCTCACTTCTCCCACTACG
CcatcgctccttcccctcctccctccatctcttcatTCACCCTTACCAAG
CCGCGTGTCTGCGCGTGTACGCATCAGCATAAGGTTTTACTTTGTATCCA
ATATCCCTGCCCGGGGCAGGCACGTATTTGTACACGGAAGGTAAAGAGTC
ACAAAGCAATGGTAGCGTCAGCCATTATCATAAGCATACATAATTTTCAA
ACGCGTACAAACGCTCGCTCGAAGTCGATTAAAGACGCGTGTTGGCTTTG
CGCCTTCATGCGCCTTGAAGACGCAGAAATGACGCGACAGCGAGACATAA
AGTACAGCATGTAGATGTGGATCGAGTACAAAAGAGACAGTGCGGACCAA
CAAAAAGTGATCCCCCTGGCGGCGTTTCGCGCTTGGCCGGCAATatctct
cttcttcttgaccCCATTGAAacggcttggaggacgtggaagAGCAGCGT
ACAGATGTCTACCTTGTCTACGACGGTTAGGTACTCCCCCACGTCCAGCA
CGCCGTTCAAGGGCCTGGCCCCGCTGGAAGGGGTCGCCAGCCTTCACCCA
CTCGCTCCTGTCTACCACTGCATGGCATGACATGGAGAGTGTGAGTCAAT
ATCAAATACGAAGCCGGTGGGCTGGCGGGGACACTCCCCCTCACTTCTCC
CACTACGCcatcgctccttcccctcctccctccatctcttcatTCACCCT
TACCAAGCCGCGTGTCTGCGCGTGTACGCATCAGCATAAGGTTTTACTTT
GTATCCAATATCCCTGCCCGGGGCAGGCACGTATTTGTACACGGAAGGTA
AAGAGTCACAAAGCAATGGTAGCGTCAGCCATTATCATAAGCATACATAA
TTTTCAAACGCGTACAAACGCTCGCTCGAAGTCGATTAAAGACGCGTGTT
GGCTTTGCGCCTTCATGCGCCTTGAAGACGCAGAAATGACGCGACAGCGA
GACATAAAGTACAGCATGTAG
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Synonyms
Publications