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Properties
| Property Name | Value |
|---|
| Product | Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site |
| Orig transcript id | gnl|cribi|Naga_100639g2.5887.mrna |
| Orig protein id | gnl|cribi|Naga_100639g2.5887 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:280825..283633 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7983 ID=rna7983|Name=rna7983|organism=Nannochloropsis gaditana|type=mRNA|length=968bp
ATTTTAAAGAGCGTATATAATGCTTGCGTTGCAGTCACGGGCCATTGATC
ACTCTTCTAAAGCAGTCAAAGCCGACAGGGCAGGAGAAAGGCGCCGGGCC
TTTTTCCATTATAAGGAAAGTCTTGTACATCTGATAGAATGGTTAAAGCT
GGAGAAGGCGGCCACTGCGCGAGACGCATTGAAGGTGAAGATTCATGGCT
ACATGACACGTGCGGAAGAGCTTAAAATGCTCTTGGATATAGGAAATGGG
GCGCGTAGAACAACATCTGAGGTTGAATGCTCCTCGTCCCCCATTACCAC
GCGAGCAGACACGATAACAGAATACTTGTGCGCGAATAGGAATCAGAGAA
GTGATGAGTGCGAAGGATGCGACTCTCAACAAGCATCGTTTCTTGAAGGT
CCTTTTACTATGAATTTCGACGCAGAAGACACGCTTAGAAGGCCAAATGA
ACGAATGTCTCTTAGCGAAGATGACACCAAAAAAGAGAATAAATTTTAAT
GGGATTACAAGCACCCAATCAAGCATTCACCCCTTTCCTATCAGAGGCAA
CCCTGTCAATGCCTTCGCATGGCTCGATTATGAGTGCACGGCACTGTACG
CATTGTTAAAGATGTACTTGAAGAACTAGAAGAGAAGTTGAGGGAATGGG
AGGCATTAATGGAAAAGAATCCGGAAATCCGGAGCAGATTGAGGGAGGTG
ACAACATTCTTTTGTCATGCAAGACAAAATACATCATTTTATTTGCCAAG
TGTTGTTAAAAGCATTAAGTGCGACTGATGAACATGAGATGTGTCGCGTG
ACAGAGTATGGCTTGGAAATCGCAAAGATTTAGCAACATGCGATGCTGCG
GTCGAATTGGCAGCCAATACCAATTTATGACCAAACGTTTCTCAGCCTTC
AACACCAAGACATGCCTTCTTAAAGGAGAGGACCCAGATCTTGTCATGGC
AATTGGCCTTATGGTTCT back to topprotein sequence of rna7983 >rna7983-protein ID=rna7983-protein|Name=rna7983|organism=Nannochloropsis gaditana|type=polypeptide|length=628bp
MVPCPDGDRPRTIASKCTHTILQFMLMQEQARGQGINSRCPRPPYLSGPT
PCLFNLPPLAPPMPPVPPASPPALRPPSPLSLARIDQEQYHSATIASVPP
EIAARIARSEARAERSKRRGSRGVELPENDVRRQIGCRLMNLGNSCYQNC
ILQILVNLPDVRQRLVEFAAGHTACEEDYCFPRDLSRHAVDVPVAAAKGQ
ALSASWVLKYQQAGEGVIGDLYRQSDPACFLHGAADWCVDRAAGPAHALP
LFHDLFEGAAFEHEWVDPASFPRCPVQPKNLHSQPFLMLNIPVPASPSSV
MACLRASVFEDKVVTGRECEEEGCPYGRPAARSPPSMRKEREEAGREESA
GGRGRRTPPPVKGGRGGGAGEGSATTPMRRSSPAPPSPRPPLSPRCSPSP
PARHDKHQQLRLAHLPRYVCLRLLRFDNSLKKIRTPVAYEETIDFGHFVS
REQEAGTTKREGGAEAHGGAGVGGKRKRRESVKGEGERVVLSLNAEGGEA
AGGQGLKGEEQGVRGPSEYELMSVVLHQGRTRQRGHYYLYQRVLEGVEGG
GESGKWWLFDDAKRYQEVEACRVLRASDEVYMLVYRRRDRAEKGGRGRGR
GKGKGRSSSKGMEKTSSERKKGRHRYEY back to topmRNA from alignment at KK037247.1:280825..283633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7983 ID=rna7983|Name=rna7983|organism=Nannochloropsis gaditana|type=mRNA|length=2809bp|location=Sequence derived from alignment at KK037247.1:280825..283633- (Nannochloropsis gaditana)
TCTTGTCGTGTTGACGTCTCGCAGGCGGGGGCACGTCGAGGCTATGGTCC
CTTGCCCCGACGGCGACCGCCCACGTACCATCGCATCGAAGTGCACTCAC
ACGATTCTCCAATTCATGTTAATGCAAGAGCAGGCGCGGGGTCAGGGCAT
TAACTCCCGTTGTCCTCGTCCGCCTTACCTTAGTGGGCCGACTCCCTGCC
TCTTCAACCTCCCCCCCCTCGCTCCACCCATGCCGCCCGTCCCCCCCGCT
TCCCCCCCCGCTCTTCGGCCACCTTCCCCGCTTTCTCTCGCCCGTATCGA
TCAGGAGCAGTACCATTCGGCGACAATTGCCTCTGTGCCTCCTGAAATTG
CGGCAAGAATCGCACGATCGGAAGCGCGGGCTGAACGGAGCAAGCGCCGC
GGGTCGCGGGGGGTTGAGCTACCTGAAAACGACGTACGACGGCAGATCGG
TTGCCGTCTTATGAATTTGGGTAATTCATGCTACCAAAATTGTATTTTAC
AAATCCTGGTCAACCTTCCAGACGTGCGCCAGCGGCTCGTCGAATTTGCA
GCAGGACATACGGTAGGAAAAGGGGGGCCAACGGGGTAGGCAGCTCTTTC
TTACCTCCATCCGCCTGCGTCCCTTCAGTCGAGTGCCACCGCCATGCTGG
TGCCAATCTCACGCCTCGTGTGCCTTCCCTTGACCCCCGCCTCTCCCAGG
CCTGCGAGGAAGACTACTGCTTCCCCCGGGACCTGAGCCGGCACGCGGTG
GACGTGCCCGTGGCCGCCGCCAAGGGCCAGGCCCTGTCTGCCAGCTGGGT
CCTCAAGTATCAGCAGGCGGGAGAGGGGGTGATCGGAGATCTCTACCGGC
AGAGCGACCCCGCCTGCTTCCTCCACGGGGCCGCGGATTGGTGTGTTGAC
CGGGCCGCCGGGCCTGCCCACGCCCTCCCCCTCTTCCACGACCTCTTCGA
GGGGGCGGCCTTCGAGCACGAGTGGGTGGACCCCGCCTCGTTCCCGCGCT
GCCCCGTCCAGCCCAAGAACCTGCACTCCCAGCCCTTCCTCATGCTGAAC
ATCCCCGTGCCCGCCTCGCCCTCCTCGGTGATGGCCTGTCTGCGGGCGAG
TGTCTTCGAGGACAAGGTGGTCACGGGCCGGGAGTGCGAGGAGGAAGGAT
GCCCCTACGGGCGGCCGGCGGCTCGGTCGCCCCCTTCAATGCGGAAGGAG
CGGGAGGAGGCGGGGCGGGAGGAGAGTGCGGGAGGAAGGGGCAGGAGGAC
GCCCCCGCCGGTGAAGGGAGGACGGGGGGGAGGGGCCGGAGAAGGGAGCG
CGACGACCCCCATGCGACGCTCTTCTCCCGCCCCTCCCTCTCCGCGGCCT
CCTCTCTCTCCCCGCTGCTCTCCGTCTCCTCCTGCCCGGCACGACAAACA
CCAGCAGTTGCGCTTGGCCCACCTGCCCCGGTACGTGTGCCTGCGGCTCC
TCCGTTTCGACAACTCTTTGAAGAAGATCAGGACGCCGGTCGCGTACGAG
GAGACCATTGACTTTGGGCACTTTGTATCCAGAGAGCAGGAAGCGGGGAC
GACGAAGAGGGAGGGAGGGGCCGAAGCGCACGGGGGGGCGGGGGTGGGGG
GGAAGAGGAAGAGGAGGGAGAGCGTGAAGGGAGAAGGAGAAAGGGTCGTT
CTCAGCTTGAACGCCGAGGGAGGAGAAGCGGCGGGAGGACAGGGATTGAA
AGGCGAGGAGCAAGGCGTGCGGGGCCCGTCTGAGTATGAGCTCATGTCAG
TGGTTCTCCACCAAGGCCGCACGCGTCAGCGCGGGCACTACTACCTGTAT
CAGAGGGTTTTGGAGGGGGTAGAGGGAGGGGGGGAGAGCGGCAAGTGGTG
GCTGTTTGACGACGCCAAGCGGTATCAGGAGGTGGAAGCGTGTCGGGTTT
TGCGGGCCTCGGACGAGGTTTACATGCTTGTGTACAGGCGGAGGGACAGG
GCCGAGAAGGGGGGGCGGGGGCGGGGAAGGGGGAAGGGGAAGGGGAGGAG
CAGCAGCAAGGGGATGGAAAAGACGTCAAGCGAGAGAAAGAAGGGGAGGC
ATCGATACGAATACTAGGCGGCGAGAAGTGCCGCCCTGCCTTGTCCTCTC
CCTCCATCTCTTCCTCACCCTCTTCCACTTCCTCCCTCTCCTCCTCCTCC
ACGTCTTCTTCGTCCGCGTCGGCGGGGACCTCCACGTCAGCAGCAACGGT
CCTTTCCACCGGTGCGTCGGCATTGCGATGCGAGCGGGCTGAAAACAAAG
CACCGACCAGCTCGGGTCGGCTTTTCTCGGGCCCTGTCCGCAAACGGCCC
CGCCCCCTGAGTGTTCCTGTAACGGTCATGACGGACCTGGGCAACGCATG
GGATACAGCAGGGGAGGAAGCCCCAGGGGAGGAGGCAATTGCTTTGAAAA
ATCATGATTGTAAGAGGGGAAGGAGGAGTGGGAAAGGAGATGAGCCAAAG
GAGGACGCTGTACAGAAGTATGGAATCCAACCAAAAGCGGCAGTGACGCC
GAGACGGAAACGAGCGGCCTCGCGTTGACCAGAAAATGACGAGAGACGGG
GCATATTCTTGAAAGCAATTGTTATTCGTCTTAATGCAAATCGTCGTGAA
GAAAAATTGACAACTTTCCTTTTTCTTCCATTTTCTGTGGGCGGTTAAAA
AGCTTTGCAACGTGTGTGACGGGAAGATCGGAACGGGGAAACACAAACTT
CAAGAAGCAACGCAGCTATTCTCCATAGGATTTATGCTCCATGCTTCTTA
AATGCCTGCAAATCAAAGAAATAGGGTAGAACGCCTAATTTTGATAACCT
TCCTTACCC back to topCoding sequence (CDS) from alignment at KK037247.1:280825..283633- >rna7983 ID=rna7983|Name=rna7983|organism=Nannochloropsis gaditana|type=CDS|length=3774bp|location=Sequence derived from alignment at KK037247.1:280825..283633- (Nannochloropsis gaditana)
GCCTGCGAGGAAGACTACTGCTTCCCCCGGGACCTGAGCCGGCACGCGGT
GGACGTGCCCGTGGCCGCCGCCAAGGGCCAGGCCCTGTCTGCCAGCTGGG
TCCTCAAGTATCAGCAGGCGGGAGAGGGGGTGATCGGAGATCTCTACCGG
CAGAGCGACCCCGCCTGCTTCCTCCACGGGGCCGCGGATTGGTGTGTTGA
CCGGGCCGCCGGGCCTGCCCACGCCCTCCCCCTCTTCCACGACCTCTTCG
AGGGGGCGGCCTTCGAGCACGAGTGGGTGGACCCCGCCTCGTTCCCGCGC
TGCCCCGTCCAGCCCAAGAACCTGCACTCCCAGCCCTTCCTCATGCTGAA
CATCCCCGTGCCCGCCTCGCCCTCCTCGGTGATGGCCTGTCTGCGGGCGA
GTGTCTTCGAGGACAAGGTGGTCACGGGCCGGGAGTGCGAGGAGGAAGGA
TGCCCCTACGGGCGGCCGGCGGCTCGGTCGCCCCCTTCAATGCGGAAGGA
GCGGGAGGAGGCGGGGCGGGAGGAGAGTGCGGGAGGAAGGGGCAGGAGGA
CGCCCCCGCCGGTGAAGGGAGGACGGGGGGGAGGGGCCGGAGAAGGGAGC
GCGACGACCCCCATGCGACGCTCTTCTCCCGCCCCTCCCTCTCCGCGGCC
TCCTCTCTCTCCCCGCTGCTCTCCGTCTCCTCCTGCCCGGCACGACAAAC
ACCAGCAGTTGCGCTTGGCCCACCTGCCCCGGTACGTGTGCCTGCGGCTC
CTCCGTTTCGACAACTCTTTGAAGAAGATCAGGACGCCGGTCGCGTACGA
GGAGACCATTGACTTTGGGCACTTTGTATCCAGAGAGCAGGAAGCGGGGA
CGACGAAGAGGGAGGGAGGGGCCGAAGCGCACGGGGGGGCGGGGGTGGGG
GGGAAGAGGAAGAGGAGGGAGAGCGTGAAGGGAGAAGGAGAAAGGGTCGT
TCTCAGCTTGAACGCCGAGGGAGGAGAAGCGGCGGGAGGACAGGGATTGA
AAGGCGAGGAGCAAGGCGTGCGGGGCCCGTCTGAGTATGAGCTCATGTCA
GTGGTTCTCCACCAAGGCCGCACGCGTCAGCGCGGGCACTACTACCTGTA
TCAGAGGGTTTTGGAGGGGGTAGAGGGAGGGGGGGAGAGCGGCAAGTGGT
GGCTGTTTGACGACGCCAAGCGGTATCAGGAGGTGGAAGCGTGTCGGGTT
TTGCGGGCCTCGGACGAGGTTTACATGCTTGTGTACAGGCGGAGGGACAG
GGCCGAGAAGGGGGGGCGGGGGCGGGGAAGGGGGAAGGGGAAGGGGAGGA
GCAGCAGCAAGGGGATGGAAAAGACGTCAAGCGAGAGAAAGAAGGGGAGG
CATCGATACGAATACTAGATGGTCCCTTGCCCCGACGGCGACCGCCCACG
TACCATCGCATCGAAGTGCACTCACACGATTCTCCAATTCATGTTAATGC
AAGAGCAGGCGCGGGGTCAGGGCATTAACTCCCGTTGTCCTCGTCCGCCT
TACCTTAGTGGGCCGACTCCCTGCCTCTTCAACCTCCCCCCCCTCGCTCC
ACCCATGCCGCCCGTCCCCCCCGCTTCCCCCCCCGCTCTTCGGCCACCTT
CCCCGCTTTCTCTCGCCCGTATCGATCAGGAGCAGTACCATTCGGCGACA
ATTGCCTCTGTGCCTCCTGAAATTGCGGCAAGAATCGCACGATCGGAAGC
GCGGGCTGAACGGAGCAAGCGCCGCGGGTCGCGGGGGGTTGAGCTACCTG
AAAACGACGTACGACGGCAGATCGGTTGCCGTCTTATGAATTTGGGTAAT
TCATGCTACCAAAATTGTATTTTACAAATCCTGGTCAACCTTCCAGACGT
GCGCCAGCGGCTCGTCGAATTTGCAGCAGGACATACGGCCTGCGAGGAAG
ACTACTGCTTCCCCCGGGACCTGAGCCGGCACGCGGTGGACGTGCCCGTG
GCCGCCGCCAAGGGCCAGGCCCTGTCTGCCAGCTGGGTCCTCAAGTATCA
GCAGGCGGGAGAGGGGGTGATCGGAGATCTCTACCGGCAGAGCGACCCCG
CCTGCTTCCTCCACGGGGCCGCGGATTGGTGTGTTGACCGGGCCGCCGGG
CCTGCCCACGCCCTCCCCCTCTTCCACGACCTCTTCGAGGGGGCGGCCTT
CGAGCACGAGTGGGTGGACCCCGCCTCGTTCCCGCGCTGCCCCGTCCAGC
CCAAGAACCTGCACTCCCAGCCCTTCCTCATGCTGAACATCCCCGTGCCC
GCCTCGCCCTCCTCGGTGATGGCCTGTCTGCGGGCGAGTGTCTTCGAGGA
CAAGGTGGTCACGGGCCGGGAGTGCGAGGAGGAAGGATGCCCCTACGGGC
GGCCGGCGGCTCGGTCGCCCCCTTCAATGCGGAAGGAGCGGGAGGAGGCG
GGGCGGGAGGAGAGTGCGGGAGGAAGGGGCAGGAGGACGCCCCCGCCGGT
GAAGGGAGGACGGGGGGGAGGGGCCGGAGAAGGGAGCGCGACGACCCCCA
TGCGACGCTCTTCTCCCGCCCCTCCCTCTCCGCGGCCTCCTCTCTCTCCC
CGCTGCTCTCCGTCTCCTCCTGCCCGGCACGACAAACACCAGCAGTTGCG
CTTGGCCCACCTGCCCCGGTACGTGTGCCTGCGGCTCCTCCGTTTCGACA
ACTCTTTGAAGAAGATCAGGACGCCGGTCGCGTACGAGGAGACCATTGAC
TTTGGGCACTTTGTATCCAGAGAGCAGGAAGCGGGGACGACGAAGAGGGA
GGGAGGGGCCGAAGCGCACGGGGGGGCGGGGGTGGGGGGGAAGAGGAAGA
GGAGGGAGAGCGTGAAGGGAGAAGGAGAAAGGGTCGTTCTCAGCTTGAAC
GCCGAGGGAGGAGAAGCGGCGGGAGGACAGGGATTGAAAGGCGAGGAGCA
AGGCGTGCGGGGCCCGTCTGAGTATGAGCTCATGTCAGTGGTTCTCCACC
AAGGCCGCACGCGTCAGCGCGGGCACTACTACCTGTATCAGAGGGTTTTG
GAGGGGGTAGAGGGAGGGGGGGAGAGCGGCAAGTGGTGGCTGTTTGACGA
CGCCAAGCGGTATCAGGAGGTGGAAGCGTGTCGGGTTTTGCGGGCCTCGG
ACGAGGTTTACATGCTTGTGTACAGGCGGAGGGACAGGGCCGAGAAGGGG
GGGCGGGGGCGGGGAAGGGGGAAGGGGAAGGGGAGGAGCAGCAGCAAGGG
GATGGAAAAGACGTCAAGCGAGAGAAAGAAGGGGAGGCATCGATACGAAT
ACTAGATGGTCCCTTGCCCCGACGGCGACCGCCCACGTACCATCGCATCG
AAGTGCACTCACACGATTCTCCAATTCATGTTAATGCAAGAGCAGGCGCG
GGGTCAGGGCATTAACTCCCGTTGTCCTCGTCCGCCTTACCTTAGTGGGC
CGACTCCCTGCCTCTTCAACCTCCCCCCCCTCGCTCCACCCATGCCGCCC
GTCCCCCCCGCTTCCCCCCCCGCTCTTCGGCCACCTTCCCCGCTTTCTCT
CGCCCGTATCGATCAGGAGCAGTACCATTCGGCGACAATTGCCTCTGTGC
CTCCTGAAATTGCGGCAAGAATCGCACGATCGGAAGCGCGGGCTGAACGG
AGCAAGCGCCGCGGGTCGCGGGGGGTTGAGCTACCTGAAAACGACGTACG
ACGGCAGATCGGTTGCCGTCTTATGAATTTGGGTAATTCATGCTACCAAA
ATTGTATTTTACAAATCCTGGTCAACCTTCCAGACGTGCGCCAGCGGCTC
GTCGAATTTGCAGCAGGACATACG back to top
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