EWM22739.1, cds7942 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585103332|gb|EWM22739.1| (hypothetical protein Naga_100209g9 [Nannochloropsis gaditana]) HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query: 1 MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK
Sbjct: 1 MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585103321|gb|EWM22729.1| (hypothetical protein Naga_100561g2 [Nannochloropsis gaditana] >gi|585103322|gb|EWM22730.1| hypothetical protein Naga_100561g2 [Nannochloropsis gaditana]) HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0 Identity = 328/344 (95.35%), Postives = 332/344 (96.51%), Query Frame = 0
Query: 1 MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSI-GDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
MPLFVSSRYLLSIATA LCLTSSFS AKIVVEDNFIDETTR+ALLAQLPSEMHRFKHTVD+PG VYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSI G D NRFIIQARAH LFARAGKTVRVTADLVVLDDQP GR+RAVRAL T DIVFACSLDPFFNFQSLT GNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGT+IPLYLSVP EWEQELGVVVK
Sbjct: 1 MPLFVSSRYLLSIATAALCLTSSFSFAKIVVEDNFIDETTRDALLAQLPSEMHRFKHTVDLPGKVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGGGDRNRFIIQARAHPLFARAGKTVRVTADLVVLDDQP-GRERAVRALPTADIVFACSLDPFFNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553178404|ref|XP_005852549.1| (hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526] >gi|422295984|gb|EKU23283.1| hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.1738 bits (178), Expect = 7.918e-12 Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 0
Query: 229 DDIVFACSLDPFFNFQSLTT------GNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
+D++ +C L Q T K K + G D +SF R K+ PNTWRPK+ Y V D L WTLP G K YKI +R+G+ V SGT +PL + V +W ++L V K
Sbjct: 59 EDVIVSCLLGGNATVQGHATRLLQGHSTKVLKRARLG-DEALSFQRGKLRPNTWRPKLRY--VKTNDELAWTLPVGGIVFGKTYKIKWRIRLGRGVASGTELPLTVRVA-DWMEDLVVTAK 175
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585101591|gb|EWM21377.1| (hypothetical protein Naga_100424g5 [Nannochloropsis gaditana]) HSP 1 Score: 70.0922 bits (170), Expect = 2.686e-11 Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
Query: 261 DVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
D +SF R + PNTW+PK+ Y D D L WTLP+ G L K YKI + +G V SGT +PL +SV EW ++L V VK
Sbjct: 41 DEALSFKRGVLKPNTWKPKLRYVKTD--DELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVA-EWMEDLVVSVK 120
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585111994|gb|EWM29458.1| (hypothetical protein Naga_100083g24 [Nannochloropsis gaditana]) HSP 1 Score: 69.3218 bits (168), Expect = 2.411e-10 Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 0
Query: 198 RAGKTVRVTADLVVLDDQPIGRKRAVRALE-TDDIVFACS-----LDPFFNFQSLTTGNKTS----KHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPF 332
+AG V +T + L+ R+R +R L D+I++ + + + + + L+ NKT K K G + RS+I PNTWRPK+ I G T ++P+ G L+ YKI RIGK PSG+VI Y+ +
Sbjct: 44 KAGGRVTLTTSFLFLET----RRRQLRELAFADEILYWATPNEADIPAYGDLEELSNKNKTKTSHPKSSKHGNSTDVRLVRSRIMPNTWRPKLRSNIT--GSTNFMSIPTTGLVALEDYKIINKFRIGKRYPSGSVITFYVYAEY 182
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553176372|ref|XP_005852373.1| (hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526] >gi|422296155|gb|EKU23454.1| hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 67.3958 bits (163), Expect = 2.765e-10 Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 0
Query: 229 DDIVFAC-------SLDPFFNFQSLTTGNKTS--KHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
+D+V +C +L N L G+ T K + G D +SF R K+ PNTWRPK+ Y + + L WTLP G K YKI + +G++V SGT +PL + V +W ++L V K
Sbjct: 2 EDVVVSCLLGGNTTTLHVQGNATRLLQGHSTKVLKRARLG-DEALSFKRGKLRPNTWRPKLRY--IKTNNELAWTLPVGGIVFGKTYKIKWRIHMGRSVASGTELPLTVRVA-DWMKDLVVTAK 121
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585103543|gb|EWM22885.1| (hypothetical protein Naga_100160g3 [Nannochloropsis gaditana]) HSP 1 Score: 69.3218 bits (168), Expect = 3.802e-10 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query: 233 FACSLDPFFNFQSLTTGNKTSKHR--KDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSV 330
+ +++P N SL+ N T+K++ K DV ++ +++I+PNTWRPK G + + LP DG L K+YKIT +RIGK +PSGT +P + V
Sbjct: 80 YGITVEPLVN--SLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFL-PLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGV 176
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553183816|ref|XP_005853972.1| (hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526] >gi|422295089|gb|EKU22388.1| hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 67.0106 bits (162), Expect = 9.548e-10 Identity = 35/103 (33.98%), Postives = 64/103 (62.14%), Query Frame = 0
Query: 230 DIVFACSLDPFFNFQSLTTGNKTSKHR--KDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSV 330
++++ +++P + L++ N T+K++ K DV ++ +++I+PNTWRPKI G + + +P +G L K+YK+T +RIGK +PSGT +P + V
Sbjct: 57 EVLYGITVEPLVS--PLSSKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKIFANGTGTGTSFL-PMPLNGLVLSKQYKVTSKIRIGKGIPSGTYVPFQIFV 156
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553184967|ref|XP_005854180.1| (hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526] >gi|553192556|ref|XP_005855596.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422293459|gb|EKU20759.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422294881|gb|EKU22181.1| hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 64.6994 bits (156), Expect = 3.317e-9 Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 0
Query: 251 KTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPF 332
K+SKH G + RS+I PNTWRPK+ I G T ++P+ G +LK YKI RIGK PSGTVI Y+ V +
Sbjct: 41 KSSKH---GNSTDVRLVRSRIIPNTWRPKLRSNI--TGSTNFMSVPTTGLVVLKDYKIINKFRIGKRYPSGTVISFYVFVDY 117
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585102369|gb|EWM21985.1| (hypothetical protein Naga_100745g2 [Nannochloropsis gaditana]) HSP 1 Score: 62.7734 bits (151), Expect = 1.816e-7 Identity = 40/94 (42.55%), Postives = 52/94 (55.32%), Query Frame = 0
Query: 243 FQSLTTGNKTSK---HRKDGTDVG---ISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSV 330
F SLT G + S + +G ++F RS + PNTWRPK Y IV G+ +VW LP DG L K YKI +R+ + V SGT +P L V
Sbjct: 236 FVSLTIGQEASASGFRNRTQKAIGARELTFKRSTLRPNTWRPKPRYSIV--GNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRV 327 The following BLAST results are available for this feature:
BLAST of EWM22739.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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