rna797, rna797 (mRNA) Nannochloropsis gaditana

Overview
Namerna797
Unique Namerna797
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1509
Alignment locationCM002456.1:442107..442510 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100106g10.1447.mrna
Orig protein idgnl|cribi|Naga_100106g10.1447
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:442107..442510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100106g10gene763Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna797rna797-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29873.1cds797Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna797 ID=rna797|Name=rna797|organism=Nannochloropsis gaditana|type=mRNA|length=1509bp
ATGGGACGTGACGTAGTGCGCACATTCTTTCAATGCATTTCAAAATGCCC
ACGCACAAATAAAGGAGACAATCTGATAAAAACAGCAGTCGAGCAAAGTA
GCATGGCGGCGGATATAATGAACGACGTGGAGCCTACCAGTGCCCTGCTT
CCTACGCAGCCATCAACCCGAAACGGCCCACCCTCAGATTCCCCTCCTTC
TGCTGGTAAACTATCGCCTTTCTCTTCTGCTTTGGTTCCCATTCCCCGCA
ACCATATCGATAGTGGAGATGCAGAGGGTGACTGCGATACGGCACAGTAT
ATCATAAACTGCTTGCATTACAATATGGCTATCGATCCTTCCGTCGTCAT
CACCCTCCGCACCCGCTGGGCAACCATGCAGCCGACCAAAAGCTTCTGCG
AAGGATCTCTCCTACCCCTGGCAGGTATTCTGGATCGCAACAAATTCATC
CGCCGCCTGCATTTAAGTGGCGCCGGCGTCACAAACGTGAAAGCCACAGC
TGGTAATGGAGACAGCAACGCCCGTATTTTGCATCAAGTCCTGCTCAGCA
ACGACTCCATCAATATTCTCGATATTAGCAACACGGGCATAGATGACTCT
GGCCTAGCCGAGGTCTGTCAGGGCATGGCCGTTAATTCCGCTGTCACCAC
TTTGAATGTGGCGCGAAATTGTTTCTCAGCCCAAGGCGCTTTGATGCTGG
AAGATATGCTGCAGAAAAACACGCGCCTCAAATACCTGGATGTCTCTAGG
AACGCCCTGGGCTTCAAGTGTATCAACAGGTTGCAGTGCTGCGCCAAACT
CAGAAACGTGGAGATGAGAGTGGAAGGCAATTACGTCTTTGAAGAGATCC
TGAACAGCCTCACGCACGGTCTCGGCTTCATCGCATCTGTGGTCGGCACC
CTCCTCCTCATGTCAGCGGCGTCGGCGCCAGGAACCACGCCTTATCACTG
GTGGAGCTGTCTCCTTTTCTCGCTCTCCTTGATGATGCTCTACATCTCCT
CCTCCCTGTACCACTCATTCTTTATGCTCCCTCACGCGAAAGACGTGCTT
CAAATTCTCGATCATGTGGGAATCTACCTTCTTATCGCCGGTTCCTACTC
CCCTATCATGATGATTGCTCTGCATCACAGTCATCGAGCCAACCTCCTCC
TCCTCTTGGAATGGCTGACTGCATTCGGTGGAATCTGCGTCTCCATCGCG
TCCTCCGGCGTGGGAGTGTCAAACCAAGCCACTAACCTTGTGGAAGTTTT
TATTTTCCTAGGGATGGGTTGTGCGGCGTTTGGGATCTGGGATGACCTGG
TGGCGAATCTACCGGCAACCGCTCTCTATCTCCTTGTCGGAGGGGGCATG
GCCTACATTATTGGGGTTGTTTTCTTCATCTTGGGCGAGATCAAACCGAT
CTATCACATGGTGTGGCACATGTTTGTGATGCTTGGGAGTTTGCTGCATT
GGTTGTGCGTGTATCACTTCGTGGTTGGCATGGGTCTGGTTGCTACTCAG
CAAAGATGA
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protein sequence of rna797

>rna797-protein ID=rna797-protein|Name=rna797|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MFKIPRSGRAEGEDGNVSGGLHKLLALRSLEKKMTEERMRRCANDFACAY
TFDHQQASGTRHKKRLPPTRNNKELG
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mRNA from alignment at CM002456.1:442107..442510+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna797 ID=rna797|Name=rna797|organism=Nannochloropsis gaditana|type=mRNA|length=404bp|location=Sequence derived from alignment at CM002456.1:442107..442510+ (Nannochloropsis gaditana)
ATGTTCAAGATCcccaggagcgggagggccGAGGGTGGTAGTTGCCACGT
GACGTTCTAACGTGGCACATCTTGGtagcggagagggagggggttctGGG
AAGTAATCGACTGGGCGTGGGTCTTTGATACAGCTTTTGTCTTGCCATTT
GTGGTGGATGATGACACGTCCCGGCGACGCATCTATTGGCTGGACAAGGA
CCTTAAATAGAAGATGGGAACGTATCCGGCGGTCTCCACAAACTGTTGGC
TCTACGCAgtcttgaaaaaaaaatgacagAAGAGAGAATGAGACGCTGCG
CTAATGATTTTGCCTGCGCGTACACTTTCGATCACCAACAAGCATCGGGA
ACAAGACACAAAAAACGGCTTCCGCCAACAAGAAACAACAAGGAACTTGG
ATGA
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Coding sequence (CDS) from alignment at CM002456.1:442107..442510+

>rna797 ID=rna797|Name=rna797|organism=Nannochloropsis gaditana|type=CDS|length=462bp|location=Sequence derived from alignment at CM002456.1:442107..442510+ (Nannochloropsis gaditana)
ATGTTCAAGATCcccaggagcgggagggccGAGGGTGAAGATGGGAACGT
ATCCGGCGGTCTCCACAAACTGTTGGCTCTACGCAgtcttgaaaaaaaaa
tgacagAAGAGAGAATGAGACGCTGCGCTAATGATTTTGCCTGCGCGTAC
ACTTTCGATCACCAACAAGCATCGGGAACAAGACACAAAAAACGGCTTCC
GCCAACAAGAAACAACAAGGAACTTGGATGAATGTTCAAGATCcccagga
gcgggagggccGAGGGTGAAGATGGGAACGTATCCGGCGGTCTCCACAAA
CTGTTGGCTCTACGCAgtcttgaaaaaaaaatgacagAAGAGAGAATGAG
ACGCTGCGCTAATGATTTTGCCTGCGCGTACACTTTCGATCACCAACAAG
CATCGGGAACAAGACACAAAAAACGGCTTCCGCCAACAAGAAACAACAAG
GAACTTGGATGA
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Synonyms
Publications