EWM22761.1, cds7908 (CDS) Nannochloropsis gaditana

Overview
NameEWM22761.1
Unique Namecds7908
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:135163..135807 +

Link to JBrowse

Properties
Property NameValue
Start range135163
Start range.
Protein idEWM22761.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100297g1.7169.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:135163..135807 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22761.1 vs. NCBI_GenBank
Match: gi|585103363|gb|EWM22761.1| (hypothetical protein Naga_100297g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 417.157 bits (1071), Expect = 3.303e-147
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 
Query:    1 HITSFLPSLPLTRPSLAPWSSPLLPPLPPSLTHSPLDMGEVRVQSLWSAFHEPFIRQPSSLAANQLLPPPPSLPDSAKRSKRMHGAASAGKARKKPAKRGKKEGEGRREDLEREPSDGETPVPLVSATASASMGSLGAAPAASGEEGISEIPSSQAPAAWEWEGSETESEDEGKGEGERGGQGLLTSMDNDPLDYASDTDANEMRLLEEEGGLD 214
            HITSFLPSLPLTRPSLAPWSSPLLPPLPPSLTHSPLDMGEVRVQSLWSAFHEPFIRQPSSLAANQLLPPPPSLPDSAKRSKRMHGAASAGKARKKPAKRGKKEGEGRREDLEREPSDGETPVPLVSATASASMGSLGAAPAASGEEGISEIPSSQAPAAWEWEGSETESEDEGKGEGERGGQGLLTSMDNDPLDYASDTDANEMRLLEEEGGLD
Sbjct:    1 HITSFLPSLPLTRPSLAPWSSPLLPPLPPSLTHSPLDMGEVRVQSLWSAFHEPFIRQPSSLAANQLLPPPPSLPDSAKRSKRMHGAASAGKARKKPAKRGKKEGEGRREDLEREPSDGETPVPLVSATASASMGSLGAAPAASGEEGISEIPSSQAPAAWEWEGSETESEDEGKGEGERGGQGLLTSMDNDPLDYASDTDANEMRLLEEEGGLD 214
The following BLAST results are available for this feature:
BLAST of EWM22761.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103363|gb|EWM22761.1|3.303e-147100.00hypothetical protein Naga_100297g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7930rna7930Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications