EWM22736.1, cds7935 (CDS) Nannochloropsis gaditana

Overview
NameEWM22736.1
Unique Namecds7935
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:219288..220085 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22736.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100209g3.4962.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:219288..220085 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR006342FkbM_mtfrase
Homology
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|585103329|gb|EWM22736.1| (hypothetical protein Naga_100209g3 [Nannochloropsis gaditana])

HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query:    1 MFLADPSTKMTVFRNDFPGYLGWPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFVMPL 265
            MFLADPSTKMTVFRNDFPGYLGWPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFVMPL
Sbjct:    1 MFLADPSTKMTVFRNDFPGYLGWPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFVMPL 265          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|470509624|ref|XP_004351065.1| (methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440801646|gb|ELR22655.1| methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 134.806 bits (338), Expect = 9.105e-34
Identity = 86/252 (34.13%), Postives = 128/252 (50.79%), Query Frame = 0
Query:   12 VFRNDFPGYLGWPH-----FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTD 258
            V++  + G +  PH     +WD      WE  TF + + FL     +++IDFG+W+GPT L+ A  + + YALEPD  AF  + AN+  N  L+ H  ++ +CI      M   GI        D   +++ G+      W + C TLP+FI +  I +L LIK+D EGAE ++LPS   W    +  KP +WLS+H+     +      EA+   +  YK V+      VDI   NS  LC DFC+ + TD
Sbjct:  117 VYKTTYEGSMANPHQPHIDWWDVIESRSWEIETFFVYKTFL--GPTSSFIDFGSWIGPTVLYGATLAKNGYALEPDPYAFDEVRANLALNPRLQDHTSIFWKCI------MDKPGIYPMGGGGGD--SMASVGSANHPKSWKVDCMTLPQFINEHQIENLHLIKMDPEGAEHIILPSFKPWLMQ-QKVKPTLWLSIHK----WNFAPGGAEAVVDVLRLYKRVFEGHQNQVDI---NSYTLC-DFCTILATD 349          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|470429397|ref|XP_004338197.1| (methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440795043|gb|ELR16184.1| methyltransferase, FkbM subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 134.42 bits (337), Expect = 1.403e-33
Identity = 90/255 (35.29%), Postives = 135/255 (52.94%), Query Frame = 0
Query:   12 VFRNDFPGYLGWPH-----FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVYLEGTTL-VDIQKNNSDMLCKDFCSYILTDDE 260
            V+   + G +  P      +WDK     WE  T+ I + F+    ++++IDFGAW+GPT L+ A  +   YALEPD  AF  L ANV  N  L+   ++Y  CI      M   GI        D   ++T G       W + C TLP+FI++  I +L LIK+DTEGAE ++LPS  SW    +  KP +WLS+H+  +        +EA+   +  Y+ V LEG +L +D+   N+ +LC +FC+ + TD +
Sbjct:  122 VYATTYDGSMASPDQPTVDWWDKVDNRWWEMDTYFIYKTFI--GPQSSFIDFGAWIGPTVLYGATLAKAAYALEPDPYAFDELRANVALNPELQAKTKVYWRCI------MDKPGIYPMGGGGGD--SMATVGQGTHPKSWKVDCLTLPQFIEEHRIENLDLIKMDTEGAEHIILPSFKSWLLK-QTKKPTLWLSIHKWNFGP----GGEEAVLDVLRLYRRV-LEGDSLTLDL---NTYVLC-NFCTILATDSD 356          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1088846268|emb|SDW43423.1| (methyltransferase, FkbM family [Marininema mesophilum])

HSP 1 Score: 118.242 bits (295), Expect = 2.276e-28
Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 0
Query:   26 FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPM---TFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKE 217
             W+  H+N WE  TF I   FL   ++  Y+D GAW+GPT L+AA  + HVYA+EPD  AF  L  N + NS +   I L N  ++T+TG     +    GDS S       + T  ++       + C T+ + I++  I+ L  +KID EG E +L+P L  + ++    KP ++LS+H  F  +++    ++
Sbjct:   26 IWNDIHRNNWEEYTFDIFDRFLS--SDHTYLDIGAWIGPTVLYAAQIAKHVYAVEPDPVAFGELTTNFSLNSAISSRITLINSALSTKTGMTHLYSRHSFGDSVSSL-----IPTISDQSC----IVECITIADLIRKYSIKDLNFVKIDIEGGEYLLIPHLREFLET---EKPTLYLSLHPLFLKQNISRKCRD 206          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|488045539|ref|WP_002116936.1| (methyltransferase FkbM [Bacillus cereus] >gi|401146623|gb|EJQ54137.1| FkbM family methyltransferase [Bacillus cereus BAG6X1-2])

HSP 1 Score: 117.857 bits (294), Expect = 3.363e-28
Identity = 80/252 (31.75%), Postives = 118/252 (46.83%), Query Frame = 0
Query:   26 FWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCR--TLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYD--------KDVPTS-----SKEALWTAIGEYKFVYLEGTTLVDIQKNNSDMLCKDFCSYILTDDEFV 262
             WD+  +N WE  TFKI   FL+   E +YID GAW+GPT L+ A  + HVY +EPD  AF  +V NVN N  +   +   N  I  ++G +            RD  G S      T  +     R  T+ + I +  I ++  IKID EG E  L+P L   ++ L+  KP ++LS+H  F +        K V TS       E L  ++  YK+VY           N+ +++ KD    ++   EF+
Sbjct:   26 IWDRISQNDWEEETFKIFDRFLK--PENSYIDIGAWIGPTVLYGAHKAKHVYGVEPDPIAFKEIVTNVNLNPSIYSKVTCINAAITEKSGNINL--------YMRDQFGDSMSSLIPTTSDKYCQVRGITIHDLISENNIENVNFIKIDIEGGEYSLIPVL---YEFLKSQKPTLYLSIHPRFLNENLNLISTKGVNTSEHFKFQTEKLLDSLQFYKYVY----------DNSGNLVNKDTILRVMNTGEFI 254          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1079322493|ref|WP_070128333.1| (methyltransferase FkbM [Bacillus weihenstephanensis] >gi|1078705541|gb|OFD62138.1| hypothetical protein BWGOE4_23230 [Bacillus weihenstephanensis] >gi|1078710403|gb|OFD66940.1| hypothetical protein BWGOE7_22420 [Bacillus weihenstephanensis] >gi|1078747787|gb|OFD97104.1| hypothetical protein BWGOE12_22850 [Bacillus weihenstephanensis])

HSP 1 Score: 117.472 bits (293), Expect = 4.196e-28
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 0
Query:   27 WDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTF---RGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVY 230
            WD    N WE +TF I+  FL  H   +Y+D GAWVGPT L+ A  + HVYA+EPD  AF  L  N+  N+ +   +   N  ++ +TG          GDST        + T  +    +  T+ C T+ E I +  I+ L  IKID EG+E  L+PS+  +   L   K  ++LS+H PF  +++        +T   E+K+ Y
Sbjct:   27 WDLIKNNSWEESTFNILDRFLNEHN--SYLDIGAWVGPTVLYGANLAKHVYAVEPDPVAFEELNENLTLNTQISSKVTPINAALSEKTGTANLYIRSAYGDSTPSL-----IPTISD----NSCTVDCTTVHELIHKHNIKDLNFIKIDVEGSEYSLIPSMKEF---LELEKTTLYLSLHPPFLRENLNRQ-----YTCENEFKYNY 214          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1079338107|ref|WP_070139243.1| (methyltransferase FkbM [Bacillus weihenstephanensis] >gi|1078684410|gb|OFD44976.1| hypothetical protein BWGOE2_22370 [Bacillus weihenstephanensis] >gi|1078687284|gb|OFD47813.1| hypothetical protein BWGOE1_22930 [Bacillus weihenstephanensis] >gi|1078689379|gb|OFD49875.1| hypothetical protein BWGOE3_22330 [Bacillus weihenstephanensis] >gi|1078704699|gb|OFD61307.1| hypothetical protein BWGOE6_23140 [Bacillus weihenstephanensis] >gi|1078745951|gb|OFD95282.1| hypothetical protein BWGOE11_23910 [Bacillus weihenstephanensis] >gi|1078752258|gb|OFE01516.1| hypothetical protein BWGOE13_23730 [Bacillus weihenstephanensis])

HSP 1 Score: 117.087 bits (292), Expect = 5.349e-28
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 0
Query:   27 WDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTF---RGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVY 230
            WD    N WE +TF I+  FL  H   +Y+D GAWVGPT L+ A  + HVYA+EPD  AF  L  N+  N+ +   +   N  ++ +TG          GDST        + T  +    +  T+ C T+ E I +  I+ L  IKID EG+E  L+PS+  +   L   K  ++LS+H PF  +++        +T   E+K+ Y
Sbjct:   27 WDLIKNNSWEESTFNILDRFLNEHN--SYLDIGAWVGPTVLYGANLAKHVYAVEPDPVAFEELNENLTLNTQISSKVTPINAALSEKTGTANLYIRSAYGDSTPSL-----IPTISD----NSCTVDCTTVHELIHKHNIKDLNFIKIDVEGSEYSLIPSMKEF---LELEKTTLYLSLHPPFLRENLNRQ-----YTCENEFKYNY 214          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1094162750|ref|WP_071151238.1| (methyltransferase FkbM [Bacillus weihenstephanensis] >gi|1063142968|emb|SCM85646.1| FkbM family methyltransferase [Bacillus weihenstephanensis] >gi|1093414864|gb|OHX31688.1| hypothetical protein BWGOE5_22920 [Bacillus weihenstephanensis])

HSP 1 Score: 116.701 bits (291), Expect = 8.966e-28
Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = 0
Query:   27 WDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTF---RGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPFYDKDVPTSSKEALWTAIGEYKFVY 230
            WD    N WE  TF I+  FL  H   +Y+D GAWVGPT L+ A  + HVYA+EPD  AF  L  N+  N+ +   +   N  ++ +TG          GDST        + T  +    +  T+ C T+ E I +  I+ L  IKID EG+E  L+PS+  +   L   K  ++LS+H PF  +++        +T   E+K+ Y
Sbjct:   27 WDLIKNNSWEECTFNILDRFLNEHN--SYLDIGAWVGPTVLYGANLAKHVYAVEPDPVAFEELNENLTLNTQISSKVTPINAALSEKTGTANLYIRSAYGDSTPSL-----IPTISD----NSCTVDCTTVHELIHKHNIKDLNFIKIDVEGSEYSLIPSMKEF---LELEKTTLYLSLHPPFLRENLNRQ-----YTCENEFKYNY 214          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1026251031|gb|ANC76092.1| (hypothetical protein ABE65_004415 [Fictibacillus phosphorivorans])

HSP 1 Score: 116.701 bits (291), Expect = 1.070e-27
Identity = 62/184 (33.70%), Postives = 101/184 (54.89%), Query Frame = 0
Query:   23 WPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPF 206
            + +FW+    N WE  TF+++ H+L  H +  Y+D G+WVGPT L+AA  + H + +EPD  A+  L  N+  NS LE+ I + N+ ++ ++G M         ++F D          +     TI+  TL E +++  I  L LIK+D EG E +L+PS+  +   L+  KP ++LS+H  F
Sbjct:   19 FAYFWNTVFPNHWEDFTFQVLDHYL--HPDGNYLDIGSWVGPTLLYAANKAKHSFGVEPDSVAYEALKKNIKLNSELEEKITIINKALSYKSGTMNLY----KRTQFGDSSSSLVQSLSDEFQ--TIAVSTLKELVREYKITDLSLIKMDIEGGEYLLIPSMQKY---LKRYKPPLYLSLHPEF 191          
BLAST of EWM22736.1 vs. NCBI_GenBank
Match: gi|1177834753|ref|WP_082861287.1| (hypothetical protein [Fictibacillus phosphorivorans])

HSP 1 Score: 116.701 bits (291), Expect = 1.085e-27
Identity = 62/184 (33.70%), Postives = 101/184 (54.89%), Query Frame = 0
Query:   23 WPHFWDKAHKNKWEATTFKIIQHFLRGHAEAAYIDFGAWVGPTALFAAIFSNHVYALEPDHNAFSGLVANVNANSHLEKHIELYNECINTETGPMTFRGIGDSTSRFRDDRGVSTWGNRETRHEWTISCRTLPEFIQQEGIRHLRLIKIDTEGAELVLLPSLVSWFQSLRHPKPAIWLSVHQPF 206
            + +FW+    N WE  TF+++ H+L  H +  Y+D G+WVGPT L+AA  + H + +EPD  A+  L  N+  NS LE+ I + N+ ++ ++G M         ++F D          +     TI+  TL E +++  I  L LIK+D EG E +L+PS+  +   L+  KP ++LS+H  F
Sbjct:   23 FAYFWNTVFPNHWEDFTFQVLDHYL--HPDGNYLDIGSWVGPTLLYAANKAKHSFGVEPDSVAYEALKKNIKLNSELEEKITIINKALSYKSGTMNLY----KRTQFGDSSSSLVQSLSDEFQ--TIAVSTLKELVREYKITDLSLIKMDIEGGEYLLIPSMQKY---LKRYKPPLYLSLHPEF 195          
The following BLAST results are available for this feature:
BLAST of EWM22736.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103329|gb|EWM22736.1|0.000e+0100.00hypothetical protein Naga_100209g3 [Nannochloropsi... [more]
gi|470509624|ref|XP_004351065.1|9.105e-3434.13methyltransferase, FkbM subfamily protein [Acantha... [more]
gi|470429397|ref|XP_004338197.1|1.403e-3335.29methyltransferase, FkbM subfamily protein [Acantha... [more]
gi|1088846268|emb|SDW43423.1|2.276e-2833.33methyltransferase, FkbM family [Marininema mesophi... [more]
gi|488045539|ref|WP_002116936.1|3.363e-2831.75methyltransferase FkbM [Bacillus cereus] >gi|40114... [more]
gi|1079322493|ref|WP_070128333.1|4.196e-2833.82methyltransferase FkbM [Bacillus weihenstephanensi... [more]
gi|1079338107|ref|WP_070139243.1|5.349e-2833.82methyltransferase FkbM [Bacillus weihenstephanensi... [more]
gi|1094162750|ref|WP_071151238.1|8.966e-2833.82methyltransferase FkbM [Bacillus weihenstephanensi... [more]
gi|1026251031|gb|ANC76092.1|1.070e-2733.70hypothetical protein ABE65_004415 [Fictibacillus p... [more]
gi|1177834753|ref|WP_082861287.1|1.085e-2733.70hypothetical protein [Fictibacillus phosphorivoran... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7957rna7957Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications