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Properties
| Property Name | Value |
|---|
| Product | WD40-repeat-containing domain protein |
| Orig transcript id | gnl|cribi|Naga_100106g8.1452.mrna |
| Orig protein id | gnl|cribi|Naga_100106g8.1452 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:436926..439066 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna795 ID=rna795|Name=rna795|organism=Nannochloropsis gaditana|type=mRNA|length=3389bp
GGCGCCCAAAAGAGCAAGTAGTGCCACCACCAAGCCTAGGAGCTCGGAAG
GCTCCATGGCTGGTGATGGGTAGCAGCAAACCTCTGTTTTGCGAAAAATT
ATATGCTGTGAGTCGTCCCTCGTCCATTGTTTGGCCTCGACAAGACGCTC
GATCCACGCACCCACCTCTTGCCCTTGACCACGTTGTCATGATAAATGGA
AGGAAAGGGGCAATGGCGGCTGCCTTTCTTTTCCTGCTCAGTTTGATTGC
AGGAAAGGCATGGGTGCTCCACCCTTCGACATCATCATCCTGCGCTGGAC
AATCATTCCCGTCACTCGTGGGATGCGTTGCAGCCGCGACTTTTCACAGC
CCTGTCAAGAGCGGAAAAGCTGCGGGGGAGGAGGCAGTAGGAGGTTCTGA
GAGCGAGCGAAGGGAGCTTGTGCTAGCCAACAAACCACCGGACGCGGTGC
AAAGGGCGGCAAGAACACGACCGTCGCACAAAGCGAAGTTACCACAAGAC
CGACAAAGGCACACGGCAAATGGCGGGTGGTCAGAAGGCGATGTTCGAGC
AGCGCACCACCATTATCAGGATCCACTGCATTCAGAGGCAACCTCGGCGC
ACGCCCCGTCATATACACGCCACCCCTTTTCTACACTTGCACGCACGAGA
CTACGCGGCAGTGATTGCAATACCCTGTTGAACAGCATAGAGACGTACGC
GGAGGGTGCCTCCGTTGACGAGCTGAGCGACGCGCTCTCCCGACTGGGGC
GTCTTGCCACCTCCAAGGAGGCCCTTGGCCGAATCTGCCACGATGCGCGC
TTCCACCTTCTCCTCCAGCGTCTCGTCGAGAGCAGCCCCTTGATGCCCCC
CAAGCGGGCTCCTTTCCTCCTCAGCAGCCTCGCGAAGTTTAGCACGGCGC
CCGGCCCCACTGTGACGGCTTTCATCTCCACCCCCAGCGTGCAGGCCTTA
CTCCCAGCCCTGCAAAAGCGGGTGGACGCCGGACTCGACCAATACTCGCC
CATCGCTTTCTGCACTGTTGCCTTTGCCTTCTCTCGGCTTCGGTACGCTC
CGCACCTGGAGGTGGAGGACTGCGAGATCGAGGATACCAAAGGGCCTGAC
AAAGCCTCCCACACCCCTCCCTCGCCTTCTGACCCCCCTGACCGGAGCGT
CCTTGCCTGGTGGTCCCGCTTCATCGAAGCCTCGCAAAATCGACTCATCG
AATTCAGCCCCTGGGAGCTCTCTCAACTCGTCCGCTCCCTCATGGCGCAG
ACCGGCGCCCCCAAAGAGGCCCTCCTCTCCCCCCCCTTCCTCACCTTGAC
CCTCCGATGCGCCGAGCGCCAACTCTTCACCGCCTTTACCGTCCGGGACC
TGGAGGGACTGGCCACCTCGCTCTCCAAAATCCCCCCGCACTTGTTCAAG
CCTCCGCAATCCTTCTTGGAGACGGTGGTCCGAGCGGCCGATGCCCAGCT
CCCTCGAGGCTTCCGGCCCCCGAGCCTGGCCCGTTTTCTCCACGCCCTCT
CCCGCCTGGAGGGTTTCTCCCCCGACCCGCACTTCCTCCGCCGGGCGGAG
CAGGCGTGTGCGGGCTGGACAGGCACGTGGGAGCAGGGCCCCATCGCCCT
GATCGTGCAAGCCTGGAGCTGGTTGAAGTACCACCCCAGCGAAGCCACCT
TGGCGACTTTGCTCGGCCAAGCCCGGGGCATGCTCGAAGACGGAGTCTTC
ACGCCGTTGAACGCGGGCACGCTCATCCAGTCCTTGGGCGAGCTGCGTCG
GTCCCCGGGAGACGCCTGGTTGTCCACCTTTTGCGAGGCGGCGGCCCTGA
AATTCCCGGACATGCACGGGAAAGACTTGAATTTCATTCTCAAGGGTCTG
GCCAAGTTGAATTGGTATCCAGGCGACGCCTTCATGGTAGGCCTGCTCGG
GCACATGCGTCCCTACCTGGAGGGATTCAACGGCGCGGACCTCCAGTTCA
CCATGTCATCGATCGTGGGACTGCACTACCTGCCCCACCGCGCCTTCCTG
GACGCTTTCCAAGCTCGTTTCTCACGCTTGCTCCAGGACAGGCAGGTCTC
TTCCCGCAATTTGTGCATCGTCCTTTGGGCTTTCGCCGCCTTGGAAGTCC
CGAATGCGCGGCCCTTCGTCGTCGAATGCATGCGGGCGGCTATTGCCCAG
CTCGAGGCGGAGAGGCCTCGGTGGGGGCAGTGGGAGGCAGACGCGCCAGA
GACATGGTCCTTGACGGCGCGCATCCGACAGCTGCGCCAGGTATATCTAT
ACGCCTTACGTCTAGAGGGTGCGGGGTCACAAAGCGACAGGAACGAAAGC
AGTCTGGCCGAAGAGTTTCGGGGCATGGGCCTGGTGGAGCTTCTGGAGAC
AGGACTGCGGTATTCGAAGGAGGAGCTGGTGTTGGCCAAGTCGCAGGAGT
CCGGCTTCCACCGGGAGGTGGCGGAGATCCTCCAGTCCCTGGGAGTACGG
GCCCGACGAAGCGTGGACTGCTTCGTGCTGGACCTGATGCTGGAATCGCC
CCAGGCGGCAGAGGCATCGGGACAGGGAGGGGACAAGGGAGAGGGCTTGG
GGGCGGGTACGCTGGACAGCACGGGAAAGGAAAGGCAAGACTGGAGTGGG
AGAGGTATGTCGACGGGTCAAAGGCAATCGTCAGAGGGTGATGCCGTCAG
AGACGCGGAAGATCCCCGGACTGAAGGGCCTCCAGCGGGCGGGAAGGAGC
AGGAGATTAAGGGCGCGAAAGATGCCACGAAGCCCCTGGTGCTCCTCTTG
CATGGGCCCAGCCGTTTCCTCCGCGGCCTCACAGGGACGGCATCGCCCAA
GATGGAGGCTGGCACGGCATTCAAGGTCAAGATCCTCCAGACAAAGAGCC
TGCATCGCTTCGCGGACGTCGTCTCACTTGACGTGTGGGAGTGGGCTCGG
CAAAGAACTCGGGAAGAGAAAGTAGAATTCCTGCGCCAAAAAATTGGACC
GACACTCTTGGAAACATACATGGCACCTTCTATGACATTGGCGTCGGCCG
ATGGAGGAGGTCGATCGGAAAAACAGGAAAAGAAGGAGAAAGGCAAGGGT
GAGGGAAAGGTGATGGAAGGGATGCGACAGGTGATGGCGTGACATTGGTG
TAGGGATTGTAGTTGAGTATTTCTTGATTTATACAAATGCTTTCACGTGT
ACTATAGAAGGTGCATCTGACCTGGGTGGGAAGTTCTGCGAATATGACTA
TGGTAAGAGATGATTCATGAAAAAATCCTCTGCGCCATCCCTCGCATCGT
CATCTCGCCCTGAACAGAGGAGAAGAAGGACTAATTAATTATGTTGATGA
TAGCAAAACGCATATTTATACGCTGCAGCATCTTTTCAAACTCAGAAAAG
AATGCAGACTTACAGAATGAAAGCCAATGATCGTCGTCG back to topprotein sequence of rna795 >rna795-protein ID=rna795-protein|Name=rna795|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MRFRVCTADACHRSVHGGNTSSCDDLDTSDMSSDSRFSKLPKKKRLLIQI
KYTGTRMPDDSHFFDDAAYISHIRDEAATKEATIFHTAHCPQNRYLLASS
NKGRIAIWDLSFYLFPAASASLLTTCPSLSFASRASPLLTRGFSRHLRQY
ECRMFPAALRRKGFPCLSIQVSERAINHVMFLGEGSTSPLLVLAGDDGIY
VWPWAHILKLLSQAIGEDGGMDQDCTQGIPGNSCITQDLGAPSALLKALP
SQEAWPFLTESNQVAPSFHSSSSTSPSVCFSACGDALVRQWDLETQKCAS
VLIGHTGFSMVSAARTDCAIQGVAFEEEKIISVGNERQALHWARPGLGKA
ARVTTDIPSVFSVNVRRSPPNGDGVTVYAGRADHVSVFVHPEHSAFNLKF
R back to topmRNA from alignment at CM002456.1:436926..439066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna795 ID=rna795|Name=rna795|organism=Nannochloropsis gaditana|type=mRNA|length=2141bp|location=Sequence derived from alignment at CM002456.1:436926..439066- (Nannochloropsis gaditana)
ATGCGATTTCGAGTTTGCACAGCGGATGCATGCCATCGTAGCGTCCATGG
TGGTAATACTTCTTCTTGCGATGACTTAGACACATCTGATATGAGCAGCG
ATTCACGATTCAGCAAGCTTCCCAAAAAAAAGTAAGCTTTATATAGAATA
TGTCGTGTTAACACACCTGGGGCCTTAAATATCGACAAGTTTGATAGTTC
CAAGAGATGCGAGATACGCGTGTGCTTCTTTCTCTTGTATCGAGTTACCT
TCCCACGTTGTTCCTTACCGGCGCGGACCACGAAAAGCGCGGATGAAGTA
AAAACTCTTCATCAGCGGGAGGCTTTTGTATGTTTGTGGTGCATCCCTCA
AAAATTGTCCACCATCTGAGTTAGGGCCGGCCCATACGGCGGTCGGCGGG
AGGTTCCCTTCAAAGTTTGCTCGAAAAGAAAGCACTGTAGCCTCGAAAGG
ATGACTTTTCCCAGACTTGTGTGCAAAGTTGATAAAAAAAGATCGAGTGT
GATAACAGTCCGCTTCAAGCGATCGAGGTTACTCGTTCAGCGGAGGGTTA
TTCAATCACTCGACGCACAATGTTTCCGGCCCTGACACTGGTTACTAACC
AGTAGCAGCGAGGCGACTAGTTGACCATGCCCTGTCCGTTGTTCGAAGCC
TCCAGGCCCTTAAATCACTTCTCCGAAAACTTCATGCACAATTCCAGGCG
ACTGCTTATTCAAATCAAGTATACAGGTACAAGAATGCCGGATGATAGCC
ATTTCTTCGATGACGCCGCTTACATTTCCCACATCCGAGACGAAGCGGCG
ACCAAGGAGGCCACCATATTCCATACTGCACACTGCCCACAAAATCGTTA
CCTCCTGGCCTCGTCAAATAAAGGGAGAATCGCTATATGGGACTTGTCTT
TTTACCTTTTCCCAGCGGCATCCGCGTCTCTACTCACCACATGTCCTTCG
CTATCGTTCGCCTCAAGAGCCTCCCCTCTGCTCACACGTGGATTTTCACG
CCACCTCCGTCAGTATGAATGTCGGATGTTCCCCGCTGCATTACGACGAA
AAGGTTTTCCATGCTTGAGCATACAAGTCTCTGAGCGGGCCATAAACCAC
GTAATGTTCCTGGGTGAAGGCTCCACGAGTCCCTTACTGGTCTTGGCGGG
CGACGACGGCATCTACGTATGGCCTTGGGCGCACATTTTGAAGCTCTTGA
GTCAGGCCATTGGGGAAGATGGGGGAATGGACCAGGATTGCACGCAGGGT
ATACCGGGAAACTCGTGTATAACGCAGGATCTTGGAGCTCCATCTGCCCT
TCTCAAGGCTCTCCCCTCCCAGGAGGCGTGGCCTTTCCTCACAGAGAGCA
ACCAAGTCGCGCCCTCCTTTCATTCGTCTTCGTCCACCTCCCCCTCTGTC
TGCTTTAGCGCCTGTGGAGATGCGTTGGTTCGTCAATGGGACCTGGAGAC
ACAGAAGTGCGCGTCAGTCCTGATCGGGCACACCGGGTACGTCCACGCGA
TCCAGAGTCTGGGCCCCGGGACTGCTGCGCCCGGCCTAGTCCTGTCGGGG
GGAGAGGATGGGAAGATCGGTGTGTGGGATGTGCGAGCCTGCGATGGCAG
GGGGGGAGGCGTGGCGTCGCTGGTCAGAATGATGGAGGGATGGGAGAGGG
GTGAAGTTCTGGGGGAAAAGAACAGGACAAGCGGCGGCGGGATTGGCAGC
AACAGTGTGAACCGGCGAGAGGGGCCGTCGTGGATATCTTCCCTGGATGT
GGACCGAGGGGGAAACTTTATGGTGGCGGCGGGGGGGATGGAGGGTGGGA
TGGGGGGAGGAAAGCCGTCGTCTTGGGGCGTGCTCTCGGTCGTGCACCTA
CCAAGCTTCTCCATGGTCTCGGCGGCCCGAACTGATTGTGCGATCCAGGG
AGTCGCCTTTGAAGAGGAGAAAATCATCTCCGTTGGCAACGAGCGGCAGG
CCTTGCATTGGGCCCGGCCGGGCTTGGGCAAGGCGGCCAGAGTGACGACG
GATATCCCCTCCGTGTTCTCGGTCAACGTCCGCCGAAGCCCTCCCAACGG
GGACGGCGTCACGGTCTACGCCGGGCGCGCCGACCATGTGAGTGTTTTTG
TCCACCCGGAGCACTCTGCGTTCAATTTGAAATTCCGGTAG back to topCoding sequence (CDS) from alignment at CM002456.1:436926..439066- >rna795 ID=rna795|Name=rna795|organism=Nannochloropsis gaditana|type=CDS|length=3618bp|location=Sequence derived from alignment at CM002456.1:436926..439066- (Nannochloropsis gaditana)
CTTCTCCATGGTCTCGGCGGCCCGAACTGATTGTGCGATCCAGGGAGTCG
CCTTTGAAGAGGAGAAAATCATCTCCGTTGGCAACGAGCGGCAGGCCTTG
CATTGGGCCCGGCCGGGCTTGGGCAAGGCGGCCAGAGTGACGACGGATAT
CCCCTCCGTGTTCTCGGTCAACGTCCGCCGAAGCCCTCCCAACGGGGACG
GCGTCACGGTCTACGCCGGGCGCGCCGACCATGTGAGTGTTTTTGTCCAC
CCGGAGCACTCTGCGTTCAATTTGAAATTCCGGTAGGCGACTGCTTATTC
AAATCAAGTATACAGGTACAAGAATGCCGGATGATAGCCATTTCTTCGAT
GACGCCGCTTACATTTCCCACATCCGAGACGAAGCGGCGACCAAGGAGGC
CACCATATTCCATACTGCACACTGCCCACAAAATCGTTACCTCCTGGCCT
CGTCAAATAAAGGGAGAATCGCTATATGGGACTTGTCTTTTTACCTTTTC
CCAGCGGCATCCGCGTCTCTACTCACCACATGTCCTTCGCTATCGTTCGC
CTCAAGAGCCTCCCCTCTGCTCACACGTGGATTTTCACGCCACCTCCGTC
AGTATGAATGTCGGATGTTCCCCGCTGCATTACGACGAAAAGGTTTTCCA
TGCTTGAGCATACAAGTCTCTGAGCGGGCCATAAACCACGTAATGTTCCT
GGGTGAAGGCTCCACGAGTCCCTTACTGGTCTTGGCGGGCGACGACGGCA
TCTACGTATGGCCTTGGGCGCACATTTTGAAGCTCTTGAGTCAGGCCATT
GGGGAAGATGGGGGAATGGACCAGGATTGCACGCAGGGTATACCGGGAAA
CTCGTGTATAACGCAGGATCTTGGAGCTCCATCTGCCCTTCTCAAGGCTC
TCCCCTCCCAGGAGGCGTGGCCTTTCCTCACAGAGAGCAACCAAGTCGCG
CCCTCCTTTCATTCGTCTTCGTCCACCTCCCCCTCTGTCTGCTTTAGCGC
CTGTGGAGATGCGTTGGTTCGTCAATGGGACCTGGAGACACAGAAGTGCG
CGTCAGTCCTGATCGGGCACACCGGATGCGATTTCGAGTTTGCACAGCGG
ATGCATGCCATCGTAGCGTCCATGGTGGTAATACTTCTTCTTGCGATGAC
TTAGACACATCTGATATGAGCAGCGATTCACGATTCAGCAAGCTTCCCAA
AAAAAACTTCTCCATGGTCTCGGCGGCCCGAACTGATTGTGCGATCCAGG
GAGTCGCCTTTGAAGAGGAGAAAATCATCTCCGTTGGCAACGAGCGGCAG
GCCTTGCATTGGGCCCGGCCGGGCTTGGGCAAGGCGGCCAGAGTGACGAC
GGATATCCCCTCCGTGTTCTCGGTCAACGTCCGCCGAAGCCCTCCCAACG
GGGACGGCGTCACGGTCTACGCCGGGCGCGCCGACCATGTGAGTGTTTTT
GTCCACCCGGAGCACTCTGCGTTCAATTTGAAATTCCGGTAGGCGACTGC
TTATTCAAATCAAGTATACAGGTACAAGAATGCCGGATGATAGCCATTTC
TTCGATGACGCCGCTTACATTTCCCACATCCGAGACGAAGCGGCGACCAA
GGAGGCCACCATATTCCATACTGCACACTGCCCACAAAATCGTTACCTCC
TGGCCTCGTCAAATAAAGGGAGAATCGCTATATGGGACTTGTCTTTTTAC
CTTTTCCCAGCGGCATCCGCGTCTCTACTCACCACATGTCCTTCGCTATC
GTTCGCCTCAAGAGCCTCCCCTCTGCTCACACGTGGATTTTCACGCCACC
TCCGTCAGTATGAATGTCGGATGTTCCCCGCTGCATTACGACGAAAAGGT
TTTCCATGCTTGAGCATACAAGTCTCTGAGCGGGCCATAAACCACGTAAT
