rna7898, rna7898 (mRNA) Nannochloropsis gaditana

Overview
Namerna7898
Unique Namerna7898
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length775
Alignment locationKK037247.1:56200..56631 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102867g1.7052.mrna
Orig protein idgnl|cribi|Naga_102867g1.7052
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:56200..56631 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102867g1gene7650Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7898rna7898-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22797.1cds7876Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7898 ID=rna7898|Name=rna7898|organism=Nannochloropsis gaditana|type=mRNA|length=775bp
ATGCGTTGGAATGCGGCAGGTCAATTGGATTAACATTAACCCGTTTTCGT
CTTACGTTGCGGACAGGACCATCAGAACAAATCGTGTGGTGCACTGGGCA
TGGCGACTTTGTCAAGGGAGGAGGACGGGACGCAGCCAGAGCTGTCCCGT
GAATGGTCGAAGGAGGAAATGAGGGAGGAAGACCTGAACGATTCATCTTA
TATGGGTGTGATGTCATTCCATTCTCAAGGAGGGCCGATGGACGAGGAGA
GGGTGGCAGGGGATGCAGGAGGTAGGTTGAAAAGGACGAAGGCTAGCACG
TCCCGGCCCTTTCCTCCCTCTCACACCGTCCTTTATCATAATCAAGGGCA
CGGATTCGAGGACGAGAGCAATCTTTCCGCCTCCTCCCTCACCTCCTTGT
CCCTCCCTTCGCCCTCCTCCTCCGCGCTGGCTCCCTTCCAAGGCCGGGAC
TCCTCCCTCCAGGGTGAAAGCGGCCCCGGCCGGGCGCCTCACGAACACCT
TTCATCCAACGACGTAAGTGCTACAGCCATGGAGTCTATGCAGACCGAGG
CCGTGGGCACCGTGCCGCCAGCAGAGAGCATGGGCGATGAATACAAGCGG
ATGGCCGCCCAGAAGGCGCAAAGGGAGAGGCGGTATCAGGCGCTTGTCAC
CTCCAAAGAGCATGCCCGCAGGAATTTTCCCCGCATGCGTCGGATTTACA
CTGACTATCACTTGAAGGTGATGGTGGCTGGCGAGGCGGGGCATGGGAAG
ACCACGTGCGTGAGGGAGGAAGGGA
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protein sequence of rna7898

>rna7898-protein ID=rna7898-protein|Name=rna7898|organism=Nannochloropsis gaditana|type=polypeptide|length=95bp
MERVHYTIQDTPGFGDDTDIARSIELIIKYIDGCNQVLVLPFPPPLPPSL
PPSTSVFKPLPRGRGGPPPHLPPRENDRRRRAGGCMPLFPGCAST
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mRNA from alignment at KK037247.1:56200..56631+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7898 ID=rna7898|Name=rna7898|organism=Nannochloropsis gaditana|type=mRNA|length=432bp|location=Sequence derived from alignment at KK037247.1:56200..56631+ (Nannochloropsis gaditana)
atggagcGCGTGCATTACACCATCCAGGACACGCCCGGTTTCGGCGACGA
CACGGATATAGCCCGGTCGATTGAGCTAATTATCAAGTACATCGATGGAT
GCAATCAGGTGcttgtccttccttttcctcccccccttcctccctccctc
cccccctctacCTCGGTGTTCAAGCGTGCTTGGGTTACTGCTTTTCACGA
TGTTTTCTTAGCGATCATTTTCGTTTGCCTAGACCTTCCCTTTGCTctga
cctccctctccttgttaCCCAAtcccttccgctccctctttccctccctc
cctccctccctccctccagcgcTACCTAGAGGCCGAGGAGGACCCCCACC
GCACCTGCCCCCTCGGGAAAATGACCGGAGGAGACGCGCGGGTGGATGTA
TGCCTCTATTTCCTGGCTGCGCATCGACTTAA
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Coding sequence (CDS) from alignment at KK037247.1:56200..56631+

>rna7898 ID=rna7898|Name=rna7898|organism=Nannochloropsis gaditana|type=CDS|length=576bp|location=Sequence derived from alignment at KK037247.1:56200..56631+ (Nannochloropsis gaditana)
atggagcGCGTGCATTACACCATCCAGGACACGCCCGGTTTCGGCGACGA
CACGGATATAGCCCGGTCGATTGAGCTAATTATCAAGTACATCGATGGAT
GCAATCAGGTGcttgtccttccttttcctcccccccttcctccctccctc
cccccctctacCTCGGTGTTCAAGCcgcTACCTAGAGGCCGAGGAGGACC
CCCACCGCACCTGCCCCCTCGGGAAAATGACCGGAGGAGACGCGCGGGTG
GATGTATGCCTCTATTTCCTGGCTGCGCATCGACTTAAatggagcGCGTG
CATTACACCATCCAGGACACGCCCGGTTTCGGCGACGACACGGATATAGC
CCGGTCGATTGAGCTAATTATCAAGTACATCGATGGATGCAATCAGGTGc
ttgtccttccttttcctcccccccttcctccctccctccccccctctacC
TCGGTGTTCAAGCcgcTACCTAGAGGCCGAGGAGGACCCCCACCGCACCT
GCCCCCTCGGGAAAATGACCGGAGGAGACGCGCGGGTGGATGTATGCCTC
TATTTCCTGGCTGCGCATCGACTTAA
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Synonyms
Publications