rna7964, rna7964 (mRNA) Nannochloropsis gaditana

Overview
Namerna7964
Unique Namerna7964
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length459
Alignment locationKK037247.1:237490..238949 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100209g9.4965.mrna
Orig protein idgnl|cribi|Naga_100209g9.4965
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:237490..238949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100209g9gene7713Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7964rna7964-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22739.1cds7942Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7964 ID=rna7964|Name=rna7964|organism=Nannochloropsis gaditana|type=mRNA|length=459bp
ATGGGAGGCATGATTGGAGACTGGCTTTCCCCTCCCTCTCCTTTACATTC
CCCTTTTCCCTCTTGGGGTACGATATTTCAAACCATCGTGGCAGTGGACG
CGCTCTTGGTGCTGTCCGGGAGCGTATTGACAGCTTATGTGGGAATAGGA
GGCTTAATCAGCAGACTGGCGATGGATCGGTGTTTCCCCTCCGTAGTCTT
GCGAACAAACGTGTGTCGTGGCACGTACACTGTGAGCATATGGAGCTTTT
TCTTGATAGCAGCGAGCCTTATACTCGTGCTGGATGACTCTGTCGAGGCG
TTAGCTGGTGTCTACGCGCTATCGTTCCTCGCTGTGATGGCTTTATTCGC
CATCGGCATCATGCTTCTCAAGGTCCTTCAATGCCCTCTCCCACATTTCT
TCTTTTCTCTGTGTTTCCTCCATATCTTTGTCCAGCACGCAAAATTTCGG
AACAATTGA
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protein sequence of rna7964

>rna7964-protein ID=rna7964-protein|Name=rna7964|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPS
EMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHK
DTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNR
HYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAG
KTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGN
KTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGT
RLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK
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mRNA from alignment at KK037247.1:237490..238949+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7964 ID=rna7964|Name=rna7964|organism=Nannochloropsis gaditana|type=mRNA|length=1460bp|location=Sequence derived from alignment at KK037247.1:237490..238949+ (Nannochloropsis gaditana)
ATGCCGCTTTTTGTTTCCTCCCGCTACTTGCTGTCGATCGCAACCGCCGT
CCTCTGCTTGACATCCTCTTTCAGCCACGCGAAGATTGTAGTTGAAGATA
ATTTCATCGACGAGACTACACGCGAAGCTCTCCTTGCACAGCTTCCGTCT
GAGATGCATCGTTTCAAACACACGGTCGATGTACCAGGCAACGTGTACAA
GCGCTTGCTTTCCGTGTTGCATCCTGAAAACTCCGAAGTATTTCCTTCCC
AGCTCACTGCACCGGCCAAAGGACAGAAAGGTATGGTCGCCGCTCACAAA
GATACATTCGAGGACAGTTCTCTGGCAGACAGGCAGGTGGGCTTGGTGTA
CCTGGAAGGGGATGGCCGCATGCAATTGAAAAACGATGTGACCGGAGAGG
AAACGATTATCGACGTCAAGCCTGGCCGATTCCTGTCGTGGGATAACCGT
CATTATACTCACCAGCTTCTTGCGGGTAGCATGCCACGGCGCATTCTTGG
TCCGATGGCTTTCCGTGACGGGGGATTTCAGTCTATTGGAGATGACCCCA
ACCGTTTTATCATCCAGGCCCGCGCCCATCACCTGTTCGCGCGGGCCGGC
AAGACGGTGCGTGTGACTGCGGATCTCGTAGTGTTGGATGACCAGCCCAT
CGGCCGTAAACGTGCTGTGCGGGCACTCGAGACCGACGACATTGTATTTG
CGGTAAGTGACCAAAATCTAAGAATtgaggaaagagagcgaaTAGCATCG
GTGAAAGTCCTTGAATAAGTTTTCAACTCTAATTCCTTGGAGCATTTCCA
TGTTTTGATGAGCCACATGGATATATTCATGGATATGACGCGATTATGTG
GCAATACTGATGATTTCGCTTCCATGTCGCGGACATGTTCCTTTCTACTC
TtgcttcccccttttctttcagtGCAGCCTTGATCCCTTCTTCAATTTCC
AGTCCCTTACTACGGGCAACAAGACCAGCAAGCATCGCAAGGATGGCACT
GACGTCGGGATTTCTTTCTCCCGGTCCAAAATCGCTCCCAACACGTGGAG
GCCTAAGTAAGTCAAATCTCCATCCATTCATTGCTTTTTCTCTGCCTTCC
TATAATGCTGACAGGGAGAAAGCGTTATTGTTTACCTTGATCGTTCCTCA
CTCCTCATCCGTCAAGTCTTTTTGTGTAGTGTGGAAACGCTTGCTTGTTT
CACGTCACGCTTTGCTCGATCGGCAAGCTGATTGTtctcccatcttcctt
tATTGCCCCGTAAGGATCACGTATGAGATCGTCGACGAAGGCGACACCCT
GGTGTGGACTCTCCCCAGCGACGGGACCAGGCTTCTCAAGAAGTATAAGA
TCACCATCATCATGCGAATTGGAAAGAACGTTCCTTCTGGCACCGTGATT
CCCCTGTACTTGAGCGTGCCCTTTGAatgggagcaggagctgggCGTGGT
GGTCAAGTAA
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Coding sequence (CDS) from alignment at KK037247.1:237490..238949+

>rna7964 ID=rna7964|Name=rna7964|organism=Nannochloropsis gaditana|type=CDS|length=3096bp|location=Sequence derived from alignment at KK037247.1:237490..238949+ (Nannochloropsis gaditana)
ATGCCGCTTTTTGTTTCCTCCCGCTACTTGCTGTCGATCGCAACCGCCGT
CCTCTGCTTGACATCCTCTTTCAGCCACGCGAAGATTGTAGTTGAAGATA
ATTTCATCGACGAGACTACACGCGAAGCTCTCCTTGCACAGCTTCCGTCT
GAGATGCATCGTTTCAAACACACGGTCGATGTACCAGGCAACGTGTACAA
GCGCTTGCTTTCCGTGTTGCATCCTGAAAACTCCGAAGTATTTCCTTCCC
AGCTCACTGCACCGGCCAAAGGACAGAAAGGTATGGTCGCCGCTCACAAA
GATACATTCGAGGACAGTTCTCTGGCAGACAGGCAGGTGGGCTTGGTGTA
CCTGGAAGGGGATGGCCGCATGCAATTGAAAAACGATGTGACCGGAGAGG
AAACGATTATCGACGTCAAGCCTGGCCGATTCCTGTCGTGGGATAACCGT
CATTATACTCACCAGCTTCTTGCGGGTAGCATGCCACGGCGCATTCTTGG
TCCGATGGCTTTCCGTGACGGGGGATTTCAGTCTATTGGAGATGACCCCA
ACCGTTTTATCATCCAGGCCCGCGCCCATCACCTGTTCGCGCGGGCCGGC
AAGACGGTGCGTGTGACTGCGGATCTCGTAGTGTTGGATGACCAGCCCAT
CGGCCGTAAACGTGCTGTGCGGGCACTCGAGACCGACGACATTGTATTTG
CGtGCAGCCTTGATCCCTTCTTCAATTTCCAGTCCCTTACTACGGGCAAC
AAGACCAGCAAGCATCGCAAGGATGGCACTGACGTCGGGATTTCTTTCTC
CCGGTCCAAAATCGCTCCCAACACGTGGAGGCCTAAGATCACGTATGAGA
TCGTCGACGAAGGCGACACCCTGGTGTGGACTCTCCCCAGCGACGGGACC
AGGCTTCTCAAGAAGTATAAGATCACCATCATCATGCGAATTGGAAAGAA
CGTTCCTTCTGGCACCGTGATTCCCCTGTACTTGAGCGTGCCCTTTGAat
gggagcaggagctgggCGTGGTGGTCAAGTAAATGCCGCTTTTTGTTTCC
TCCCGCTACTTGCTGTCGATCGCAACCGCCGTCCTCTGCTTGACATCCTC
TTTCAGCCACGCGAAGATTGTAGTTGAAGATAATTTCATCGACGAGACTA
CACGCGAAGCTCTCCTTGCACAGCTTCCGTCTGAGATGCATCGTTTCAAA
CACACGGTCGATGTACCAGGCAACGTGTACAAGCGCTTGCTTTCCGTGTT
GCATCCTGAAAACTCCGAAGTATTTCCTTCCCAGCTCACTGCACCGGCCA
AAGGACAGAAAGGTATGGTCGCCGCTCACAAAGATACATTCGAGGACAGT
TCTCTGGCAGACAGGCAGGTGGGCTTGGTGTACCTGGAAGGGGATGGCCG
CATGCAATTGAAAAACGATGTGACCGGAGAGGAAACGATTATCGACGTCA
AGCCTGGCCGATTCCTGTCGTGGGATAACCGTCATTATACTCACCAGCTT
CTTGCGGGTAGCATGCCACGGCGCATTCTTGGTCCGATGGCTTTCCGTGA
CGGGGGATTTCAGTCTATTGGAGATGACCCCAACCGTTTTATCATCCAGG
CCCGCGCCCATCACCTGTTCGCGCGGGCCGGCAAGACGGTGCGTGTGACT
GCGGATCTCGTAGTGTTGGATGACCAGCCCATCGGCCGTAAACGTGCTGT
GCGGGCACTCGAGACCGACGACATTGTATTTGCGtGCAGCCTTGATCCCT
TCTTCAATTTCCAGTCCCTTACTACGGGCAACAAGACCAGCAAGCATCGC
AAGGATGGCACTGACGTCGGGATTTCTTTCTCCCGGTCCAAAATCGCTCC
CAACACGTGGAGGCCTAAGATCACGTATGAGATCGTCGACGAAGGCGACA
CCCTGGTGTGGACTCTCCCCAGCGACGGGACCAGGCTTCTCAAGAAGTAT
AAGATCACCATCATCATGCGAATTGGAAAGAACGTTCCTTCTGGCACCGT
GATTCCCCTGTACTTGAGCGTGCCCTTTGAatgggagcaggagctgggCG
TGGTGGTCAAGTAAATGCCGCTTTTTGTTTCCTCCCGCTACTTGCTGTCG
ATCGCAACCGCCGTCCTCTGCTTGACATCCTCTTTCAGCCACGCGAAGAT
TGTAGTTGAAGATAATTTCATCGACGAGACTACACGCGAAGCTCTCCTTG
CACAGCTTCCGTCTGAGATGCATCGTTTCAAACACACGGTCGATGTACCA
GGCAACGTGTACAAGCGCTTGCTTTCCGTGTTGCATCCTGAAAACTCCGA
AGTATTTCCTTCCCAGCTCACTGCACCGGCCAAAGGACAGAAAGGTATGG
TCGCCGCTCACAAAGATACATTCGAGGACAGTTCTCTGGCAGACAGGCAG
GTGGGCTTGGTGTACCTGGAAGGGGATGGCCGCATGCAATTGAAAAACGA
TGTGACCGGAGAGGAAACGATTATCGACGTCAAGCCTGGCCGATTCCTGT
CGTGGGATAACCGTCATTATACTCACCAGCTTCTTGCGGGTAGCATGCCA
CGGCGCATTCTTGGTCCGATGGCTTTCCGTGACGGGGGATTTCAGTCTAT
TGGAGATGACCCCAACCGTTTTATCATCCAGGCCCGCGCCCATCACCTGT
TCGCGCGGGCCGGCAAGACGGTGCGTGTGACTGCGGATCTCGTAGTGTTG
GATGACCAGCCCATCGGCCGTAAACGTGCTGTGCGGGCACTCGAGACCGA
CGACATTGTATTTGCGtGCAGCCTTGATCCCTTCTTCAATTTCCAGTCCC
TTACTACGGGCAACAAGACCAGCAAGCATCGCAAGGATGGCACTGACGTC
GGGATTTCTTTCTCCCGGTCCAAAATCGCTCCCAACACGTGGAGGCCTAA
GATCACGTATGAGATCGTCGACGAAGGCGACACCCTGGTGTGGACTCTCC
CCAGCGACGGGACCAGGCTTCTCAAGAAGTATAAGATCACCATCATCATG
CGAATTGGAAAGAACGTTCCTTCTGGCACCGTGATTCCCCTGTACTTGAG
CGTGCCCTTTGAatgggagcaggagctgggCGTGGTGGTCAAGTAA
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Synonyms
Publications