GTTCCTGGGTGAAGGCTCCACGAGTCCCTTACTGGTCTTGGCGGGCGACG
ACGGCATCTACGTATGGCCTTGGGCGCACATTTTGAAGCTCTTGAGTCAG
GCCATTGGGGAAGATGGGGGAATGGACCAGGATTGCACGCAGGGTATACC
GGGAAACTCGTGTATAACGCAGGATCTTGGAGCTCCATCTGCCCTTCTCA
AGGCTCTCCCCTCCCAGGAGGCGTGGCCTTTCCTCACAGAGAGCAACCAA
GTCGCGCCCTCCTTTCATTCGTCTTCGTCCACCTCCCCCTCTGTCTGCTT
TAGCGCCTGTGGAGATGCGTTGGTTCGTCAATGGGACCTGGAGACACAGA
AGTGCGCGTCAGTCCTGATCGGGCACACCGGATGCGATTTCGAGTTTGCA
CAGCGGATGCATGCCATCGTAGCGTCCATGGTGGTAATACTTCTTCTTGC
GATGACTTAGACACATCTGATATGAGCAGCGATTCACGATTCAGCAAGCT
TCCCAAAAAAAACTTCTCCATGGTCTCGGCGGCCCGAACTGATTGTGCGA
TCCAGGGAGTCGCCTTTGAAGAGGAGAAAATCATCTCCGTTGGCAACGAG
CGGCAGGCCTTGCATTGGGCCCGGCCGGGCTTGGGCAAGGCGGCCAGAGT
GACGACGGATATCCCCTCCGTGTTCTCGGTCAACGTCCGCCGAAGCCCTC
CCAACGGGGACGGCGTCACGGTCTACGCCGGGCGCGCCGACCATGTGAGT
GTTTTTGTCCACCCGGAGCACTCTGCGTTCAATTTGAAATTCCGGTAGGC
GACTGCTTATTCAAATCAAGTATACAGGTACAAGAATGCCGGATGATAGC
CATTTCTTCGATGACGCCGCTTACATTTCCCACATCCGAGACGAAGCGGC
GACCAAGGAGGCCACCATATTCCATACTGCACACTGCCCACAAAATCGTT
ACCTCCTGGCCTCGTCAAATAAAGGGAGAATCGCTATATGGGACTTGTCT
TTTTACCTTTTCCCAGCGGCATCCGCGTCTCTACTCACCACATGTCCTTC
GCTATCGTTCGCCTCAAGAGCCTCCCCTCTGCTCACACGTGGATTTTCAC
GCCACCTCCGTCAGTATGAATGTCGGATGTTCCCCGCTGCATTACGACGA
AAAGGTTTTCCATGCTTGAGCATACAAGTCTCTGAGCGGGCCATAAACCA
CGTAATGTTCCTGGGTGAAGGCTCCACGAGTCCCTTACTGGTCTTGGCGG
GCGACGACGGCATCTACGTATGGCCTTGGGCGCACATTTTGAAGCTCTTG
AGTCAGGCCATTGGGGAAGATGGGGGAATGGACCAGGATTGCACGCAGGG
TATACCGGGAAACTCGTGTATAACGCAGGATCTTGGAGCTCCATCTGCCC
TTCTCAAGGCTCTCCCCTCCCAGGAGGCGTGGCCTTTCCTCACAGAGAGC
AACCAAGTCGCGCCCTCCTTTCATTCGTCTTCGTCCACCTCCCCCTCTGT
CTGCTTTAGCGCCTGTGGAGATGCGTTGGTTCGTCAATGGGACCTGGAGA
CACAGAAGTGCGCGTCAGTCCTGATCGGGCACACCGGATGCGATTTCGAG
TTTGCACAGCGGATGCATGCCATCGTAGCGTCCATGGTGGTAATACTTCT
TCTTGCGATGACTTAGACACATCTGATATGAGCAGCGATTCACGATTCAG
CAAGCTTCCCAAAAAAAA back to top
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