EWM22693.1, cds7974 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22693.1 vs. NCBI_GenBank
Match: gi|585103261|gb|EWM22693.1| (hypothetical protein Naga_100340g8 [Nannochloropsis gaditana]) HSP 1 Score: 1127.08 bits (2914), Expect = 0.000e+0 Identity = 565/565 (100.00%), Postives = 565/565 (100.00%), Query Frame = 0
Query: 1 MACSSTSSTPRLSSSTFVTPFDSSSRVEGVGRSHQSTELLARRVSGVRIDLSPPSPPISSSTRPGDGMSPLLSNAQSFQNQLHRHSRQSSTCSGNDTLSASSSSTSSSSSPFPALLKAFNPQEVQVEVECEPAAIGDRVLLRSIIIHNMSKLDLDDSLTLTAEPNDLCFLERVLVGSLARGQRKVVPLQLRVRSSLTMPYEDAIPERYVLTLSHASPSSLPPSSASSPPPDLEIRYSFENSFRYFLKGLPGLAPRRVVSLPCPSPPSRPPSSPPARRRLPAPCNLVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEGAREEGPGQEAVPLRSLFGVSHAWPAFLEAEDSAPDALQPYMRGGVL 565
MACSSTSSTPRLSSSTFVTPFDSSSRVEGVGRSHQSTELLARRVSGVRIDLSPPSPPISSSTRPGDGMSPLLSNAQSFQNQLHRHSRQSSTCSGNDTLSASSSSTSSSSSPFPALLKAFNPQEVQVEVECEPAAIGDRVLLRSIIIHNMSKLDLDDSLTLTAEPNDLCFLERVLVGSLARGQRKVVPLQLRVRSSLTMPYEDAIPERYVLTLSHASPSSLPPSSASSPPPDLEIRYSFENSFRYFLKGLPGLAPRRVVSLPCPSPPSRPPSSPPARRRLPAPCNLVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEGAREEGPGQEAVPLRSLFGVSHAWPAFLEAEDSAPDALQPYMRGGVL
Sbjct: 1 MACSSTSSTPRLSSSTFVTPFDSSSRVEGVGRSHQSTELLARRVSGVRIDLSPPSPPISSSTRPGDGMSPLLSNAQSFQNQLHRHSRQSSTCSGNDTLSASSSSTSSSSSPFPALLKAFNPQEVQVEVECEPAAIGDRVLLRSIIIHNMSKLDLDDSLTLTAEPNDLCFLERVLVGSLARGQRKVVPLQLRVRSSLTMPYEDAIPERYVLTLSHASPSSLPPSSASSPPPDLEIRYSFENSFRYFLKGLPGLAPRRVVSLPCPSPPSRPPSSPPARRRLPAPCNLVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEGAREEGPGQEAVPLRSLFGVSHAWPAFLEAEDSAPDALQPYMRGGVL 565
BLAST of EWM22693.1 vs. NCBI_GenBank
Match: gi|553185963|ref|XP_005854338.1| (hypothetical protein NGA_0186400, partial [Nannochloropsis gaditana CCMP526] >gi|422294722|gb|EKU22022.1| hypothetical protein NGA_0186400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1105.51 bits (2858), Expect = 0.000e+0 Identity = 558/563 (99.11%), Postives = 559/563 (99.29%), Query Frame = 0
Query: 1 MACSSTSSTPRLSSSTFVTPFDSSSRVEGVGRSHQSTELLARRVSGVRIDLSPPSPPISSSTRPGDGMSPLLSNAQSFQNQLHRHSRQSSTCSGNDTLSASSSSTSSSSSPFPALLKAFNPQEVQVEVECEPAAIGDRVLLRSIIIHNMSKLDLDDSLTLTAEPNDLCFLERVLVGSLARGQRKVVPLQLRVRSSLTMPYEDAIPERYVLTLSHASPSSLPPSSASSPPPDLEIRYSFENSFRYFLKGLPGLAPRRVVSLPCPSPPSRPPSSPPARRRLPAPCNLVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEGAREEGPGQEAVPLRSLFGVSHAWPAFLEAEDSAPDALQPYMRGG 563
MACSSTSSTPRLSSSTFVTPFDSSSRVEGVGRSHQSTELLARRVSGVRIDLSPPSPPISSSTRPGDGMSPLLSNAQSFQNQLHRHSRQSSTCSGNDTLSASSSSTSSSSSPFPALLKAFNPQEVQVEVECEPAAIGDRVLLRSIIIHNMSKLDLDDSLTLTAEPNDLCFLERVLVGSLARGQRKVVPLQLRVRSSLTMPYEDAIPERYVLTLSHASPSSLPPSSASSPPPDLEIRYSFENSFRYFLKGLPGLAPRRVVSLPCPSPPSRPPSSPPARRRLPAPCNLVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEGAREEGPGQEAVPLRSLFGVSHAWPAFLEAEDSAPDAL+ R G
Sbjct: 43 MACSSTSSTPRLSSSTFVTPFDSSSRVEGVGRSHQSTELLARRVSGVRIDLSPPSPPISSSTRPGDGMSPLLSNAQSFQNQLHRHSRQSSTCSGNDTLSASSSSTSSSSSPFPALLKAFNPQEVQVEVECEPAAIGDRVLLRSIIIHNMSKLDLDDSLTLTAEPNDLCFLERVLVGSLARGQRKVVPLQLRVRSSLTMPYEDAIPERYVLTLSHASPSSLPPSSASSPPPDLEIRYSFENSFRYFLKGLPGLAPRRVVSLPCPSPPSRPPSSPPARRRLPAPCNLVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEGAREEGPGQEAVPLRSLFGVSHAWPAFLEAEDSAPDALREEPREG 605
BLAST of EWM22693.1 vs. NCBI_GenBank
Match: gi|470524214|ref|XP_004356453.1| (hypothetical protein ACA1_171260 [Acanthamoeba castellanii str. Neff] >gi|440803670|gb|ELR24553.1| hypothetical protein ACA1_171260 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 102.064 bits (253), Expect = 5.226e-20 Identity = 79/247 (31.98%), Postives = 122/247 (49.39%), Query Frame = 0
Query: 269 PPSSPPARRRLPAPCNLVLVGPAGAGKSTLLAHLLTLVSE-REHVNLGGVRTCATSSHGTLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDA--GREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQ-RAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAE 511
PP+ A+ ++ L G AGAGKS + +LTL S V GV CA H T +L Y + A+ DT G T +TY ++L N++ G +P R W G D + A+ + +TR R + ++ L E + ++ +Q +A NPLVL++ VD P+ R++P G E+ +++ LG+ NRV +V YKDE R F IDR Y+++ AL+ A+E
Sbjct: 111 PPTGAVAKYKV------CLFGLAGAGKSAFVNAVLTLASSGMSVVETAGVGGCA--RHNTRQLATYTIDGENFALV--DTWGLTLTTYLNDDLENVVDGVFP-RNW---GMDMIYDQHAKAIRDNASTRPERAVHVILFMITHSALDKNDECELIKANYARLQDKAARNPLVLISKVDEIVPAFRSNPLG-DYPEVRALKQKVTDLLGIPENRVYAVVNYKDESERSFQIDRNTYRIVEHALRTASE 342
BLAST of EWM22693.1 vs. NCBI_GenBank
Match: gi|551584663|ref|XP_005777694.1| (hypothetical protein EMIHUDRAFT_237890 [Emiliania huxleyi CCMP1516] >gi|485629971|gb|EOD25265.1| hypothetical protein EMIHUDRAFT_237890 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 82.8037 bits (203), Expect = 5.531e-13 Identity = 76/245 (31.02%), Postives = 110/245 (44.90%), Query Frame = 0
Query: 284 NLVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHG-----TLELRAYPLHPTVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRW------DPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQ--SAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVES 515
N+++ G G+GK++ +L L+S H N G CA HG T+ LRA P + VWDT+G TP Y EL I+ G P W DP ++ V A R R A V +LP L + ++R Q + R G+NP+VL+ +D A ++R +PS A + AA LG+ V + Y D ++ F IDR + VL + L +A ES
Sbjct: 129 NVLVFGVMGSGKTSFTNSILALMS---HANSGEALPCAEPVHGGGDHCTVTLRAIDF-PNELPLRVWDTKGLTPENYKGPELEAIMKGKLP-HGWDMDCHIDPAMLSESQDLTVE----AKRFGRTPHAVVFMLPFSELDDTDGEFMQKIRDQFGKIVRLGINPIVLVAKLDEADDAVRKNPSSSN-STKDAALKAAADFLGIPFGNVYPCINYLDLTSKSFEIDRNLAVVLHRILSMAKHRCES 363
BLAST of EWM22693.1 vs. NCBI_GenBank
Match: gi|470374762|ref|XP_004333127.1| (von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440789822|gb|ELR11114.1| von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 68.5514 bits (166), Expect = 2.085e-8 Identity = 64/256 (25.00%), Postives = 115/256 (44.92%), Query Frame = 0
Query: 268 RPPSSPPARRRLPAPC-NLVLVGPAGAGKSTLLAHLLTLVSER--EHVNLGGVRTCATSSHGTLELRAYPLHP----TVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESH 516
RPPS PA C N+++ G G+GKS+ +L+ S++ ++ +GG H T + R + L T + +++WD+ G TY + L +L GD P ++ V A+ R+ + R ++ +P IL+ +V L +++ L L + LN V++T RAD G + A++L + RV + Y + F ID++ +V A + A +YV+++
Sbjct: 357 RPPS--------PATCLNILMFGVIGSGKSSFTNTILSAFSDQVMDNAQVGG-----DGDHCTTDYRRFHLGQLCGLTGTEIALWDSWGLDEETYGNDFLMTLLRGDLPS-GYEMVNVSIVDGAK-RDPDNMHQVDRRIHGVLMFVPINILEDSVMLLRIKDALRLTNKMKLNAQVVVT---------RADTVS-GKQNRVTLQERIAKELNLAPLRVNLVKNYIKVRDKDFGIDKVALRVFADIVDTAHQYVKTY 587
BLAST of EWM22693.1 vs. NCBI_GenBank
Match: gi|1101521941|ref|XP_018926559.1| (PREDICTED: interferon-induced protein 44-like [Cyprinus carpio]) HSP 1 Score: 64.6994 bits (156), Expect = 1.354e-7 Identity = 59/247 (23.89%), Postives = 113/247 (45.75%), Query Frame = 0
Query: 285 LVLVGPAGAGKSTLLAHLLTLVSEREHVNLGGVRTCATSSHG----TLELRAYPLHPTVSA----VSVWDTRGFTPST---YTCEELANILAGDYPER-RWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRA----GLNPLVLLTHVDLAYPSLRADPSGRGVGELGEAR-REAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVE 514
++++GP GAGKS+ + + +G + + A S T + R YP+ + DT G T E++++IL G P+R +++P+ +E ++ +L+E+ CVV + + S + D+L+ +L ++R G+ +VL+T +D A P + D V +++ +E + LGV + VL + Y E + D L+ L + L A +Y++
Sbjct: 96 ILMIGPVGAGKSSFFNSI-------NSIFMGRITSKAMSGSAGTSLTTQFRTYPVKDGREGKPLPFVLCDTMGLEEQTGAGLDIEDISSILQGHIPDRYKFNPITPSQPKE----QKASRPASLKEKIHCVVYMIDTTKISLMS-DKLQEKLTTIRRKVNSLGITQMVLMTKIDEACPEVEKDLQSLYVSSYIKSKVQEVSSWLGVPVSCVLPVKNYSQELELELNCDVLLLTALQQMLNFADDYLD 330 The following BLAST results are available for this feature:
BLAST of EWM22693.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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