rna7989, rna7989 (mRNA) Nannochloropsis gaditana

Overview
Namerna7989
Unique Namerna7989
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length568
Alignment locationKK037247.1:295904..296563 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102248g1.7138.mrna
Orig protein idgnl|cribi|Naga_102248g1.7138
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:295904..296563 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102248g1gene7736Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7989rna7989-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22706.1cds7967Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7989 ID=rna7989|Name=rna7989|organism=Nannochloropsis gaditana|type=mRNA|length=568bp
GGGAAGGTGAATTGTGGGTGTTTCATGCCACACCTGAGTACTCCGCCCGT
TACATCCAGACCGAGCCCTTCCCCCAGGAAAAAGTCGTGTCCGATGTGTT
GCGCTCTTTTTCGGGGAAATTCGGGAGCGGCGAAGAAGGTGGCGGCACGC
GACAGGGAGGGAGGAAGAAACCGGCTTACGTCGCCGTCCAGCGTTGGCTG
TACTCGCAAACGGACAACCCGGCCAGGCCCTCGTACGGATGGGAAGAGGG
AGTGCGGCTGGGAGCTTGCGGGGACGGGTGGGAGGGAGGGAGGGTTGGGG
GGAGGGAGCAGAGGGCGTGGAGCGGGCGTGGTTGAGTGGAAAGGGGTTGG
GTGAGAGGATCGCCGCCTCCTTCACAAGGAAGAGCGGCTAACGAGGGCAA
GCGGATGGAGGGAAGAGAAGTACAGGGGAGGTGTCGAGGCACGGTGGAAA
AGTGGACTTTCAGTTGCAACTTTTGAATCAAAGAGGGCACAACAACCCTT
CTCTCCCGTGCGACATTGGTTTAAAAACTTCCCCACGCGTAAGGAAAATT
TCGACAAAATTTCGAACA
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protein sequence of rna7989

>rna7989-protein ID=rna7989-protein|Name=rna7989|organism=Nannochloropsis gaditana|type=polypeptide|length=111bp
MVVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQ
CHRPTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQT
LAVPALVLYCE
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mRNA from alignment at KK037247.1:295904..296563-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7989 ID=rna7989|Name=rna7989|organism=Nannochloropsis gaditana|type=mRNA|length=660bp|location=Sequence derived from alignment at KK037247.1:295904..296563- (Nannochloropsis gaditana)
ATGGTCGTGACCTCGGATTTCTACGTGGCTATCACCGGGCGCGACACCTC
CCTCTACCTGCACACCCTCTGGCTCTCCCTCCTCATCGTCCTAGCCGTGG
TCGTCTGCAAGGTGAGGTGGGGGACGAGAACGGGGCAGACACGTCGTGCA
CCGTGCGGTCAGTGTGACCTCCCTCCCTCCCTCCCTCCCTCCCTCAGACC
TTCAAGACCCTCTCTGTGGAGCTCCTGGCGCTCCAATGCCGTCGCTGCCT
TCAGCGGCACTTCCACGACCTGTACTTCATTCCGCCCTCCTTCCCCGCCT
CCACCCCTCCCTGCGCGATCGCCCATGTCCTGGACGAGGACAAGGGAGGG
GAGGAGGCCGGGAAGGAGGGCAGTGGCCAGAGGGGCGCCCGCCGACGGCA
CGGAGGGCGCGAAGGAGGGGGAGGGAGGGAGGGAGGGCGGGCGCCTACGC
CGTCCTCTACCCCGCACTCCCGGCGCAGACCGCCCAACCCTCCCGGGCAC
GAGCAGTGAGACCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCCCCCGTCG
ACAACCCCGATCAACGCCTGACGTCCGACCTGGAGATTTTTGGCGCGAAA
CTGGCGGAGCTGATCGGGCAGACCCTGGCTGTCCCGGCCTTGGTCTTGTA
CTGTGAGTAG
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Coding sequence (CDS) from alignment at KK037247.1:295904..296563-

>rna7989 ID=rna7989|Name=rna7989|organism=Nannochloropsis gaditana|type=CDS|length=1008bp|location=Sequence derived from alignment at KK037247.1:295904..296563- (Nannochloropsis gaditana)
ACCGCCCAACCCTCCCGGGCACGAGCAGTGAGACCTCCCTCCCTCCCTCC
CTCCCTCCCTCCGCCCCCGTCGACAACCCCGATCAACGCCTGACGTCCGA
CCTGGAGATTTTTGGCGCGAAACTGGCGGAGCTGATCGGGCAGACCCTGG
CTGTCCCGGCCTTGGTCTTGTACTGTGAGTAGACCTTCAAGACCCTCTCT
GTGGAGCTCCTGGCGCTCCAATGCCATGGTCGTGACCTCGGATTTCTACG
TGGCTATCACCGGGCGCGACACCTCCCTCTACCTGCACACCCTCTGGCTC
TCCCTCCTCATCGTCCTAGCCGTGGTCGTCTGCAAGACCGCCCAACCCTC
CCGGGCACGAGCAGTGAGACCTCCCTCCCTCCCTCCCTCCCTCCCTCCGC
CCCCGTCGACAACCCCGATCAACGCCTGACGTCCGACCTGGAGATTTTTG
GCGCGAAACTGGCGGAGCTGATCGGGCAGACCCTGGCTGTCCCGGCCTTG
GTCTTGTACTGTGAGTAGACCTTCAAGACCCTCTCTGTGGAGCTCCTGGC
GCTCCAATGCCATGGTCGTGACCTCGGATTTCTACGTGGCTATCACCGGG
CGCGACACCTCCCTCTACCTGCACACCCTCTGGCTCTCCCTCCTCATCGT
CCTAGCCGTGGTCGTCTGCAAGACCGCCCAACCCTCCCGGGCACGAGCAG
TGAGACCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCCCCCGTCGACAACC
CCGATCAACGCCTGACGTCCGACCTGGAGATTTTTGGCGCGAAACTGGCG
GAGCTGATCGGGCAGACCCTGGCTGTCCCGGCCTTGGTCTTGTACTGTGA
GTAGACCTTCAAGACCCTCTCTGTGGAGCTCCTGGCGCTCCAATGCCATG
GTCGTGACCTCGGATTTCTACGTGGCTATCACCGGGCGCGACACCTCCCT
CTACCTGCACACCCTCTGGCTCTCCCTCCTCATCGTCCTAGCCGTGGTCG
TCTGCAAG
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Synonyms
Publications