EWM22706.1, cds7967 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22706.1 vs. NCBI_GenBank
Match: gi|585103280|gb|EWM22706.1| (hypothetical protein Naga_102248g1 [Nannochloropsis gaditana]) HSP 1 Score: 221.476 bits (563), Expect = 3.381e-73 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query: 1 MVVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHRPTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLYCE 111
MVVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHRPTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLYCE
Sbjct: 1 MVVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHRPTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLYCE 111
BLAST of EWM22706.1 vs. NCBI_GenBank
Match: gi|971509793|dbj|GAQ88416.1| (ABC transporter D family member 4 [Klebsormidium nitens]) HSP 1 Score: 58.151 bits (139), Expect = 1.368e-7 Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = 0
Query: 7 FYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCH-RPTLPGTSS--ETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLY 109
FY A+ D L+ +W SLL + +C K E+LALQ R TL S S L VDNPDQR+ ++++F LA+L+ +T+ P ++ Y
Sbjct: 97 FYKALLDNDVKLFASAMWRSLLWYSSAALCAGVKLGVSEMLALQWRKRLTLAAHSRYCRDSNVFHLMKEGAVDNPDQRVAQEIQLFSTGLAQLLHKTVVAPLMIAY 202
BLAST of EWM22706.1 vs. NCBI_GenBank
Match: gi|1178053898|gb|ORE09380.1| (P-loop containing nucleoside triphosphate hydrolase protein [Rhizopus microsporus var. microsporus]) HSP 1 Score: 58.151 bits (139), Expect = 1.557e-7 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 2 VVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHR---PTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLY 109
++ S+FY +T RD + ++ + LL+V AV CK+ EL A++ R L ++ + +L + VDNPDQR+T D++ F L ++I + P + +Y
Sbjct: 88 LIPSNFYTILTSRDLAGFIRYIPTCLLLVFAVATCKSLLKFMGELFAIKTRRLLTVHLQHRYIKSKMVYNLLMNQYVDNPDQRITQDVDKFAETLQQIITNLIIAPLMAIY 198
BLAST of EWM22706.1 vs. NCBI_GenBank
Match: gi|727140871|emb|CEG76689.1| (hypothetical protein RMATCC62417_11549 [Rhizopus microsporus]) HSP 1 Score: 57.7658 bits (138), Expect = 1.809e-7 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 2 VVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHR---PTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLY 109
++ S+FY +T RD + ++ + LL+V AV CK+ EL A++ R L ++ + +L + VDNPDQR+T D++ F L ++I + P + +Y
Sbjct: 88 LIPSNFYTILTSRDLAGFIRYIPTCLLLVFAVATCKSLLKFMGELFAIKTRRLLTVHLQHRYIKSKMVYNLLMNQYVDNPDQRITQDVDKFAETLQQIITNLIIAPLMAIY 198
BLAST of EWM22706.1 vs. NCBI_GenBank
Match: gi|729708054|emb|CEI95473.1| (hypothetical protein RMCBS344292_09658 [Rhizopus microsporus]) HSP 1 Score: 57.7658 bits (138), Expect = 2.119e-7 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 2 VVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHR---PTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLY 109
++ S+FY +T RD + ++ + LL+V AV CK+ EL A++ R L ++ + +L + VDNPDQR+T D++ F L ++I + P + +Y
Sbjct: 104 LIPSNFYTILTSRDLAGFIRYIPTCLLLVFAVATCKSLLKFMGELFAIKTRRLLTVHLQHRYIKSKMVYNLLMNQYVDNPDQRITQDVDKFAETLQQIITNLIIAPLMAIY 214
BLAST of EWM22706.1 vs. NCBI_GenBank
Match: gi|727142877|emb|CEG74771.1| (hypothetical protein RMATCC62417_09926 [Rhizopus microsporus]) HSP 1 Score: 57.7658 bits (138), Expect = 2.119e-7 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 2 VVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHR---PTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLY 109
++ S+FY +T RD + ++ + LL+V AV CK+ EL A++ R L ++ + +L + VDNPDQR+T D++ F L ++I + P + +Y
Sbjct: 104 LIPSNFYTILTSRDLAGFIRYIPTCLLLVFAVATCKSLLKFMGELFAIKTRRLLTVHLQHRYIKSKMVYNLLMNQYVDNPDQRITQDVDKFAETLQQIITNLIIAPLMAIY 214
BLAST of EWM22706.1 vs. NCBI_GenBank
Match: gi|1178068333|gb|ORE22726.1| (P-loop containing nucleoside triphosphate hydrolase protein [Rhizopus microsporus]) HSP 1 Score: 57.7658 bits (138), Expect = 2.204e-7 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 2 VVTSDFYVAITGRDTSLYLHTLWLSLLIVLAVVVCKTFKTLSVELLALQCHR---PTLPGTSSETSLPPSLPPSAPVDNPDQRLTSDLEIFGAKLAELIGQTLAVPALVLY 109
++ S+FY +T RD + ++ + LL+V AV CK+ EL A++ R L ++ + +L + VDNPDQR+T D++ F L ++I + P + +Y
Sbjct: 88 LIPSNFYTILTSRDLAGFIRYIPTCLLLVFAVAACKSLLKFMGELFAIKTRRLLTVHLQHRYIKSKMVYNLLMNQYVDNPDQRITQDVDKFAETLQQIITNLIIAPLMAIY 198 The following BLAST results are available for this feature:
BLAST of EWM22706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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