EWM22797.1, cds7876 (CDS) Nannochloropsis gaditana

Overview
NameEWM22797.1
Unique Namecds7876
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:56200..56374 +
Alignment locationKK037247.1:56519..56631 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22797.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102867g1.7052.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:56200..56374 +
KK037247.1supercontigKK037247.1:56519..56631 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22797.1 vs. NCBI_GenBank
Match: gi|585103419|gb|EWM22797.1| (hypothetical protein Naga_102867g1 [Nannochloropsis gaditana])

HSP 1 Score: 190.274 bits (482), Expect = 2.668e-61
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MERVHYTIQDTPGFGDDTDIARSIELIIKYIDGCNQVLVLPFPPPLPPSLPPSTSVFKPLPRGRGGPPPHLPPRENDRRRRAGGCMPLFPGCAST 95
            MERVHYTIQDTPGFGDDTDIARSIELIIKYIDGCNQVLVLPFPPPLPPSLPPSTSVFKPLPRGRGGPPPHLPPRENDRRRRAGGCMPLFPGCAST
Sbjct:    1 MERVHYTIQDTPGFGDDTDIARSIELIIKYIDGCNQVLVLPFPPPLPPSLPPSTSVFKPLPRGRGGPPPHLPPRENDRRRRAGGCMPLFPGCAST 95
The following BLAST results are available for this feature:
BLAST of EWM22797.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103419|gb|EWM22797.1|2.668e-61100.00hypothetical protein Naga_102867g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7898rna7898Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications