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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100641g2.3005.mrna |
| Orig protein id | gnl|cribi|Naga_100641g2.3005 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:275035..276778 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7979 ID=rna7979|Name=rna7979|organism=Nannochloropsis gaditana|type=mRNA|length=663bp
ATGAAGACAGTATTTGCTCTTGCTGCCCTCCTCCCATGCGCGGCTGGTTT
TGTGGCTCCGGTGGCCTTCCCCACAGCCTCCTCCGCAGGGAAAGCCGTGC
GAGGCCGCACTACCATGATGGCGGAACGATCCAAGTCCCTTCCCTTCCTG
ATGAAGCCCAAGAACTTGGACGGGTCCATGGCGGGTGACGTTGGCTTCGA
CCCCTTGGGCCTGTCAGAGATCAACGAAGTCGGCATCGACCTGTACTGGT
TGCGGGAGGCGGAACTCAAGCACTGCCGCCTCGGGATGATGGCCGCGGCC
GGCATTCTCTTCGTGGAGGCTGTGGGACCCGCCCCCGGTTTCCCCTCCAC
CAAGAGCCAAATGGATGCGTTCTGGACCGTGTACGCCGAGAAGCCTTCCC
TCGTGGGGGCGGCCTTGGTAGCTATTGCGATTTTGGAAGTGATCTCGGGT
GTCGCCACCACCCAGGGCCGTCAAAACGGGGACCGAGCGCCCGGCGACTA
CAACTTCGACCCCCTGGGCTTTGGAAAGGACCCCGCCAAGTTCAAAGACT
TGCAGCTCAAGGAAGTGAAGAACGGCCGCCTTGCCATGATTGCTGCCGCA
GGCATGATTCTTCAAGGTGTCTCCACTCACCAAGGTGCATTGCAAAACTT
GAACGGAAACTAG back to topprotein sequence of rna7979 >rna7979-protein ID=rna7979-protein|Name=rna7979|organism=Nannochloropsis gaditana|type=polypeptide|length=173bp
MMSGAHRGHRSLTPSLSPSSLLYSGAYLWRGRRWREGRRCKRQPRPQLPS
APLSESLMPFSFLFTLMHTVVWHPSLAVAATQVLVREVAAAAAAGWLVMG
ESSVLKGRHYLQLFILALLFMFAIFTRKSIWIYYTVFIIFAGMIFIVDIL
FQDFQFVYDPDPNNWRRKTDPQD back to topmRNA from alignment at KK037247.1:275035..276778- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7979 ID=rna7979|Name=rna7979|organism=Nannochloropsis gaditana|type=mRNA|length=1744bp|location=Sequence derived from alignment at KK037247.1:275035..276778- (Nannochloropsis gaditana)
AGCCCGCCCCATTGGGAAAGTGTGTGTATCAGCTCATTGAAGACTCACAC
GCCGTGCATTTCGCAAGCGCACTCATTGAGTTGAGACACAATCGTTGAGG
TCTCCCTCGGTGCACCTAGCAAGAAGCCGAGACGGGCCAGATTCTCACCT
GTGCGACATGATGTCGGGTGCGCACCGTGGCCACAGAAGTCTCACGCCAT
CGTTATCTCCTTCTTCCCTGTTGTATTCTGGTGCCTACCTCTGGCGTGGA
CGTCGGTGGAGAGAGGGAAGGAGGTGTAAGCGTCAACCCCGTCCTCAACT
CCCTTCAGCCCCTTTATCCGAGTCGCTCATGCCTTTCTCTTTTCTTTTCA
CGCTAATGCACACGGTCGTGTGGCATCCATCACTAGCAGTAGCTGCCACA
CAAGTCTTAGTGCGAGAAGTAGCCGCAGCAGCTGCAGCAGGGTGGTTGGT
CATGGGTGAAAGCAGTGTCCTCAAAGGCCGGCATTACTTGCAGCTTTTCA
TCCTGGCCCTTCTCTTTATGTTTGCCATATTCACCCGGAAGAGCATCTGG
ATCTACTATGTACGTATGTGCATGCACTCTTGTGATATATTTTCGCGTCT
ACTGGTATATTGTCCCAGGTATCCTCCCACGCCGGTCATATCGTGCGTAG
GAGAGAATACAGGCCGGGGGTGTATTTACCCTTGCCCACATTGACCTGTC
GAAGCCTTGTGTGGAATGCTTTTCTGCAACTTTGAAGAGCCAAAATTTAT
GTCTTGAGTCTGGCGGGCGCAGTGTCGACTTTTTCATGTTGAACAGAGGC
TCACAATCCTCATCGATATCCTCTCCGGTCCTCTCTCTACCCTCGCTCTG
TCCATCTGCAGACCGTCTTCATCATTTTTGCAGGGATGATCTTCATCGTC
GACATCCTTTTTCAAGATTTTCAATTTGTCTATGACCCCGACCCAAACGT
AAGACCTTGTGATGGATATCCCCCCTTCTGTCGCTCTCTCACCGATTTTG
CGCAACCCGTTGCATCTTCCCTTCCTTGTGTATGACACATACAAGTTGCT
TATCCCGTACGGCTCCCTGTCCCTGATACACCCTTTCTTTTCTCAATCCT
GCAGAATTGGCGTCGAAAGACAGACCCCCAAGATTAAATTATCTTCATGA
GGCGTGTGAGGAATTGCAGAGGGTAGAGAAGCAACAAATGTGATCAAGAG
GCAGTTTGGGGGCTTACGTGAAGCAAGAATAAAACTTTTTCACCGATGGA
GAGGAAATGTGTATTTTGACGGAATGGCGATCGAGAAGGTCGACGAAGCA
ATGGGAAAAGGGGCTGCGCTTCACGGCCCTTTCTTTTCGGTGCAAGGGCA
CACCATGGTACAGATAAGGGTTAATTCTATTTTGTCCTGGACCGGAATTG
GTTGCAGAATGAAAGATGACGGGTACAAATTCCTAGGCCCTGCGCTTCCG
GCTATTGAAAAAGTGAAAAGAAAATAATTGGACGCGTGCTTTACTCGTTT
GGCGCGATGAGGATTCAGAGTCGACGGAAAAAGCATGTAGGCTCTCACGA
GTATGTTCGACCTCGCACAGTGTATGCATGCATGCCTTTTGTTGTAAAAT
ACTCGCCAAATCCACGACGACGCTTCACGATCGTAATAGTCCGATGTGTA
CTTCTGGTTTCTAGCCCCCGACGCGCTCCATTTCCCAATTACACAAATCA
AGGGATGCCAAGCCAAAAAAAGAAGAACGAAGCCACGCGCTTGC back to topCoding sequence (CDS) from alignment at KK037247.1:275035..276778- >rna7979 ID=rna7979|Name=rna7979|organism=Nannochloropsis gaditana|type=CDS|length=1566bp|location=Sequence derived from alignment at KK037247.1:275035..276778- (Nannochloropsis gaditana)
AATTGGCGTCGAAAGACAGACCCCCAAGATTAAACCGTCTTCATCATTTT
TGCAGGGATGATCTTCATCGTCGACATCCTTTTTCAAGATTTTCAATTTG
TCTATGACCCCGACCCAAACATGATGTCGGGTGCGCACCGTGGCCACAGA
AGTCTCACGCCATCGTTATCTCCTTCTTCCCTGTTGTATTCTGGTGCCTA
CCTCTGGCGTGGACGTCGGTGGAGAGAGGGAAGGAGGTGTAAGCGTCAAC
CCCGTCCTCAACTCCCTTCAGCCCCTTTATCCGAGTCGCTCATGCCTTTC
TCTTTTCTTTTCACGCTAATGCACACGGTCGTGTGGCATCCATCACTAGC
AGTAGCTGCCACACAAGTCTTAGTGCGAGAAGTAGCCGCAGCAGCTGCAG
CAGGGTGGTTGGTCATGGGTGAAAGCAGTGTCCTCAAAGGCCGGCATTAC
TTGCAGCTTTTCATCCTGGCCCTTCTCTTTATGTTTGCCATATTCACCCG
GAAGAGCATCTGGATCTACTATAATTGGCGTCGAAAGACAGACCCCCAAG
ATTAAACCGTCTTCATCATTTTTGCAGGGATGATCTTCATCGTCGACATC
CTTTTTCAAGATTTTCAATTTGTCTATGACCCCGACCCAAACATGATGTC
GGGTGCGCACCGTGGCCACAGAAGTCTCACGCCATCGTTATCTCCTTCTT
CCCTGTTGTATTCTGGTGCCTACCTCTGGCGTGGACGTCGGTGGAGAGAG
GGAAGGAGGTGTAAGCGTCAACCCCGTCCTCAACTCCCTTCAGCCCCTTT
ATCCGAGTCGCTCATGCCTTTCTCTTTTCTTTTCACGCTAATGCACACGG
TCGTGTGGCATCCATCACTAGCAGTAGCTGCCACACAAGTCTTAGTGCGA
GAAGTAGCCGCAGCAGCTGCAGCAGGGTGGTTGGTCATGGGTGAAAGCAG
TGTCCTCAAAGGCCGGCATTACTTGCAGCTTTTCATCCTGGCCCTTCTCT
TTATGTTTGCCATATTCACCCGGAAGAGCATCTGGATCTACTATAATTGG
CGTCGAAAGACAGACCCCCAAGATTAAACCGTCTTCATCATTTTTGCAGG
GATGATCTTCATCGTCGACATCCTTTTTCAAGATTTTCAATTTGTCTATG
ACCCCGACCCAAACATGATGTCGGGTGCGCACCGTGGCCACAGAAGTCTC
ACGCCATCGTTATCTCCTTCTTCCCTGTTGTATTCTGGTGCCTACCTCTG
GCGTGGACGTCGGTGGAGAGAGGGAAGGAGGTGTAAGCGTCAACCCCGTC
CTCAACTCCCTTCAGCCCCTTTATCCGAGTCGCTCATGCCTTTCTCTTTT
CTTTTCACGCTAATGCACACGGTCGTGTGGCATCCATCACTAGCAGTAGC
TGCCACACAAGTCTTAGTGCGAGAAGTAGCCGCAGCAGCTGCAGCAGGGT
GGTTGGTCATGGGTGAAAGCAGTGTCCTCAAAGGCCGGCATTACTTGCAG
CTTTTCATCCTGGCCCTTCTCTTTATGTTTGCCATATTCACCCGGAAGAG
CATCTGGATCTACTAT back to top
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