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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100209g3.4962.mrna |
| Orig protein id | gnl|cribi|Naga_100209g3.4962 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:218497..220373 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7957 ID=rna7957|Name=rna7957|organism=Nannochloropsis gaditana|type=mRNA|length=1328bp
GCTTTGCGTTCACTTTAGCCTACTCATTCTCGATCTCGACCTCCTCCTCT
CACTTGTTTAGTACGTCAAGCAACGGGGGGCTGGTTTGCGGACTGGTCGC
CTCTACATTGATATCCGCCAGCAGGGAGGATCAGCGCATTACATGACTAT
GCCTTGGTTACCACGCGCGGCATCAGGCGCCTCTCTGCTTCGCTCCAACT
CCTCCTCTCGCACAGCATCCCTTTTCGCCTTGCTCGTCCTTGGCCCGCTT
GCGACGACCTTGTCGCATGCCTTTTTAATTTTCCACGCACGGCCAGGGCC
TTCCTCTATAGCACGCTTGCCTGCTTCCGCCCTTGGCCTTTCTACACCTT
TTTGTCTCCCTTCCTCCCTTCGGGCCGTGCCAGAGGGTCTCCTTAACGAT
GATGGAGAGCCCCAGTACGACGCTCCAGCCCGCGCCAAAATCGAAGAATT
GATAAAAAACAACAAAATCGTGCTTTTTATGAAAGGAACCCGATTGTTTC
CTTCGTGCGGATTCAGCAACACGGCCATCCGGATCTTGGATCAGTTGAAT
GTGGAGTACGAGACCGTCGACGTTTTGGCCGATGAACGCATTCGAGGGGA
GATCAAAAGGTACAGCGCGTGGCCTACCATCCCTCAGCTCTACTTACAAG
GAGACTTCATTGGCGGATCCGATATCATACTGGAAATGTATCAGACTGGG
GAGCTGCAAGAAATGATTGAGATCGCTGCTGCCTCGTAAAAGATATGTTC
GTGGCCAAGGACGGTGGAGATATCGGCCTCCGGAGTCTGAGCTCGTCTCG
GGGATAGCGACGCCTTCCATTGCATCGCTTGGCTCGTCATGATACACAAT
ACATCGGTTTTGAGTTTTTGTATCAGAACTGAATTAAAGAATCGACCTTT
GCATTTTCTACCATTTCTTTAGTAGCACTATACATTGATTAAAGCTCACG
GTGCGGTGAAAGAAGGTAGAACATGCAATTTATCAGTACTTTTCCCCCAT
TTTTATGCTTTTGGATTATATTTTTCGGTCAAGGAGAAGGTTGTTTGTTG
TGAGACCCATTTGATACAGGTCGGAGCAGACACAACCACTTCCACTACTA
TATAATGTCATAGCAAACTAGATGCTTGTCTGCGCTAGAGTGAAAGAGAA
ACATCAGATGGATAGTCTTTGCCTCACACTTGACGCGCTCTTACCGGTCA
CCAAATCCGCCACGGGAAGTCTTTCCGCGCTCATTACACAACAATTTTTT
ATTTTTCAAAGATCAAGCTGGCACGTGTCAAATACACACTTCTTGTATCG
TAGTTGAAGCGGGATGTACCACATGTTC back to topprotein sequence of rna7957 >rna7957-protein ID=rna7957-protein|Name=rna7957|organism=Nannochloropsis gaditana|type=polypeptide|length=265bp
MFLADPSTKMTVFRNDFPGYLGWPHFWDKAHKNKWEATTFKIIQHFLRGH
AEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLE
KHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTIS
CRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWL
SVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKD
FCSYILTDDEFVMPL back to topmRNA from alignment at KK037247.1:218497..220373+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7957 ID=rna7957|Name=rna7957|organism=Nannochloropsis gaditana|type=mRNA|length=1877bp|location=Sequence derived from alignment at KK037247.1:218497..220373+ (Nannochloropsis gaditana)
TTATCAGGGGCCTCCGAGAGCAGACATCCTTGTGCTCGGGcggcctttcc
ttctttccccttttttaATCAATAAAAACTTTTACATGGGGTCTCTGCGA
TTAAACCATATAAGTGGAATGCAATTACAAATCACGTTCTCCACTGCCGT
AATCATTATCGCGTCCCCACCCTATGGACCGATGACGTCTGCTGACGCCT
TGGACTCCCAGACGTCAGGTCGGGTGGCCCATATTGTCTAGGTGGCTAGG
TGGTATACATAATATatgcccttcctttcccttttttgccAACGGGAGCA
GATTTGCCCATAGATTATGTAGATGACGCGTGATATACATGGTAAAAGCA
GTAGCTGGTGAGTCGCATTTCGGTAAGTGCAAGCGCCATCACGACCGACT
AGAAGCGACGGGTTGAAAGCAAGCTGTAAGATCAATCGCTTACATCCTTT
ATTGAGACGCTGAAAGATGGTCATGGTCATTTCAACTCTGTTGAAATTAT
GTGTTTCGTAATCGTGTAGATGAATTGAATATATTATACACAAATACTTT
ATACACATTGATTCAGAATCACAGAAGAATGAAGACCAAGGGAATAGGGC
TTGATCATTTGCTTCCTTACAAGTGGCGGCGAGGAATTCATTATTCCTAT
GTGGCATGCGCCCTTCTTATCTCGATGTGGACTTTCAAATGATTATTGCC
AAGAGAGGGTGTCCACATTGATAGTTGGGAAAACGAACATATAAGGCACA
CGACATCCGATGAATGGAAAGGACGGAAGACTCAAGACGTGATGTTTTTG
GCCGATCCAAGCACTAAAATGACAGTATTTCGCAACGACTTTCCGGGCTA
TCTTGGGTGGCCTCATTTCTGGGACAAGGCGCACAAAAATAAATGGGAGG
CAACCACATTCAAAATAATACAGCATTTTCTGAGGGGCCACGCAGAGGCC
GCGTACATTGATTTCGGGGCGTGGGTGGGCCCAACAGCACTATTTGCTGC
TATCTTCTCCAATCATGTCTACGCGCTAGAACCTGACCACAACGCATTCT
CCGGGCTTGTGGCTAATGTAAACGCTAATTCTCATTTGGAAAAACATATC
GAGCTTTACAACGAATGCATCAATACAGAGACGGGGCCGATGACTTTCAG
GGGTATTGGTGACAGCACTAGTCGCTTTCGCGATGACCGCGGTGTCTCCA
CTTGGGGAAATAGGGAGACAAGACACGAATGGACTATCAGCTGCCGAACG
TTGCCAGAATTTATTCAGCAGGAGGGAATACGTCATCTGCGACTCATCAA
AATTGATACCGAAGGCGCAGAGCTTGTTCTACTCCCCTCATTAGTAAGCT
GGTTCCAGAGCTTACGGCATCCAAAGCCTGCTATATGGTTGTCGGTGCAT
CAGCCTTTTTATGATAAAGATGTTCCCACAAGCTCCAAGGAGGCTCTTTG
GACGGCGATAGGAGAATACAAATTCGTGTATTTAGAGGGCACAACTCTGG
TAGACATTCAGAAGAACAACTCGGATATGTTGTGCAAGGATTTTTGCTCC
TATATTCTGACAGATGACGAGTTTGTTATGCCGCTATAAGATTACCAGCA
CTTGGAGCTATGGCGAAGGAATAAAAATCCTATAAGAGTTTGAGAGCATT
TTGAGTACATCGAGAAAGAATTCTGTTCCTATTTTCGAACAGCTGCTAGG
ATTGTCATCCTGCCCAAAAGCTATAGCTTCATAGTAGTCCTTGTACTTTG
GGGGAATGAACGAAACGCATCTCGTCACTCATCAAAAAGTAATAAattgc
ttccttccttgaTTGAGAAAAACAAGCATGTACGGGTACTGTTGAGATTT
TTTGCTCATCATCGTAACACCAAGAGC back to topCoding sequence (CDS) from alignment at KK037247.1:218497..220373+ >rna7957 ID=rna7957|Name=rna7957|organism=Nannochloropsis gaditana|type=CDS|length=798bp|location=Sequence derived from alignment at KK037247.1:218497..220373+ (Nannochloropsis gaditana)
ATGTTTTTGGCCGATCCAAGCACTAAAATGACAGTATTTCGCAACGACTT
TCCGGGCTATCTTGGGTGGCCTCATTTCTGGGACAAGGCGCACAAAAATA
AATGGGAGGCAACCACATTCAAAATAATACAGCATTTTCTGAGGGGCCAC
GCAGAGGCCGCGTACATTGATTTCGGGGCGTGGGTGGGCCCAACAGCACT
ATTTGCTGCTATCTTCTCCAATCATGTCTACGCGCTAGAACCTGACCACA
ACGCATTCTCCGGGCTTGTGGCTAATGTAAACGCTAATTCTCATTTGGAA
AAACATATCGAGCTTTACAACGAATGCATCAATACAGAGACGGGGCCGAT
GACTTTCAGGGGTATTGGTGACAGCACTAGTCGCTTTCGCGATGACCGCG
GTGTCTCCACTTGGGGAAATAGGGAGACAAGACACGAATGGACTATCAGC
TGCCGAACGTTGCCAGAATTTATTCAGCAGGAGGGAATACGTCATCTGCG
ACTCATCAAAATTGATACCGAAGGCGCAGAGCTTGTTCTACTCCCCTCAT
TAGTAAGCTGGTTCCAGAGCTTACGGCATCCAAAGCCTGCTATATGGTTG
TCGGTGCATCAGCCTTTTTATGATAAAGATGTTCCCACAAGCTCCAAGGA
GGCTCTTTGGACGGCGATAGGAGAATACAAATTCGTGTATTTAGAGGGCA
CAACTCTGGTAGACATTCAGAAGAACAACTCGGATATGTTGTGCAAGGAT
TTTTGCTCCTATATTCTGACAGATGACGAGTTTGTTATGCCGCTATAA back to top
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