EWM22739.1, cds7942 (CDS) Nannochloropsis gaditana

Overview
NameEWM22739.1
Unique Namecds7942
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:237490..238191 +
Alignment locationKK037247.1:238412..238545 +
Alignment locationKK037247.1:238754..238949 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22739.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100209g9.4965.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:237490..238191 +
KK037247.1supercontigKK037247.1:238412..238545 +
KK037247.1supercontigKK037247.1:238754..238949 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585103332|gb|EWM22739.1| (hypothetical protein Naga_100209g9 [Nannochloropsis gaditana])

HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query:    1 MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
            MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK
Sbjct:    1 MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585103321|gb|EWM22729.1| (hypothetical protein Naga_100561g2 [Nannochloropsis gaditana] >gi|585103322|gb|EWM22730.1| hypothetical protein Naga_100561g2 [Nannochloropsis gaditana])

HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0
Identity = 328/344 (95.35%), Postives = 332/344 (96.51%), Query Frame = 0
Query:    1 MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSI-GDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
            MPLFVSSRYLLSIATA LCLTSSFS AKIVVEDNFIDETTR+ALLAQLPSEMHRFKHTVD+PG VYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSI G D NRFIIQARAH LFARAGKTVRVTADLVVLDDQP GR+RAVRAL T DIVFACSLDPFFNFQSLT GNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGT+IPLYLSVP EWEQELGVVVK
Sbjct:    1 MPLFVSSRYLLSIATAALCLTSSFSFAKIVVEDNFIDETTRDALLAQLPSEMHRFKHTVDLPGKVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGGGDRNRFIIQARAHPLFARAGKTVRVTADLVVLDDQP-GRERAVRALPTADIVFACSLDPFFNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553178404|ref|XP_005852549.1| (hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526] >gi|422295984|gb|EKU23283.1| hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 73.1738 bits (178), Expect = 7.918e-12
Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 0
Query:  229 DDIVFACSLDPFFNFQSLTT------GNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
            +D++ +C L      Q   T        K  K  + G D  +SF R K+ PNTWRPK+ Y  V   D L WTLP  G    K YKI   +R+G+ V SGT +PL + V  +W ++L V  K
Sbjct:   59 EDVIVSCLLGGNATVQGHATRLLQGHSTKVLKRARLG-DEALSFQRGKLRPNTWRPKLRY--VKTNDELAWTLPVGGIVFGKTYKIKWRIRLGRGVASGTELPLTVRVA-DWMEDLVVTAK 175          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585101591|gb|EWM21377.1| (hypothetical protein Naga_100424g5 [Nannochloropsis gaditana])

HSP 1 Score: 70.0922 bits (170), Expect = 2.686e-11
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
Query:  261 DVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
            D  +SF R  + PNTW+PK+ Y   D  D L WTLP+ G  L K YKI   + +G  V SGT +PL +SV  EW ++L V VK
Sbjct:   41 DEALSFKRGVLKPNTWKPKLRYVKTD--DELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVA-EWMEDLVVSVK 120          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585111994|gb|EWM29458.1| (hypothetical protein Naga_100083g24 [Nannochloropsis gaditana])

HSP 1 Score: 69.3218 bits (168), Expect = 2.411e-10
Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 0
Query:  198 RAGKTVRVTADLVVLDDQPIGRKRAVRALE-TDDIVFACS-----LDPFFNFQSLTTGNKTS----KHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPF 332
            +AG  V +T   + L+     R+R +R L   D+I++  +     +  + + + L+  NKT     K  K G    +   RS+I PNTWRPK+   I   G T   ++P+ G   L+ YKI    RIGK  PSG+VI  Y+   +
Sbjct:   44 KAGGRVTLTTSFLFLET----RRRQLRELAFADEILYWATPNEADIPAYGDLEELSNKNKTKTSHPKSSKHGNSTDVRLVRSRIMPNTWRPKLRSNIT--GSTNFMSIPTTGLVALEDYKIINKFRIGKRYPSGSVITFYVYAEY 182          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553176372|ref|XP_005852373.1| (hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526] >gi|422296155|gb|EKU23454.1| hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 67.3958 bits (163), Expect = 2.765e-10
Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 0
Query:  229 DDIVFAC-------SLDPFFNFQSLTTGNKTS--KHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
            +D+V +C       +L    N   L  G+ T   K  + G D  +SF R K+ PNTWRPK+ Y  +   + L WTLP  G    K YKI   + +G++V SGT +PL + V  +W ++L V  K
Sbjct:    2 EDVVVSCLLGGNTTTLHVQGNATRLLQGHSTKVLKRARLG-DEALSFKRGKLRPNTWRPKLRY--IKTNNELAWTLPVGGIVFGKTYKIKWRIHMGRSVASGTELPLTVRVA-DWMKDLVVTAK 121          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585103543|gb|EWM22885.1| (hypothetical protein Naga_100160g3 [Nannochloropsis gaditana])

HSP 1 Score: 69.3218 bits (168), Expect = 3.802e-10
Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:  233 FACSLDPFFNFQSLTTGNKTSKHR--KDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSV 330
            +  +++P  N  SL+  N T+K++  K   DV ++  +++I+PNTWRPK        G + +  LP DG  L K+YKIT  +RIGK +PSGT +P  + V
Sbjct:   80 YGITVEPLVN--SLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFL-PLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGV 176          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553183816|ref|XP_005853972.1| (hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526] >gi|422295089|gb|EKU22388.1| hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 67.0106 bits (162), Expect = 9.548e-10
Identity = 35/103 (33.98%), Postives = 64/103 (62.14%), Query Frame = 0
Query:  230 DIVFACSLDPFFNFQSLTTGNKTSKHR--KDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSV 330
            ++++  +++P  +   L++ N T+K++  K   DV ++  +++I+PNTWRPKI       G + +  +P +G  L K+YK+T  +RIGK +PSGT +P  + V
Sbjct:   57 EVLYGITVEPLVS--PLSSKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKIFANGTGTGTSFL-PMPLNGLVLSKQYKVTSKIRIGKGIPSGTYVPFQIFV 156          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|553184967|ref|XP_005854180.1| (hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526] >gi|553192556|ref|XP_005855596.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422293459|gb|EKU20759.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422294881|gb|EKU22181.1| hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 64.6994 bits (156), Expect = 3.317e-9
Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 0
Query:  251 KTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPF 332
            K+SKH   G    +   RS+I PNTWRPK+   I   G T   ++P+ G  +LK YKI    RIGK  PSGTVI  Y+ V +
Sbjct:   41 KSSKH---GNSTDVRLVRSRIIPNTWRPKLRSNI--TGSTNFMSVPTTGLVVLKDYKIINKFRIGKRYPSGTVISFYVFVDY 117          
BLAST of EWM22739.1 vs. NCBI_GenBank
Match: gi|585102369|gb|EWM21985.1| (hypothetical protein Naga_100745g2 [Nannochloropsis gaditana])

HSP 1 Score: 62.7734 bits (151), Expect = 1.816e-7
Identity = 40/94 (42.55%), Postives = 52/94 (55.32%), Query Frame = 0
Query:  243 FQSLTTGNKTSK---HRKDGTDVG---ISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSV 330
            F SLT G + S      +    +G   ++F RS + PNTWRPK  Y IV  G+ +VW LP DG  L K YKI   +R+ + V SGT +P  L V
Sbjct:  236 FVSLTIGQEASASGFRNRTQKAIGARELTFKRSTLRPNTWRPKPRYSIV--GNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRV 327          
The following BLAST results are available for this feature:
BLAST of EWM22739.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103332|gb|EWM22739.1|0.000e+0100.00hypothetical protein Naga_100209g9 [Nannochloropsi... [more]
gi|585103321|gb|EWM22729.1|0.000e+095.35hypothetical protein Naga_100561g2 [Nannochloropsi... [more]
gi|553178404|ref|XP_005852549.1|7.918e-1238.02hypothetical protein NGA_0710700, partial [Nannoch... [more]
gi|585101591|gb|EWM21377.1|2.686e-1146.99hypothetical protein Naga_100424g5 [Nannochloropsi... [more]
gi|585111994|gb|EWM29458.1|2.411e-1032.41hypothetical protein Naga_100083g24 [Nannochlorops... [more]
gi|553176372|ref|XP_005852373.1|2.765e-1036.29hypothetical protein NGA_0690000 [Nannochloropsis ... [more]
gi|585103543|gb|EWM22885.1|3.802e-1039.00hypothetical protein Naga_100160g3 [Nannochloropsi... [more]
gi|553183816|ref|XP_005853972.1|9.548e-1033.98hypothetical protein NGA_0434301 [Nannochloropsis ... [more]
gi|553184967|ref|XP_005854180.1|3.317e-945.12hypothetical protein NGA_0188501 [Nannochloropsis ... [more]
gi|585102369|gb|EWM21985.1|1.816e-742.55hypothetical protein Naga_100745g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7964rna7964Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications