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Properties
| Property Name | Value |
|---|
| Product | translocase of inner mitochondrial membrane 13 |
| Orig transcript id | gnl|cribi|Naga_100143g2.3776.mrna |
| Orig protein id | gnl|cribi|Naga_100143g2.3776 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:169741..171297 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7942 ID=rna7942|Name=rna7942|organism=Nannochloropsis gaditana|type=mRNA|length=984bp
CATACAGATATACCGCGCAGCCATGCAGAAGATAATTTTGTCAACGCCAT
TTTTTGGCACGGGAAACAGAGGCGTTTCGACCCCTCGCTTGGCGACGCTC
GAGAGAGCGCCCGCCCCAAATCCCCCCCGTGGCCTCTGAACAACAAAAGA
ACTTTATGAAAGCAGCGGACACAAAGTCACATTTCTTGCTTGAAGCGGCA
CAATTGAATGCAGCTGAGGAGCTGGGTGGAACGCTTGTGCCACATTACAT
GTGCTGGTAGTGATAAACGTTCGCTGTCTTATACGTACAATATCTGAGAA
GCCCTCCTAAGTCTGGAGGCCTTGCAATCGTCACTTCCCCAACTGACCGC
ACCTCTGTCGACATGGCACAGAAATTGACTCCTGATCAACAGGAGGCAGT
CATTCACAAGTTCCGAGCAGAGATGGCGGCTCAAGCCATGCAAGAATTGG
TTCAAAAGATGACGGACAAGTGCTTCAGCAAGTGTACGGGGAAAAGTGGG
AATCGACTGGATTCCAAGGAGCAGAACTGCGTCGCCATGTGCATGGACCG
GTATATCGAGACCATGAATGTAGTACAACATTCGCTTAGCGAGCGTAGTG
CCACGCGATGATTGCCTTGGGACGGATTTACAAGAAGAGGATAGGGGGAC
ATTTGTTGACAGCAAAACATCGCTTTTGGTGTGCATCAAAGTTAAATAGG
CATAACGCATTCCAAATATTCTTTACGGTTGCTCTTTTGAGTATCTTTTA
GATTGTGCTTTCTGTGGTGCTGCCTGTTTATGGGCTTGTCGCTTGTTTCA
AATGCATTATCATTTGATTTAAGGGATAAATTCAATCCTCAGAATGATTC
CGTGACCTATCTCAGGGTCTTTGCTTTGGTACTTTCCCTTCGATATATCT
TGCGAGTAACGTGGAGGAATAGAAGGCCAATCATACATCCCAGGTAATGT
ATGGCAGAATCGGCCGAGATCCGTGCCTTTGAAA back to topprotein sequence of rna7942 >rna7942-protein ID=rna7942-protein|Name=rna7942|organism=Nannochloropsis gaditana|type=polypeptide|length=114bp
MQLRSWVERLCHITCAGGLAIVTSPTDRTSVDMAQKLTPDQQEAVIHKFR
AEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETM
NVVQHSLSERSATR back to topmRNA from alignment at KK037247.1:169741..171297- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7942 ID=rna7942|Name=rna7942|organism=Nannochloropsis gaditana|type=mRNA|length=1557bp|location=Sequence derived from alignment at KK037247.1:169741..171297- (Nannochloropsis gaditana)
CCGCGCAGCCATGCAGAAGATAATTTTGTCAACGCCATTTTTTGGCACGG
GAAACAGAGGCGTTTCGACCCCTCGCTTGGCGACGCTCGAGAGAGCGCCC
GCCCCAAATCCCCCCCGTGGCCTCTGAACAACAAAAGAACTTTATGAAAG
CAGCGGACACAAAGTCACATTTCTTGCTTGAAGCGGCACAATTGAATGCA
GCTGAGGAGCTGGGTGGAACGCTTGTGCCACATTACATGTGCTGGTAGTG
ATAAACGTTCGCTGTCTTATACGTACAATATCTGAGAAGCCCTCCTAAGT
CTGGTACAACTTAAGTAGTGAAAAGCCCTTTAAAAAATCTGTTTTGGTCC
CACATATGCGCTAGAAGAGGACGTTCAACAAGTCTGACTCTCTATCTCCA
TGGCCCTGTCCTATATCGCTTGTCCTTGCTCACGACACAGGAGGCCTTGC
AATCGTCACTTCCCCAACTGACCGCACCTCTGTCGACATGGCACAGAAAT
TGACTCCTGATCAACAGGAGGCAGTCATTCACAAGGTGCGCACAATAGAA
ATTCAAAAACAAGTGTGGTGCATGTCTTTAATTTATTGTCTCCGTAGAGA
GGGGTATTGATGGGGAGCGGTACATGAAAAAGAGTCCTTGCGAAGTTTGC
GAATAAAAGTGTTAAAGTGAACGCACATTTAATAGCAATGTTGTGGAGAC
TACAGCCATTAGAGCAACCTTACAGAGATCTAGACACCAGGGACACACAT
TATCACCCGACGCAATGGCTGGGACTGACCATTATTTCCCTACCGCGACT
TTTTGGTAGTTCCGAGCAGAGATGGCGGCTCAAGCCATGCAAGAATTGGT
TCAAAAGATGACGGACAAGTGCTTCAGCAAGTGTACGGGGAAAAGTGGGA
ATCGACTGGATTCCAAGGTAAATTTCGGGTGTGGGGATGTTGGAAAAAGT
GCAAGGCAGAGATCCAGGTCGTTCTTGGAGGAGCACTGTTGCACGTTTGC
TCGAAGCGTTTCCGCAGTTTTGAACCCTCTTTTTTGACCCGCTTTTGGCG
CGATGCATTCCCATGTTTCCATTCGCAAATGCACTTGACAGGAGCAGAAC
TGCGTCGCCATGTGCATGGACCGGTATATCGAGACCATGAATGTAGTACA
ACATTCGCTTAGCGAGCGTAGTGCCACGCGATGATTGCCTTGGGACGGAT
TTACAAGAAGAGGATAGGGGGACATTTGTTGACAGCAAAACATCGCTTTT
GGTGTGCATCAAAGTTAAATAGGCATAACGCATTCCAAATATTCTTTACG
GTTGCTCTTTTGAGTATCTTTTAGATTGTGCTTTCTGTGGTGCTGCCTGT
TTATGGGCTTGTCGCTTGTTTCAAATGCATTATCATTTGATTTAAGGGAT
AAATTCAATCCTCAGAATGATTCCGTGACCTATCTCAGGGTCTTTGCTTT
GGTACTTTCCCTTCGATATATCTTGCGAGTAACGTGGAGGAATAGAAGGC
CAATCATACATCCCAGGTAATGTATGGCAGAATCGGCCGAGATCCGTGCC
TTTGAAA back to topCoding sequence (CDS) from alignment at KK037247.1:169741..171297- >rna7942 ID=rna7942|Name=rna7942|organism=Nannochloropsis gaditana|type=CDS|length=1380bp|location=Sequence derived from alignment at KK037247.1:169741..171297- (Nannochloropsis gaditana)
GAGCAGAACTGCGTCGCCATGTGCATGGACCGGTATATCGAGACCATGAA
TGTAGTACAACATTCGCTTAGCGAGCGTAGTGCCACGCGATGATTCCGAG
CAGAGATGGCGGCTCAAGCCATGCAAGAATTGGTTCAAAAGATGACGGAC
AAGTGCTTCAGCAAGTGTACGGGGAAAAGTGGGAATCGACTGGATTCCAA
GGAGGCCTTGCAATCGTCACTTCCCCAACTGACCGCACCTCTGTCGACAT
GGCACAGAAATTGACTCCTGATCAACAGGAGGCAGTCATTCACAAGATGC
AGCTGAGGAGCTGGGTGGAACGCTTGTGCCACATTACATGTGCTGGAGCA
GAACTGCGTCGCCATGTGCATGGACCGGTATATCGAGACCATGAATGTAG
TACAACATTCGCTTAGCGAGCGTAGTGCCACGCGATGATTCCGAGCAGAG
ATGGCGGCTCAAGCCATGCAAGAATTGGTTCAAAAGATGACGGACAAGTG
CTTCAGCAAGTGTACGGGGAAAAGTGGGAATCGACTGGATTCCAAGGAGG
CCTTGCAATCGTCACTTCCCCAACTGACCGCACCTCTGTCGACATGGCAC
AGAAATTGACTCCTGATCAACAGGAGGCAGTCATTCACAAGATGCAGCTG
AGGAGCTGGGTGGAACGCTTGTGCCACATTACATGTGCTGGAGCAGAACT
GCGTCGCCATGTGCATGGACCGGTATATCGAGACCATGAATGTAGTACAA
CATTCGCTTAGCGAGCGTAGTGCCACGCGATGATTCCGAGCAGAGATGGC
GGCTCAAGCCATGCAAGAATTGGTTCAAAAGATGACGGACAAGTGCTTCA
GCAAGTGTACGGGGAAAAGTGGGAATCGACTGGATTCCAAGGAGGCCTTG
CAATCGTCACTTCCCCAACTGACCGCACCTCTGTCGACATGGCACAGAAA
TTGACTCCTGATCAACAGGAGGCAGTCATTCACAAGATGCAGCTGAGGAG
CTGGGTGGAACGCTTGTGCCACATTACATGTGCTGGAGCAGAACTGCGTC
GCCATGTGCATGGACCGGTATATCGAGACCATGAATGTAGTACAACATTC
GCTTAGCGAGCGTAGTGCCACGCGATGATTCCGAGCAGAGATGGCGGCTC
AAGCCATGCAAGAATTGGTTCAAAAGATGACGGACAAGTGCTTCAGCAAG
TGTACGGGGAAAAGTGGGAATCGACTGGATTCCAAGGAGGCCTTGCAATC
GTCACTTCCCCAACTGACCGCACCTCTGTCGACATGGCACAGAAATTGAC
TCCTGATCAACAGGAGGCAGTCATTCACAAGATGCAGCTGAGGAGCTGGG
TGGAACGCTTGTGCCACATTACATGTGCTG back to top
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