EWM22777.1, cds7897 (CDS) Nannochloropsis gaditana

Overview
NameEWM22777.1
Unique Namecds7897
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:92204..92311 +
Alignment locationKK037247.1:92473..92889 +
Alignment locationKK037247.1:93076..93137 +
Alignment locationKK037247.1:93181..93202 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22777.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101279g1.9613.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:92204..92311 +
KK037247.1supercontigKK037247.1:92473..92889 +
KK037247.1supercontigKK037247.1:93076..93137 +
KK037247.1supercontigKK037247.1:93181..93202 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|585103385|gb|EWM22777.1| (hypothetical protein Naga_101279g1 [Nannochloropsis gaditana])

HSP 1 Score: 416.001 bits (1068), Expect = 3.340e-147
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
Query:    1 MRPHLYLAPFIFAGGCSFDQVDESIDGKDHSQARKKQIFQAIILPAPEALKQSLRVVLPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQTRAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPSPST 202
            MRPHLYLAPFIFAGGCSFDQVDESIDGKDHSQARKKQIFQAIILPAPEALKQSLRVVLPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQTRAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPSPST
Sbjct:    1 MRPHLYLAPFIFAGGCSFDQVDESIDGKDHSQARKKQIFQAIILPAPEALKQSLRVVLPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQTRAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPSPST 202          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|553184040|ref|XP_005854016.1| (leukocyte receptor cluster member 8-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295046|gb|EKU22345.1| leukocyte receptor cluster member 8-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 360.147 bits (923), Expect = 3.945e-125
Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0
Query:   18 FDQVDESIDGKDHSQARKKQIFQAIILPAPEALKQSLRVVLPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQTRAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            FDQVDESIDGKDHSQARKK IFQAIILPAPEALKQSLRVVLPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQ RAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQ  S
Sbjct:    1 FDQVDESIDGKDHSQARKK-IFQAIILPAPEALKQSLRVVLPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQARAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQLKS 181          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|1069945793|ref|XP_018294770.1| (hypothetical protein PHYBLDRAFT_142244 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026592277|gb|OAD76730.1| hypothetical protein PHYBLDRAFT_142244 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 78.1814 bits (191), Expect = 1.647e-13
Identity = 43/122 (35.25%), Postives = 61/122 (50.00%), Query Frame = 0
Query:   80 KVSNSMAISQASSFADPEELRRRQTRAARFGPSLSTSVPSPSTSTHPATLKKKESRKGQVRY--GPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            K+S    ++ A     PEE RRR+ RA RF          P     P +L+ K    G+  +   PVVGTC  +EK Y R     +P+ VRP P+L++A R V  +W  ++DY + C Q  S
Sbjct:   89 KLSTKRDLNMADIEDTPEEKRRRELRAKRFEDD------HPVEHIQPTSLELKVDGNGEEYWHGKPVVGTCTSLEKQYLRITSAVNPSTVRPLPILKQAFRYVTTYWNTYKDYTYTCDQMKS 204          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|1178056700|gb|ORE12045.1| (hypothetical protein BCV72DRAFT_196576 [Rhizopus microsporus var. microsporus])

HSP 1 Score: 70.4774 bits (171), Expect = 8.861e-11
Identity = 52/176 (29.55%), Postives = 78/176 (44.32%), Query Frame = 0
Query:   46 APEALKQSLRVV-------------------LPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQTRAARF--GPSLSTSVPSPSTSTHPAT-LKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            +P ALKQ L+V+                   LP+ C + K P    L    G K++  +   + +    P E+ RR+ RA RF   P L+++  SP       T +       GQ    P+VGT   +EK Y R     DPA VRP  +LQ+  + ++  W K  +Y++ C Q  S
Sbjct:   28 SPPALKQQLKVIIQQARNTGMIDLIDWSERDLPSACDNRKNPNASSLPHKTGKKITKGIGNIELT----PAEILRREQRAMRFQSDPVLASNNNSPRLKKKNITPIVWDLDSPGQPSTKPIVGTSTALEKPYLRLTSAPDPATVRPLDILQKTFKLLRKKWKKEANYSYICEQFKS 199          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|1178057640|gb|ORE12511.1| (hypothetical protein BCV71DRAFT_190911 [Rhizopus microsporus])

HSP 1 Score: 70.0922 bits (170), Expect = 1.074e-10
Identity = 56/195 (28.72%), Postives = 85/195 (43.59%), Query Frame = 0
Query:   34 RKKQIFQAIILP--APEALKQSLRVV-------------------LPAKCQHLKPPGRFQLTKYLGMKVSNSMAISQASSFADPEELRRRQTRAARFGPSLSTSVPSPSTSTHPATLKKKE--------SRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            +K+++    IL   +P ALKQ L+V+                   LP+ C   K P    L    G K++  +   + +    P E+ RR+ RA RF      S P  +++ +   LKKK            GQ    P+VGT   +EK Y R     DPA VRP  +LQ+  + ++  W K  +Y++ C Q  S
Sbjct:   14 KKQKVIDKSILSQDSPPALKQQLKVIIQQARNTGMIDLIDWSERDLPSACDDRKNPNASSLPHKTGKKITKGIGNIELT----PAEMLRREQRAMRF-----QSDPVLASNNNNPRLKKKNITPIVWDLDSPGQPSTKPIVGTSTALEKPYLRLTSAPDPATVRPLDILQKTFKLLRKKWKKEANYSYICEQFKS 199          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|1169041544|ref|XP_020473242.1| (leukocyte receptor cluster member 8 [Monopterus albus])

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-10
Identity = 44/109 (40.37%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   93 FADPEELRRRQTRAARFGPSLSTS--VPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            F DP    ++Q+RAARF   L +   V S ST   P   ++  S +      P+VGTC  + K Y R     DP+ VRP  VL+++++ VKAHW  H+DYA+AC Q  S
Sbjct:  483 FHDPNREAKKQSRAARFHKQLRSEPLVLSISTLDLPDGTQECLSWED----CPIVGTCQDITKSYLRLTCAPDPSTVRPVHVLRKSMQAVKAHWKTHQDYAYACEQMKS 587          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|928072685|ref|XP_013886174.1| (PREDICTED: leukocyte receptor cluster member 8 [Austrofundulus limnaeus])

HSP 1 Score: 69.707 bits (169), Expect = 2.035e-10
Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = 0
Query:   88 SQASSFADPEELRRRQTRAARFGPSLSTS--VPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            S    F DP    ++Q+RAARF   L +   V S ST   P   ++  S +      P+VG+C  + K Y R     DP  VRP  VL+++L+ VKAHW  H+DYA+AC Q  S
Sbjct:  537 SAGMDFHDPNREAKKQSRAARFHKQLRSEPLVLSVSTLDLPDGTQEGLSWED----CPIVGSCQDITKSYLRLTCAPDPCTVRPVQVLRKSLQSVKAHWKTHQDYAYACEQMKS 646          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|1041096733|ref|XP_017271053.1| (PREDICTED: leukocyte receptor cluster member 8 [Kryptolebias marmoratus])

HSP 1 Score: 69.3218 bits (168), Expect = 2.760e-10
Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 0
Query:   88 SQASSFADPEELRRRQTRAARFGPSLSTS--VPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            S    F DP    ++Q+RAARF   L +   V S S+   P   ++  S +      P+VG+C  + K Y R     DP+ VRP  VL+++L+ VKAHW  H+DYA+AC Q  S
Sbjct:  538 SAGMDFHDPNREAKKQSRAARFHKQLRSEPLVLSVSSLDLPDGTQEGLSWED----CPIVGSCQDITKSYLRLTCAPDPSTVRPVQVLRKSLQAVKAHWKTHQDYAYACEQMKS 647          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|1201817087|ref|XP_021238856.1| (leukocyte receptor cluster member 8-like, partial [Numida meleagris])

HSP 1 Score: 68.5514 bits (166), Expect = 4.158e-10
Identity = 45/121 (37.19%), Postives = 58/121 (47.93%), Query Frame = 0
Query:   90 ASSFADPEELRRRQTRAARFGPS-----------LSTSVPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            A  + DPE+  ++Q RAARF              L    P P  +  P   + K           ++GTC  + K Y R     DPA VRP PVLQ++L  VKAHW +H+DYA AC Q  S
Sbjct:  210 AMDYEDPEKEFKKQRRAARFQHGHPKKLRPEPLVLPIHAPEPPGAETPDWRELK-----------ILGTCQDITKRYLRLTCAPDPATVRPVPVLQKSLSVVKAHWREHQDYAFACEQLKS 319          
BLAST of EWM22777.1 vs. NCBI_GenBank
Match: gi|657560645|ref|XP_008284050.1| (PREDICTED: leukocyte receptor cluster member 8 isoform X2 [Stegastes partitus])

HSP 1 Score: 68.5514 bits (166), Expect = 4.741e-10
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   93 FADPEELRRRQTRAARFGPSLSTS--VPSPSTSTHPATLKKKESRKGQVRYGPVVGTCVVVEKDYTRSADDFDPALVRPPPVLQEALRCVKAHWAKHEDYAHACSQTPS 199
            F DP    ++Q+RAARF   L +   + S +    P   ++  S +      P+VGTC  + K Y R     DP+ VRP  VL+++L+ VKAHW  H+DYA+AC Q  S
Sbjct:  540 FHDPNREAKKQSRAARFHKQLRSEPLILSINALDLPDGTQEGLSWED----CPIVGTCQDITKHYLRLTCAPDPSTVRPVHVLRKSLQAVKAHWKTHQDYAYACEQMKS 644          
The following BLAST results are available for this feature:
BLAST of EWM22777.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103385|gb|EWM22777.1|3.340e-147100.00hypothetical protein Naga_101279g1 [Nannochloropsi... [more]
gi|553184040|ref|XP_005854016.1|3.945e-12597.80leukocyte receptor cluster member 8-like protein, ... [more]
gi|1069945793|ref|XP_018294770.1|1.647e-1335.25hypothetical protein PHYBLDRAFT_142244 [Phycomyces... [more]
gi|1178056700|gb|ORE12045.1|8.861e-1129.55hypothetical protein BCV72DRAFT_196576 [Rhizopus m... [more]
gi|1178057640|gb|ORE12511.1|1.074e-1028.72hypothetical protein BCV71DRAFT_190911 [Rhizopus m... [more]
gi|1169041544|ref|XP_020473242.1|1.808e-1040.37leukocyte receptor cluster member 8 [Monopterus al... [more]
gi|928072685|ref|XP_013886174.1|2.035e-1039.47PREDICTED: leukocyte receptor cluster member 8 [Au... [more]
gi|1041096733|ref|XP_017271053.1|2.760e-1038.60PREDICTED: leukocyte receptor cluster member 8 [Kr... [more]
gi|1201817087|ref|XP_021238856.1|4.158e-1037.19leukocyte receptor cluster member 8-like, partial ... [more]
gi|657560645|ref|XP_008284050.1|4.741e-1038.53PREDICTED: leukocyte receptor cluster member 8 iso... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7919rna7919Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications