EWM22736.1, cds7935 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|585103329|gb|EWM22736.1| (hypothetical protein Naga_100209g3 [Nannochloropsis gaditana]) HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query: 1 MFLADPSTKMTVFRNDFPGYLGWPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFVMPL 265
MFLADPSTKMTVFRNDFPGYLGWPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFVMPL
Sbjct: 1 MFLADPSTKMTVFRNDFPGYLGWPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFVMPL 265
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|470509624|ref|XP_004351065.1| (methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440801646|gb|ELR22655.1| methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 134.806 bits (338), Expect = 9.105e-34 Identity = 86/252 (34.13%), Postives = 128/252 (50.79%), Query Frame = 0
Query: 12 VFRNDFPGYLGWPH-----FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTD 258
V++ + G + PH +WD WE TF + + FL +++IDFG+W+GPT L+ A + + YALEPD AF + AN+ N L+ H ++ +CI M GI D +++ G+ W + C TLP+FI + I +L LIK+D EGAE ++LPS W + KP +WLS+H+ + EA+ + YK V+ VDI NS LC DFC+ + TD
Sbjct: 117 VYKTTYEGSMANPHQPHIDWWDVIESRSWEIETFFVYKTFL--GPTSSFIDFGSWIGPTVLYGATLAKNGYALEPDPYAFDEVRANLALNPRLQDHTSIFWKCI------MDKPGIYPMGGGGGD--SMASVGSANHPKSWKVDCMTLPQFINEHQIENLHLIKMDPEGAEHIILPSFKPWLMQ-QKVKPTLWLSIHK----WNFAPGGAEAVVDVLRLYKRVFEGHQNQVDI---NSYTLC-DFCTILATD 349
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|470429397|ref|XP_004338197.1| (methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440795043|gb|ELR16184.1| methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 134.42 bits (337), Expect = 1.403e-33 Identity = 90/255 (35.29%), Postives = 135/255 (52.94%), Query Frame = 0
Query: 12 VFRNDFPGYLGWPH-----FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTL-VDIQKNNSDMLCKDFCSYILTDDE 260
V+ + G + P +WDK WE T+ I + F+ ++++IDFGAW+GPT L+ A + YALEPD AF L ANV N L+ ++Y CI M GI D ++T G W + C TLP+FI++ I +L LIK+DTEGAE ++LPS SW + KP +WLS+H+ + +EA+ + Y+ V LEG +L +D+ N+ +LC +FC+ + TD +
Sbjct: 122 VYATTYDGSMASPDQPTVDWWDKVDNRWWEMDTYFIYKTFI--GPQSSFIDFGAWIGPTVLYGATLAKAAYALEPDPYAFDELRANVALNPELQAKTKVYWRCI------MDKPGIYPMGGGGGD--SMATVGQGTHPKSWKVDCLTLPQFIEEHRIENLDLIKMDTEGAEHIILPSFKSWLLK-QTKKPTLWLSIHKWNFGP----GGEEAVLDVLRLYRRV-LEGDSLTLDL---NTYVLC-NFCTILATDSD 356
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1088846268|emb|SDW43423.1| (methyltransferase, FkbM family [Marininema mesophilum]) HSP 1 Score: 118.242 bits (295), Expect = 2.276e-28 Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 0
Query: 26 FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPM---TFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKE 217
W+ H+N WE TF I FL ++ Y+D GAW+GPT L+AA + HVYA+EPD AF L N + NS + I L N ++T+TG + GDS S + T ++ + C T+ + I++ I+ L +KID EG E +L+P L + ++ KP ++LS+H F +++ ++
Sbjct: 26 IWNDIHRNNWEEYTFDIFDRFLS--SDHTYLDIGAWIGPTVLYAAQIAKHVYAVEPDPVAFGELTTNFSLNSAISSRITLINSALSTKTGMTHLYSRHSFGDSVSSL-----IPTISDQSC----IVECITIADLIRKYSIKDLNFVKIDIEGGEYLLIPHLREFLET---EKPTLYLSLHPLFLKQNISRKCRD 206
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|488045539|ref|WP_002116936.1| (methyltransferase FkbM [Bacillus cereus] >gi|401146623|gb|EJQ54137.1| FkbM family methyltransferase [Bacillus cereus BAG6X1-2]) HSP 1 Score: 117.857 bits (294), Expect = 3.363e-28 Identity = 80/252 (31.75%), Postives = 118/252 (46.83%), Query Frame = 0
Query: 26 FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCR--TLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYD--------KDVPTS-----SKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFV 262
WD+ +N WE TFKI FL+ E +YID GAW+GPT L+ A + HVY +EPD AF +V NVN N + + N I ++G + RD G S T + R T+ + I + I ++ IKID EG E L+P L ++ L+ KP ++LS+H F + K V TS E L ++ YK+VY N+ +++ KD ++ EF+
Sbjct: 26 IWDRISQNDWEEETFKIFDRFLK--PENSYIDIGAWIGPTVLYGAHKAKHVYGVEPDPIAFKEIVTNVNLNPSIYSKVTCINAAITEKSGNINL--------YMRDQFGDSMSSLIPTTSDKYCQVRGITIHDLISENNIENVNFIKIDIEGGEYSLIPVL---YEFLKSQKPTLYLSIHPRFLNENLNLISTKGVNTSEHFKFQTEKLLDSLQFYKYVY----------DNSGNLVNKDTILRVMNTGEFI 254
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1079322493|ref|WP_070128333.1| (methyltransferase FkbM [Bacillus weihenstephanensis] >gi|1078705541|gb|OFD62138.1| hypothetical protein BWGOE4_23230 [Bacillus weihenstephanensis] >gi|1078710403|gb|OFD66940.1| hypothetical protein BWGOE7_22420 [Bacillus weihenstephanensis] >gi|1078747787|gb|OFD97104.1| hypothetical protein BWGOE12_22850 [Bacillus weihenstephanensis]) HSP 1 Score: 117.472 bits (293), Expect = 4.196e-28 Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 0
Query: 27 WDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTF---RGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVY 230
WD N WE +TF I+ FL H +Y+D GAWVGPT L+ A + HVYA+EPD AF L N+ N+ + + N ++ +TG GDST + T + + T+ C T+ E I + I+ L IKID EG+E L+PS+ + L K ++LS+H PF +++ +T E+K+ Y
Sbjct: 27 WDLIKNNSWEESTFNILDRFLNEHN--SYLDIGAWVGPTVLYGANLAKHVYAVEPDPVAFEELNENLTLNTQISSKVTPINAALSEKTGTANLYIRSAYGDSTPSL-----IPTISD----NSCTVDCTTVHELIHKHNIKDLNFIKIDVEGSEYSLIPSMKEF---LELEKTTLYLSLHPPFLRENLNRQ-----YTCENEFKYNY 214
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1079338107|ref|WP_070139243.1| (methyltransferase FkbM [Bacillus weihenstephanensis] >gi|1078684410|gb|OFD44976.1| hypothetical protein BWGOE2_22370 [Bacillus weihenstephanensis] >gi|1078687284|gb|OFD47813.1| hypothetical protein BWGOE1_22930 [Bacillus weihenstephanensis] >gi|1078689379|gb|OFD49875.1| hypothetical protein BWGOE3_22330 [Bacillus weihenstephanensis] >gi|1078704699|gb|OFD61307.1| hypothetical protein BWGOE6_23140 [Bacillus weihenstephanensis] >gi|1078745951|gb|OFD95282.1| hypothetical protein BWGOE11_23910 [Bacillus weihenstephanensis] >gi|1078752258|gb|OFE01516.1| hypothetical protein BWGOE13_23730 [Bacillus weihenstephanensis]) HSP 1 Score: 117.087 bits (292), Expect = 5.349e-28 Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 0
Query: 27 WDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTF---RGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVY 230
WD N WE +TF I+ FL H +Y+D GAWVGPT L+ A + HVYA+EPD AF L N+ N+ + + N ++ +TG GDST + T + + T+ C T+ E I + I+ L IKID EG+E L+PS+ + L K ++LS+H PF +++ +T E+K+ Y
Sbjct: 27 WDLIKNNSWEESTFNILDRFLNEHN--SYLDIGAWVGPTVLYGANLAKHVYAVEPDPVAFEELNENLTLNTQISSKVTPINAALSEKTGTANLYIRSAYGDSTPSL-----IPTISD----NSCTVDCTTVHELIHKHNIKDLNFIKIDVEGSEYSLIPSMKEF---LELEKTTLYLSLHPPFLRENLNRQ-----YTCENEFKYNY 214
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1094162750|ref|WP_071151238.1| (methyltransferase FkbM [Bacillus weihenstephanensis] >gi|1063142968|emb|SCM85646.1| FkbM family methyltransferase [Bacillus weihenstephanensis] >gi|1093414864|gb|OHX31688.1| hypothetical protein BWGOE5_22920 [Bacillus weihenstephanensis]) HSP 1 Score: 116.701 bits (291), Expect = 8.966e-28 Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = 0
Query: 27 WDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTF---RGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVY 230
WD N WE TF I+ FL H +Y+D GAWVGPT L+ A + HVYA+EPD AF L N+ N+ + + N ++ +TG GDST + T + + T+ C T+ E I + I+ L IKID EG+E L+PS+ + L K ++LS+H PF +++ +T E+K+ Y
Sbjct: 27 WDLIKNNSWEECTFNILDRFLNEHN--SYLDIGAWVGPTVLYGANLAKHVYAVEPDPVAFEELNENLTLNTQISSKVTPINAALSEKTGTANLYIRSAYGDSTPSL-----IPTISD----NSCTVDCTTVHELIHKHNIKDLNFIKIDVEGSEYSLIPSMKEF---LELEKTTLYLSLHPPFLRENLNRQ-----YTCENEFKYNY 214
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1026251031|gb|ANC76092.1| (hypothetical protein ABE65_004415 [Fictibacillus phosphorivorans]) HSP 1 Score: 116.701 bits (291), Expect = 1.070e-27 Identity = 62/184 (33.70%), Postives = 101/184 (54.89%), Query Frame = 0
Query: 23 WPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPF 206
+ +FW+ N WE TF+++ H+L H + Y+D G+WVGPT L+AA + H + +EPD A+ L N+ NS LE+ I + N+ ++ ++G M ++F D + TI+ TL E +++ I L LIK+D EG E +L+PS+ + L+ KP ++LS+H F
Sbjct: 19 FAYFWNTVFPNHWEDFTFQVLDHYL--HPDGNYLDIGSWVGPTLLYAANKAKHSFGVEPDSVAYEALKKNIKLNSELEEKITIINKALSYKSGTMNLY----KRTQFGDSSSSLVQSLSDEFQ--TIAVSTLKELVREYKITDLSLIKMDIEGGEYLLIPSMQKY---LKRYKPPLYLSLHPEF 191
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1177834753|ref|WP_082861287.1| (hypothetical protein [Fictibacillus phosphorivorans]) HSP 1 Score: 116.701 bits (291), Expect = 1.085e-27 Identity = 62/184 (33.70%), Postives = 101/184 (54.89%), Query Frame = 0
Query: 23 WPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPF 206
+ +FW+ N WE TF+++ H+L H + Y+D G+WVGPT L+AA + H + +EPD A+ L N+ NS LE+ I + N+ ++ ++G M ++F D + TI+ TL E +++ I L LIK+D EG E +L+PS+ + L+ KP ++LS+H F
Sbjct: 23 FAYFWNTVFPNHWEDFTFQVLDHYL--HPDGNYLDIGSWVGPTLLYAANKAKHSFGVEPDSVAYEALKKNIKLNSELEEKITIINKALSYKSGTMNLY----KRTQFGDSSSSLVQSLSDEFQ--TIAVSTLKELVREYKITDLSLIKMDIEGGEYLLIPSMQKY---LKRYKPPLYLSLHPEF 195 The following BLAST results are available for this feature:
BLAST of EWM22736.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|