EWM29873.1, cds797 (CDS) Nannochloropsis gaditana

Overview
NameEWM29873.1
Unique Namecds797
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:442107..442143 +
Alignment locationCM002456.1:442317..442510 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29873.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100106g10.1447.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:442107..442143 +
CM002456.1supercontigCM002456.1:442317..442510 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29873.1 vs. NCBI_GenBank
Match: gi|585112455|gb|EWM29873.1| (hypothetical protein Naga_100106g10 [Nannochloropsis gaditana])

HSP 1 Score: 159.844 bits (403), Expect = 9.220e-50
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 
Query:    1 MFKIPRSGRAEGEDGNVSGGLHKLLALRSLEKKMTEERMRRCANDFACAYTFDHQQASGTRHKKRLPPTRNNKELG 76
            MFKIPRSGRAEGEDGNVSGGLHKLLALRSLEKKMTEERMRRCANDFACAYTFDHQQASGTRHKKRLPPTRNNKELG
Sbjct:    1 MFKIPRSGRAEGEDGNVSGGLHKLLALRSLEKKMTEERMRRCANDFACAYTFDHQQASGTRHKKRLPPTRNNKELG 76
The following BLAST results are available for this feature:
BLAST of EWM29873.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112455|gb|EWM29873.1|9.220e-50100.00hypothetical protein Naga_100106g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna797rna797Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications