rna7930, rna7930 (mRNA) Nannochloropsis gaditana

Overview
Namerna7930
Unique Namerna7930
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1150
Alignment locationKK037247.1:135163..136297 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100297g1.7169.mrna
Orig protein idgnl|cribi|Naga_100297g1.7169
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:135163..136297 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100297g1gene7681Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7930rna7930-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22761.1cds7908Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7930 ID=rna7930|Name=rna7930|organism=Nannochloropsis gaditana|type=mRNA|length=1150bp
CGTGTTGCCCTCCTTTTTGCTGTTTGTGGGCCGTTCTTTTTAGAAACATT
TCACCCGCGTGGCAAGGATTTTTTTTTTTTTGGCCAGTTTCTTGTACTGT
TCTGTCCTGTCTTCTCGCGAGCAAAATCATGTGTTGGCTATCGTGTGTGG
TGTGCTGAATAACAAAGTTTCGCGACGAGAAGCGTCGCCCTAAAAACCTT
CAACACACAGGCACGAGGTCGTCAGACCCAACTGCCCTTTCCCGTCCTTG
CCGTCCACTCTCCTCATGAATTCCATGGCATCTTTCGCATCTCTTCAACC
TGAAGCACACAAATGTCGTAGCAGGGGGCCATTATCGTTTTTCACCAAAG
GGGCTCCCACTGTGGTACCGGGAAGCCCAACTTTCTACATATTCCTTGCT
GACCCCTCGACCAAGACCGCGCTGCACAAACCCCAGCCGCGCGTTTCATC
GCTCGCTTTACCATGAAAAAGGACCACCCCGACTCACGCTCGCGTCCCGC
TCCCTTTCGAATCTCCATCCCGTCGTTGGTGGAGGCCGGGAGCCGGGAGC
AAGCCCAAGTAGGAAGACAGCCTGTCCCTCCTACCGTCCTCCTCCCAAGA
TCCACCCCAGCAACGACCGCGACGGCGCCTCCATACGCACCTTCCACGAA
TGGAAAGGGACCGGGAAGAGTGGAAGACGGTAGAGGTGGAGGGAGGCTTG
GAGAAGGGGGTGGGGGGGCCTCCCTTCCGCAGGCATCAGTACCCTGGGGG
CGTGGCCAAGAGGCAGTATTTGACGCGAAGCACCGAGGAAGCATGACCCT
CCCTATCCTTCCCCCGTCGCATAACCTCAGTGCAGGAGTCAATGTCATCA
GCGTCTCCCCACGCCAAGAAGGCAATCCGGTTTTGAAAAAAATCAAAAAC
GTGCGCTATCAGTTCATCCCTGGCATTGTCCCCGACTATGTGCTGGGCGC
GTACACATGCTGTATCTTTATCTCCCTTCGGTACCACCTTTTGCATGGCC
AATACCTGTTTCAGCGGGTGAAGGAATTGCGACGGTGAGATAGAAAGGAG
GGAGGGAGGAAGGGAGGGAAGGAGGGAGGGAGAGAGACGAAAGGTTTCGC
ATTTGCTGACCTGGCAGCAGTCCCACCACCGCTCCATCGTCTCAGAAACC
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protein sequence of rna7930

>rna7930-protein ID=rna7930-protein|Name=rna7930|organism=Nannochloropsis gaditana|type=polypeptide|length=214bp
HITSFLPSLPLTRPSLAPWSSPLLPPLPPSLTHSPLDMGEVRVQSLWSAF
HEPFIRQPSSLAANQLLPPPPSLPDSAKRSKRMHGAASAGKARKKPAKRG
KKEGEGRREDLEREPSDGETPVPLVSATASASMGSLGAAPAASGEEGISE
IPSSQAPAAWEWEGSETESEDEGKGEGERGGQGLLTSMDNDPLDYASDTD
ANEMRLLEEEGGLD
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mRNA from alignment at KK037247.1:135163..136297+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7930 ID=rna7930|Name=rna7930|organism=Nannochloropsis gaditana|type=mRNA|length=1135bp|location=Sequence derived from alignment at KK037247.1:135163..136297+ (Nannochloropsis gaditana)
CATATaacttccttccttccttccctccctctcacccggCCATCACTCGC
TCCTtggtcctctcccctcctcccccccctccctccctccctcactcact
cacCCCTAGACATGGGTGAAGTCAGGGTCCAGAGCCTATGGAGCGCCTTC
CACGAGCCTTTCATACGGCaaccctcctctctcgccgCCAACcaactcct
tcccccccctccctccctccctgactcTGCCAAGAGGAGCAAACGGATGC
ATGGGGCAGCCTCTGCCGGAAAAGCCCGGAAAAAACCGGCCAAgcgagga
aagaaagagggagagggaaggagagaggaccTCGAACGGGAGCCAAGCGA
TGGAGAAACGCCTGTCCCATTGGTCTCGGCGACCGCGTCAGCGTCAATGG
GAAGCCTGGGTGCGGCGCCAGCCGCCtcaggcgaggagggaatcTCAGAG
ATTCCCTCCAGTCAGGCCCCGGCGGCTTgggaatgggaagggagcgagac
AGAATCGGAGgatgaggggaagggggagggggaacggggtGGGCAGGGAC
TTCTGACGTCGATGGACAATGACCCGCTGGACTATGCTAGTGACACGGAC
GCCAACGAGATGCGtcttttggaggaggagggggggctagattgagggaa
aaagggagacaaCGGTGCCATACCCTCCATTATTTTTACAGCTTCGTTTT
GTCCCAGATGGAAGCTTTAGGAATTGAAACAACACCTGCACGAATTATCT
TGGGTCAGGTATCTGAAAACATCCTCGGGGGGGTCGTTGGATTCGACATC
ACGTATGAGACAACATGATCGTAAAGCGTACCGTAGGTGGCATTGTTAAA
TATATCTATATCGTCCACGTCACTGATGTTCGTGTTTAAAATTGATTGAA
GGTGAAGCATTTTATTGATCATTTAATTTGCTGATTGATTGATCATCGAG
TATTTTATGCCTCGAGAGGTACCTTCACAGCGCGTTGTGTGAATCCAGTA
TCCGATATTCATCCTCTCTACATAAGTCTTTACTTCTACAAAGCCCCATC
ATGCACGCTCTTTAGCATGTTTCCGCGTCGAACGATTCATCTAGACCACA
AACAATTAGTTTGATGACCTGTTGATCTTTCTCCA
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Coding sequence (CDS) from alignment at KK037247.1:135163..136297+

>rna7930 ID=rna7930|Name=rna7930|organism=Nannochloropsis gaditana|type=CDS|length=645bp|location=Sequence derived from alignment at KK037247.1:135163..136297+ (Nannochloropsis gaditana)
CATATaacttccttccttccttccctccctctcacccggCCATCACTCGC
TCCTtggtcctctcccctcctcccccccctccctccctccctcactcact
cacCCCTAGACATGGGTGAAGTCAGGGTCCAGAGCCTATGGAGCGCCTTC
CACGAGCCTTTCATACGGCaaccctcctctctcgccgCCAACcaactcct
tcccccccctccctccctccctgactcTGCCAAGAGGAGCAAACGGATGC
ATGGGGCAGCCTCTGCCGGAAAAGCCCGGAAAAAACCGGCCAAgcgagga
aagaaagagggagagggaaggagagaggaccTCGAACGGGAGCCAAGCGA
TGGAGAAACGCCTGTCCCATTGGTCTCGGCGACCGCGTCAGCGTCAATGG
GAAGCCTGGGTGCGGCGCCAGCCGCCtcaggcgaggagggaatcTCAGAG
ATTCCCTCCAGTCAGGCCCCGGCGGCTTgggaatgggaagggagcgagac
AGAATCGGAGgatgaggggaagggggagggggaacggggtGGGCAGGGAC
TTCTGACGTCGATGGACAATGACCCGCTGGACTATGCTAGTGACACGGAC
GCCAACGAGATGCGtcttttggaggaggagggggggctagattga
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Synonyms
Publications