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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101279g1.9613.mrna |
| Orig protein id | gnl|cribi|Naga_101279g1.9613 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:92204..93202 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7919 ID=rna7919|Name=rna7919|organism=Nannochloropsis gaditana|type=mRNA|length=704bp
TGCCAACGTCGGCATGCATGACGCCCCAGAGGACGCGGTGACCACGTCCG
GCCCCGCCCCCCTCAACGCCCGGATCGACGCTAGCCGTATCGCCTCGGCC
ATTTCCTATTTCCGTGGTCGGAGCATTGGTGTCGCCGCCTTCATTCCCGC
CTATGCGCTGCGACGAAAAGGTCCCGGGGGAGGGAGGGCGGGAGGGCGGG
AAGGCGGGGGTGGAAATGTGATGATGCAAACAGAGGCCCAGGAATCCCTG
CAGTCCATGGTAGATAGACGGTGGTTGGCGACCATCCCGCCCACGGATAA
CGACGACCTTTACATCTTGGAGTTCGCGCGGGAAAAGAACGCCCTCGTCC
TCTCGAATGACTGCTTTCGAGACCATTGCGCCCGGGACCCGTCCTTGCGT
CCATTCCTGCAACGCAACCGGGTGTCTTACACGTTCTTTGCGAACGATTT
TTTGCCCAATCCGGGGCATGTGGGCTTGCAGGCTCTGAAATCGAGAAGGA
ATGAGGAACAGAAGGAGATCGGAAGGCACTAGACTAGGTGGGAATACTGA
GGAGTGTGGAGCGTTGGTTGGGGAAAACTCTGATAATATGCTTGACGACC
CATGTTGAAAGGTGGGGAGTGAAGCGTCCGAAAAATGCAATTGCAGCTTA
ATGTAGATAGTTCAGTCTTTACACTGTGAAGTAAGCAAGCGAATTATGTA
TTTT back to topprotein sequence of rna7919 >rna7919-protein ID=rna7919-protein|Name=rna7919|organism=Nannochloropsis gaditana|type=polypeptide|length=202bp
MRPHLYLAPFIFAGGCSFDQVDESIDGKDHSQARKKQIFQAIILPAPEAL
KQSLRVVLPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELR
RRQTRAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVV
VEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPSP
ST back to topmRNA from alignment at KK037247.1:92204..93202+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7919 ID=rna7919|Name=rna7919|organism=Nannochloropsis gaditana|type=mRNA|length=999bp|location=Sequence derived from alignment at KK037247.1:92204..93202+ (Nannochloropsis gaditana)
ATGAGGCCTCACTTGTATCTTGCTCCTTTTATTTTCGCAGGTGGTTGCAG
CTTTGACCAGGTTGATGAATCGATTGATGGAAAAGACCACAGCCAAGCGC
GAAAGAAGGTAAGTAGGAAAGAAGCGGAAACGGCAGTTATCCTGGGTTAA
AATCTGTTGACTTACTTCAATGCGCTCTAGCAAGATACGAGTGATGACAA
GCAAACGGCGATATATTGGGCTCAGGACTTCGTCGAATGCTTCATCTAAC
ACATTCCATGGGGCATCAGCAGATATTTCAAGCAATAATACTGCCAGCTC
CAGAAGCATTGAAACAAAGTTTACGAGTCGTTCTGCCCGCAAAATGTCAG
CATCTTAAGCCTCCTGGTCGGTTTCAGCTGACAAAATACTTAGGGATGAA
AGTGAGCAATTCCATGGCAATCAgtcaagcctcctcctttgccgaTCCCG
AGGAGCTCCGTCGACGCCAAACGCGCGCGGCTCGTttcggcccctccctg
tccaccTCGGtgccctcaccctccacTTCTACACACCCTGCGacgctgaa
gaagaaagaatcTCGGAAAGGCCAAGTGCGGTACGGGCCAGTGGTGGGGA
CTTGTGTTGTGGTGGAGAAAGACTACACGCGGTCGGCGGACGATTTCGAC
CCTGCCTTGGTGCGGCCGCCACCTGTACTGCaggaggtaggaagaggaag
aggggacaaAAAGGCGATagacaaaggaaaaaaagaaagataAAAATAGC
AGCAGTGGCTCTGTAAAGGGAGCATGCGGGTCTCCGTGAGCCAGTCATAG
TCTGATGgtgctcccctcccatctctcTGACGGCGTCatcgcctttcctc
ctttccccccctcttcttccaggcGCTGCGCTGCGTAAAAGCCCATTGGG
CAAAGCACGAGGACTATGCACATGCCTGCTCCCAGTTGAAAAGCATCCGG
CAGGATTTACGGGTGCagcacgtggaggacgccTTCGCCGTCcacgtga back to topCoding sequence (CDS) from alignment at KK037247.1:92204..93202+ >rna7919 ID=rna7919|Name=rna7919|organism=Nannochloropsis gaditana|type=CDS|length=2436bp|location=Sequence derived from alignment at KK037247.1:92204..93202+ (Nannochloropsis gaditana)
ATGAGGCCTCACTTGTATCTTGCTCCTTTTATTTTCGCAGGTGGTTGCAG
CTTTGACCAGGTTGATGAATCGATTGATGGAAAAGACCACAGCCAAGCGC
GAAAGAAGCAGATATTTCAAGCAATAATACTGCCAGCTCCAGAAGCATTG
AAACAAAGTTTACGAGTCGTTCTGCCCGCAAAATGTCAGCATCTTAAGCC
TCCTGGTCGGTTTCAGCTGACAAAATACTTAGGGATGAAAGTGAGCAATT
CCATGGCAATCAgtcaagcctcctcctttgccgaTCCCGAGGAGCTCCGT
CGACGCCAAACGCGCGCGGCTCGTttcggcccctccctgtccaccTCGGt
gccctcaccctccacTTCTACACACCCTGCGacgctgaagaagaaagaat
cTCGGAAAGGCCAAGTGCGGTACGGGCCAGTGGTGGGGACTTGTGTTGTG
GTGGAGAAAGACTACACGCGGTCGGCGGACGATTTCGACCCTGCCTTGGT
GCGGCCGCCACCTGTACTGCaggaggcGCTGCGCTGCGTAAAAGCCCATT
GGGCAAAGCACGAGGACTATGCACATGCCTGCTCCCAgacgccTTCGCCG
TCcacgtgaATGAGGCCTCACTTGTATCTTGCTCCTTTTATTTTCGCAGG
TGGTTGCAGCTTTGACCAGGTTGATGAATCGATTGATGGAAAAGACCACA
GCCAAGCGCGAAAGAAGCAGATATTTCAAGCAATAATACTGCCAGCTCCA
GAAGCATTGAAACAAAGTTTACGAGTCGTTCTGCCCGCAAAATGTCAGCA
TCTTAAGCCTCCTGGTCGGTTTCAGCTGACAAAATACTTAGGGATGAAAG
TGAGCAATTCCATGGCAATCAgtcaagcctcctcctttgccgaTCCCGAG
GAGCTCCGTCGACGCCAAACGCGCGCGGCTCGTttcggcccctccctgtc
caccTCGGtgccctcaccctccacTTCTACACACCCTGCGacgctgaaga
agaaagaatcTCGGAAAGGCCAAGTGCGGTACGGGCCAGTGGTGGGGACT
TGTGTTGTGGTGGAGAAAGACTACACGCGGTCGGCGGACGATTTCGACCC
TGCCTTGGTGCGGCCGCCACCTGTACTGCaggaggcGCTGCGCTGCGTAA
AAGCCCATTGGGCAAAGCACGAGGACTATGCACATGCCTGCTCCCAgacg
ccTTCGCCGTCcacgtgaATGAGGCCTCACTTGTATCTTGCTCCTTTTAT
TTTCGCAGGTGGTTGCAGCTTTGACCAGGTTGATGAATCGATTGATGGAA
AAGACCACAGCCAAGCGCGAAAGAAGCAGATATTTCAAGCAATAATACTG
CCAGCTCCAGAAGCATTGAAACAAAGTTTACGAGTCGTTCTGCCCGCAAA
ATGTCAGCATCTTAAGCCTCCTGGTCGGTTTCAGCTGACAAAATACTTAG
GGATGAAAGTGAGCAATTCCATGGCAATCAgtcaagcctcctcctttgcc
gaTCCCGAGGAGCTCCGTCGACGCCAAACGCGCGCGGCTCGTttcggccc
ctccctgtccaccTCGGtgccctcaccctccacTTCTACACACCCTGCGa
cgctgaagaagaaagaatcTCGGAAAGGCCAAGTGCGGTACGGGCCAGTG
GTGGGGACTTGTGTTGTGGTGGAGAAAGACTACACGCGGTCGGCGGACGA
TTTCGACCCTGCCTTGGTGCGGCCGCCACCTGTACTGCaggaggcGCTGC
GCTGCGTAAAAGCCCATTGGGCAAAGCACGAGGACTATGCACATGCCTGC
TCCCAgacgccTTCGCCGTCcacgtgaATGAGGCCTCACTTGTATCTTGC
TCCTTTTATTTTCGCAGGTGGTTGCAGCTTTGACCAGGTTGATGAATCGA
TTGATGGAAAAGACCACAGCCAAGCGCGAAAGAAGCAGATATTTCAAGCA
ATAATACTGCCAGCTCCAGAAGCATTGAAACAAAGTTTACGAGTCGTTCT
GCCCGCAAAATGTCAGCATCTTAAGCCTCCTGGTCGGTTTCAGCTGACAA
AATACTTAGGGATGAAAGTGAGCAATTCCATGGCAATCAgtcaagcctcc
tcctttgccgaTCCCGAGGAGCTCCGTCGACGCCAAACGCGCGCGGCTCG
TttcggcccctccctgtccaccTCGGtgccctcaccctccacTTCTACAC
ACCCTGCGacgctgaagaagaaagaatcTCGGAAAGGCCAAGTGCGGTAC
GGGCCAGTGGTGGGGACTTGTGTTGTGGTGGAGAAAGACTACACGCGGTC
GGCGGACGATTTCGACCCTGCCTTGGTGCGGCCGCCACCTGTACTGCagg
aggcGCTGCGCTGCGTAAAAGCCCATTGGGCAAAGCACGAGGACTATGCA
CATGCCTGCTCCCAgacgccTTCGCCGTCcacgtga back to top
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