|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100340g8.5989.mrna |
| Orig protein id | gnl|cribi|Naga_100340g8.5989 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:314060..316243 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7996 ID=rna7996|Name=rna7996|organism=Nannochloropsis gaditana|type=mRNA|length=2014bp
CCATCTTAGGGTCTGTGGTTGTCAAGGAGCATGCCAGGGTGTATGTGATA
TGGTGGATATGGTTGCATCGTGCGCCAGTTAATAGATTACACACATCACA
GCAACATCGCGAGACCGAGGTCCTTCAACCCTGCCGACAACCTCAACATC
AGCACGCCGCCTCCCTCCGCTGCAGTGCCTCGACCCCCTGTACTTATTTC
CTCCGACGATCATGAAGCATCCACCCTTTCTGTCATTACGATTGGCTATA
GTTTTCCAGTTTCTAGTAAATTTTAGATCTGACGTGGTAGCTTTCCACCT
TCCCGGTGGAAACCTCTATCGCGTCGGTGGGAGGACATACACATGTCCCG
TGACTGCTCCGCAGCTTCCCTCCTTGGACACGCTGTATTTCGCGAGAAGC
GTCCCAAGAACAATCAACATAGTCACCTCGACCTCGACCGACAGCAAGAA
CAATGCCTTTGGCACTGCTCCCCCCGCCCCCACCTCCCTCCCCTACCCCA
GGCTCGGGGACGTCGTGCTCTTCCCCGGGAAGTGGGTGGGCGACACGGGC
ATCGGGCAGATCCGATTCCTGCAGCTGACAGGGGACGGGCGAGGCGGGAA
GGAATGGATCGCCGACTTGACCCCCTTCAAGGACGTCGGGGAAGACCTGT
ACCGTGCAGAGAAGGGGGCGCGGGCCCGGACCTTCCCCGTGAGCGCCCTC
CAGCCCCTCTCGCATTTCTACATCGGCAGCTCGGACGCCTTCAAAGTGCC
GCACAAAGAGGAAGCGGGAGGGGAAGGGATGGGGCGGAGGCGGGAGCCCG
TGAGGATGGCACCCGGCTACAGGACGGAGGGCTTCTCCCTGGCGCCCGCC
AAGGTGGACGCAGAGGCTATGGAGGCGGCGAGGAGCAAGTACCGGGACTT
GAAGCGGCGGATCCTGACGGACACGGCCGCCTTCGGAGGCCTCGCGACCG
TCGCCGTGGGCCTGAACGCCGGCGTGGAGGACGCAGGGATCTTTCTGGCG
GGCGTGGCGGGCTCCGTGCTGTACCTGGTCCTCCTCACGCAGAGAGCGGA
CGCCATGGGGCAGGCGGGGGGGGAGGGGGGAGGGCTCAGCAAGGCCCGGG
GGGGGAGTCTGGTGGGGAGGAGCGTGGGCGCGACCCGATTCTTGGTCCCC
GTCGTCTTGATCGCGGCCCTGGCCTACAAGAACCTGTACATGGAGGGGGG
GGGAGGGGGCGCGGGCCTGGCGGGGGGCCGGCTCTTCAACTACGTTCCCC
AGGACGAGTTCTGGTCGGCCACCTTGGGCTTCCTCTCGTACCGAGTGCCG
ATGCTGGGGCGGGAGGAGGGGGAGGTGGACGGGCGGGACTACCATTTCGT
GGAGGACTTCGCCTTCCAAGTCATGCGGGAGCAAGGGCGCTTCTTGACGG
CCTATCAGGAGGAAGCGGGGGAGGGCAGGGCCTGGTTCGGACTTCGGCCG
AGCGACGTGGTGGACGTGATGAGAAAGGAAGGGAAGGTGTCGGTGCTGGC
GCTGGACGCCTTCGCTGCAGACAAGCTGCTGGCCTTGGGGGAGGCCCGCC
TGATCGGCGTCTGGGTGACTCTCAACACCGTGGACCAGCTGCGGGAGCGG
TATGGAGGGGAGGAGGGAGGGAAGGAGGAGGAGGTGGAGGCGGCGGTGTC
GAGGGCGACTGTGGCCATAGAGCACGCCCTCATGGGGGGAGGCGGGGAGG
AGGGGCTTCTACGAGCACACCATCTACGACGACAAGGGCAAGGAGGAGAC
GCTCCGGTCGCTGCGAGACTTTGCGGACTTCGCCCTCAGCCTGTGAGGGC
TCTTCCTCCCCTCCCTTCTCGGCGACTGCTCCCGGTCCCAGCCTCGCCAC
GCCGGAGGCTCTCGCGATATTGGGATGGGAGATGGTTGGGGGGGGGGGAA
CTCGGCCCTGGGAGAAGGCGGAGTCCCGAGAATCGGGCAAGGAACAAGAA
GCGTGAGCGGGCACTCAGGGCTTTGTTTGAATTAGCGAATTTCTCTTTTT
TTCACTCTCGCTGA back to topprotein sequence of rna7996 >rna7996-protein ID=rna7996-protein|Name=rna7996|organism=Nannochloropsis gaditana|type=polypeptide|length=565bp
MACSSTSSTPRLSSSTFVTPFDSSSRVEGVGRSHQSTELLARRVSGVRID
LSPPSPPISSSTRPGDGMSPLLSNAQSFQNQLHRHSRQSSTCSGNDTLSA
SSSSTSSSSSPFPALLKAFNPQEVQVEVECEPAAIGDRVLLRSIIIHNMS
KLDLDDSLTLTAEPNDLCFLERVLVGSLARGQRKVVPLQLRVRSSLTMPY
EDAIPERYVLTLSHASPSSLPPSSASSPPPDLEIRYSFENSFRYFLKGLP
GLAPRRVVSLPCPSPPSRPPSSPPARRRLPAPCNLVLVGPAGAGKSTLLA
HLLTLVSEREHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGF
TPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQ
ACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRA
DPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYK
VLAKALQLAAEYVESHPEGAREEGPGQEAVPLRSLFGVSHAWPAFLEAED
SAPDALQPYMRGGVL back to topmRNA from alignment at KK037247.1:314060..316243- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7996 ID=rna7996|Name=rna7996|organism=Nannochloropsis gaditana|type=mRNA|length=2184bp|location=Sequence derived from alignment at KK037247.1:314060..316243- (Nannochloropsis gaditana)
ATGGCCTGCTCCAGCACGTCGTCCACCCCTAGACTGTCCTCCTCGACATT
TGTCACGCCCTTTGACTCCTCGTCGCGGGTAGAGGGCGTCGGACGCTCCC
ATCAAAGCACCGAGCTCCTTGCCAGGCGCGTGTCCGGTGTGCGCATCGAC
CTTTCTCCCCCTTCCCCGCCCATCTCTTCCTCCACGCGCCCAGGCGACGG
GATGTCGCCCCTTTTATCCAACGCCCAATCGTTCCAAAACCAGTTGCACC
GTCATTCTCGGCAATCCTCAACATGCAGCGGCAACGACACCCTCTCGGCC
TCCTCCTCCTCTACCTCCTCCTCCTCCTCGCCCTTTCCGGCCCTTCTCAA
GGCCTTCAACCCCCAAGAGGTACAGGTGGAGGTGGAGTGCGAACCTGCGG
CCATCGGAGACAGGGTCCTCCTCCGCAGCATCATCATCCACAACATGTCG
AAGCTCGACCTGGACGACTCCCTCACGCTCACTGCGGAGCCCAACGACCT
CTGCTTTCTGGAGCGCGTCCTGGTCGGCAGTCTGGCCAGAGGGCAACGCA
AGGTCGTCCCACTCCAGCTCCGGGTCAGGAGCTCACTGACCATGCCCTAC
GAGGACGCGATCCCAGAGAGATATGTCCTCACCCTCAGCCACGCCTCTCC
TTCCTCTCTCCCGCCTTCTTCCGCCTCCTCCCCGCCCCCCGACCTGGAGA
TCCGCTACAGCTTCGAGAACTCCTTCCGGTACTTCCTCAAGGGCCTCCCG
GGCCTGGCCCCTCGACGTGTGGTCAGCCTTCCCTGTCCGTCACCGCCCTC
GCGCCCCCCGTCCTCCCCCCCTGCCCGGCGCCGCCTCCCCGCGCCCTGCA
ACCTCGTGCTGGTGGGTCCTGCCGGCGCGGGGAAGTCCACCCTGCTCGCC
CACCTCCTCACGCTCGTCAGCGAGCGGGAGCACGTCAATTTGGGCGGTGT
GCGGACCTGCGCCACCTCCTCGCACGGGACCTTGGAGCTCCGCGCCTACC
CCCTGCACCCGACCGTCTCGGCGGTCTCCGTTTGGGACACCCGTGGCTTC
ACACCCAGCACCTACACGTGCGAAGAGCTCGCCAATATTTTGGCGGGCGA
CTACCCGGAGCGGCGGTGGGACCCGGTGGGGCGGGACGCGGGGAGGGAGG
CGGAGGTGCGGGAAGAGGGGGGGGCGACCCGAGCCCTGCGGGAGCAGCAG
GCCTGTGTGGTGGTCCTCCCGGAGGGGATCCTTCAGTCCGCGGTGGAGCT
GGACCAGCTCCGCCGGCAGCTGGAGCTGGTGCAGCGGGCAGGCCTGAACC
CCTTGGTCCTGCTCACCCACGTGGACCTGGCCTACCCCAGCCTGCGGGCG
GACCCGTCGGGGCGTGGGGTGGGGGAGCTGGGGGAGGCGAGGCGGGAGGC
GGCCCGGCAGCTGGGGGTGGAGGCGAACCGCGTCCTGCACATGGTGCCCT
ACAAGGACGAGGAGACCAGGTGCGTGCCGCCTTTATTCGACGTGTGGTCC
CCGTCCTCCCGGCCCATGTCTTGATAAACCGGCCCGTGACGGCGCTTGCG
CGGGCCTCCGGTCCCCCGAGCGGGTCCTGTCTCGCTCACGACGACCCACT
TACCTCGACACACACACCCCGCAGGCGCTTCTCCATCGACCGCTTGGTTT
ACAAGGTCCTGGCCAAGGCGCTACAGCTGGCTGCCGAGTACGTGGAGTCG
CACCCTGAGGGCGCCCGGGAGGAGGGCCCAGGTCAGGAGGCAGTCCCCTT
GCGCTCCTTGTTCGGCGTCTCCCACGCCTGGCCGGCCTTTCTGGAGGCGG
AGGACTCTGCCCCGGACGCCCTCCGTGAGGAGCCAAGAGAGGGGGGGCAG
CCGGGCGGGCTCCGAGGCCCCTCGGTGGCCTCGTCGGGCCGGACGTCGCC
TCTGGGCGGGGTGGCGGGGAGGGGCGAGGTGGGGTCGGGGGGGGCGGGCG
GGGAGGGCGGGCGGGGAGGGCGGGATGAGGACAGTGAGACGGTGGTGGTG
AGGGCGGAGGAGAGGGAGAGGGGTGGGGGGGTAGAGGAGGACGGGACGGA
GGACGGGGAGGGGGGGGGGGAGGCGGGGGGGAGGAGGGGAAGAGGAGGAG
GAGGGGATGTCCTGGATGCGTGGTTCGTGGACGATAAGCGAGGGGACCAT
GCCAGAGCCGTACATGCGGGGGGGGGTGCTCTGA back to topCoding sequence (CDS) from alignment at KK037247.1:314060..316243- >rna7996 ID=rna7996|Name=rna7996|organism=Nannochloropsis gaditana|type=CDS|length=5094bp|location=Sequence derived from alignment at KK037247.1:314060..316243- (Nannochloropsis gaditana)
AGCCGTACATGCGGGGGGGGGTGCTCTGAGCGCTTCTCCATCGACCGCTT
GGTTTACAAGGTCCTGGCCAAGGCGCTACAGCTGGCTGCCGAGTACGTGG
AGTCGCACCCTGAGGGCGCCCGGGAGGAGGGCCCAGGTCAGGAGGCAGTC
CCCTTGCGCTCCTTGTTCGGCGTCTCCCACGCCTGGCCGGCCTTTCTGGA
GGCGGAGGACTCTGCCCCGGACGCCCTCCATGGCCTGCTCCAGCACGTCG
TCCACCCCTAGACTGTCCTCCTCGACATTTGTCACGCCCTTTGACTCCTC
GTCGCGGGTAGAGGGCGTCGGACGCTCCCATCAAAGCACCGAGCTCCTTG
CCAGGCGCGTGTCCGGTGTGCGCATCGACCTTTCTCCCCCTTCCCCGCCC
ATCTCTTCCTCCACGCGCCCAGGCGACGGGATGTCGCCCCTTTTATCCAA
CGCCCAATCGTTCCAAAACCAGTTGCACCGTCATTCTCGGCAATCCTCAA
CATGCAGCGGCAACGACACCCTCTCGGCCTCCTCCTCCTCTACCTCCTCC
TCCTCCTCGCCCTTTCCGGCCCTTCTCAAGGCCTTCAACCCCCAAGAGGT
ACAGGTGGAGGTGGAGTGCGAACCTGCGGCCATCGGAGACAGGGTCCTCC
TCCGCAGCATCATCATCCACAACATGTCGAAGCTCGACCTGGACGACTCC
CTCACGCTCACTGCGGAGCCCAACGACCTCTGCTTTCTGGAGCGCGTCCT
GGTCGGCAGTCTGGCCAGAGGGCAACGCAAGGTCGTCCCACTCCAGCTCC
GGGTCAGGAGCTCACTGACCATGCCCTACGAGGACGCGATCCCAGAGAGA
TATGTCCTCACCCTCAGCCACGCCTCTCCTTCCTCTCTCCCGCCTTCTTC
CGCCTCCTCCCCGCCCCCCGACCTGGAGATCCGCTACAGCTTCGAGAACT
CCTTCCGGTACTTCCTCAAGGGCCTCCCGGGCCTGGCCCCTCGACGTGTG
GTCAGCCTTCCCTGTCCGTCACCGCCCTCGCGCCCCCCGTCCTCCCCCCC
TGCCCGGCGCCGCCTCCCCGCGCCCTGCAACCTCGTGCTGGTGGGTCCTG
CCGGCGCGGGGAAGTCCACCCTGCTCGCCCACCTCCTCACGCTCGTCAGC
GAGCGGGAGCACGTCAATTTGGGCGGTGTGCGGACCTGCGCCACCTCCTC
GCACGGGACCTTGGAGCTCCGCGCCTACCCCCTGCACCCGACCGTCTCGG
CGGTCTCCGTTTGGGACACCCGTGGCTTCACACCCAGCACCTACACGTGC
GAAGAGCTCGCCAATATTTTGGCGGGCGACTACCCGGAGCGGCGGTGGGA
CCCGGTGGGGCGGGACGCGGGGAGGGAGGCGGAGGTGCGGGAAGAGGGGG
GGGCGACCCGAGCCCTGCGGGAGCAGCAGGCCTGTGTGGTGGTCCTCCCG
GAGGGGATCCTTCAGTCCGCGGTGGAGCTGGACCAGCTCCGCCGGCAGCT
GGAGCTGGTGCAGCGGGCAGGCCTGAACCCCTTGGTCCTGCTCACCCACG
TGGACCTGGCCTACCCCAGCCTGCGGGCGGACCCGTCGGGGCGTGGGGTG
GGGGAGCTGGGGGAGGCGAGGCGGGAGGCGGCCCGGCAGCTGGGGGTGGA
GGCGAACCGCGTCCTGCACATGGTGCCCTACAAGGACGAGGAGACCAGAG
CCGTACATGCGGGGGGGGGTGCTCTGAGCGCTTCTCCATCGACCGCTTGG
TTTACAAGGTCCTGGCCAAGGCGCTACAGCTGGCTGCCGAGTACGTGGAG
TCGCACCCTGAGGGCGCCCGGGAGGAGGGCCCAGGTCAGGAGGCAGTCCC
CTTGCGCTCCTTGTTCGGCGTCTCCCACGCCTGGCCGGCCTTTCTGGAGG
CGGAGGACTCTGCCCCGGACGCCCTCCATGGCCTGCTCCAGCACGTCGTC
CACCCCTAGACTGTCCTCCTCGACATTTGTCACGCCCTTTGACTCCTCGT
CGCGGGTAGAGGGCGTCGGACGCTCCCATCAAAGCACCGAGCTCCTTGCC
AGGCGCGTGTCCGGTGTGCGCATCGACCTTTCTCCCCCTTCCCCGCCCAT
CTCTTCCTCCACGCGCCCAGGCGACGGGATGTCGCCCCTTTTATCCAACG
CCCAATCGTTCCAAAACCAGTTGCACCGTCATTCTCGGCAATCCTCAACA
TGCAGCGGCAACGACACCCTCTCGGCCTCCTCCTCCTCTACCTCCTCCTC
CTCCTCGCCCTTTCCGGCCCTTCTCAAGGCCTTCAACCCCCAAGAGGTAC
AGGTGGAGGTGGAGTGCGAACCTGCGGCCATCGGAGACAGGGTCCTCCTC
CGCAGCATCATCATCCACAACATGTCGAAGCTCGACCTGGACGACTCCCT
CACGCTCACTGCGGAGCCCAACGACCTCTGCTTTCTGGAGCGCGTCCTGG
TCGGCAGTCTGGCCAGAGGGCAACGCAAGGTCGTCCCACTCCAGCTCCGG
GTCAGGAGCTCACTGACCATGCCCTACGAGGACGCGATCCCAGAGAGATA
TGTCCTCACCCTCAGCCACGCCTCTCCTTCCTCTCTCCCGCCTTCTTCCG
CCTCCTCCCCGCCCCCCGACCTGGAGATCCGCTACAGCTTCGAGAACTCC
TTCCGGTACTTCCTCAAGGGCCTCCCGGGCCTGGCCCCTCGACGTGTGGT
CAGCCTTCCCTGTCCGTCACCGCCCTCGCGCCCCCCGTCCTCCCCCCCTG
CCCGGCGCCGCCTCCCCGCGCCCTGCAACCTCGTGCTGGTGGGTCCTGCC
GGCGCGGGGAAGTCCACCCTGCTCGCCCACCTCCTCACGCTCGTCAGCGA
GCGGGAGCACGTCAATTTGGGCGGTGTGCGGACCTGCGCCACCTCCTCGC
ACGGGACCTTGGAGCTCCGCGCCTACCCCCTGCACCCGACCGTCTCGGCG
GTCTCCGTTTGGGACACCCGTGGCTTCACACCCAGCACCTACACGTGCGA
AGAGCTCGCCAATATTTTGGCGGGCGACTACCCGGAGCGGCGGTGGGACC
CGGTGGGGCGGGACGCGGGGAGGGAGGCGGAGGTGCGGGAAGAGGGGGGG
GCGACCCGAGCCCTGCGGGAGCAGCAGGCCTGTGTGGTGGTCCTCCCGGA
GGGGATCCTTCAGTCCGCGGTGGAGCTGGACCAGCTCCGCCGGCAGCTGG
AGCTGGTGCAGCGGGCAGGCCTGAACCCCTTGGTCCTGCTCACCCACGTG
GACCTGGCCTACCCCAGCCTGCGGGCGGACCCGTCGGGGCGTGGGGTGGG
GGAGCTGGGGGAGGCGAGGCGGGAGGCGGCCCGGCAGCTGGGGGTGGAGG
CGAACCGCGTCCTGCACATGGTGCCCTACAAGGACGAGGAGACCAGAGCC
GTACATGCGGGGGGGGGTGCTCTGAGCGCTTCTCCATCGACCGCTTGGTT
TACAAGGTCCTGGCCAAGGCGCTACAGCTGGCTGCCGAGTACGTGGAGTC
GCACCCTGAGGGCGCCCGGGAGGAGGGCCCAGGTCAGGAGGCAGTCCCCT
TGCGCTCCTTGTTCGGCGTCTCCCACGCCTGGCCGGCCTTTCTGGAGGCG
GAGGACTCTGCCCCGGACGCCCTCCATGGCCTGCTCCAGCACGTCGTCCA
CCCCTAGACTGTCCTCCTCGACATTTGTCACGCCCTTTGACTCCTCGTCG
CGGGTAGAGGGCGTCGGACGCTCCCATCAAAGCACCGAGCTCCTTGCCAG
GCGCGTGTCCGGTGTGCGCATCGACCTTTCTCCCCCTTCCCCGCCCATCT
CTTCCTCCACGCGCCCAGGCGACGGGATGTCGCCCCTTTTATCCAACGCC
CAATCGTTCCAAAACCAGTTGCACCGTCATTCTCGGCAATCCTCAACATG
CAGCGGCAACGACACCCTCTCGGCCTCCTCCTCCTCTACCTCCTCCTCCT
CCTCGCCCTTTCCGGCCCTTCTCAAGGCCTTCAACCCCCAAGAGGTACAG
GTGGAGGTGGAGTGCGAACCTGCGGCCATCGGAGACAGGGTCCTCCTCCG
CAGCATCATCATCCACAACATGTCGAAGCTCGACCTGGACGACTCCCTCA
CGCTCACTGCGGAGCCCAACGACCTCTGCTTTCTGGAGCGCGTCCTGGTC
GGCAGTCTGGCCAGAGGGCAACGCAAGGTCGTCCCACTCCAGCTCCGGGT
CAGGAGCTCACTGACCATGCCCTACGAGGACGCGATCCCAGAGAGATATG
TCCTCACCCTCAGCCACGCCTCTCCTTCCTCTCTCCCGCCTTCTTCCGCC
TCCTCCCCGCCCCCCGACCTGGAGATCCGCTACAGCTTCGAGAACTCCTT
CCGGTACTTCCTCAAGGGCCTCCCGGGCCTGGCCCCTCGACGTGTGGTCA
GCCTTCCCTGTCCGTCACCGCCCTCGCGCCCCCCGTCCTCCCCCCCTGCC
CGGCGCCGCCTCCCCGCGCCCTGCAACCTCGTGCTGGTGGGTCCTGCCGG
CGCGGGGAAGTCCACCCTGCTCGCCCACCTCCTCACGCTCGTCAGCGAGC
GGGAGCACGTCAATTTGGGCGGTGTGCGGACCTGCGCCACCTCCTCGCAC
GGGACCTTGGAGCTCCGCGCCTACCCCCTGCACCCGACCGTCTCGGCGGT
CTCCGTTTGGGACACCCGTGGCTTCACACCCAGCACCTACACGTGCGAAG
AGCTCGCCAATATTTTGGCGGGCGACTACCCGGAGCGGCGGTGGGACCCG
GTGGGGCGGGACGCGGGGAGGGAGGCGGAGGTGCGGGAAGAGGGGGGGGC
GACCCGAGCCCTGCGGGAGCAGCAGGCCTGTGTGGTGGTCCTCCCGGAGG
GGATCCTTCAGTCCGCGGTGGAGCTGGACCAGCTCCGCCGGCAGCTGGAG
CTGGTGCAGCGGGCAGGCCTGAACCCCTTGGTCCTGCTCACCCACGTGGA
CCTGGCCTACCCCAGCCTGCGGGCGGACCCGTCGGGGCGTGGGGTGGGGG
AGCTGGGGGAGGCGAGGCGGGAGGCGGCCCGGCAGCTGGGGGTGGAGGCG
AACCGCGTCCTGCACATGGTGCCCTACAAGGACGAGGAGACCAG back to top
|