rna7876, rna7876 (mRNA) Nannochloropsis gaditana

Overview
Namerna7876
Unique Namerna7876
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1296
Alignment locationCM002475.1:46370..47771 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100375g6.1528.mrna
Orig protein idgnl|cribi|Naga_100375g6.1528
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:46370..47771 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100375g6gene7629Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7876rna7876-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22824.1cds7854Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7876 ID=rna7876|Name=rna7876|organism=Nannochloropsis gaditana|type=mRNA|length=1296bp
ATGGTGCAAGCAAAAGACGGCGTAATAAGGGAGGGCGAGAGTCATGAGGT
CATCGTTGTTGGGGCGGGAGTTGCTGGAATGGCCGCAGCCCACACGCTTC
GACAAACGTACAACATCCACGACGTGGTAATTCTGGAAGCGCGAGGACGA
ACCGGGGGGCGCGTGCACACGAACAAACAGGGTATTGACGAGGGTGCGTC
CTGGGTCTATAGTCCCGAGAAGCATGCGTTGGTTCAGGCGGTGGGGAAAG
GAATAGGAGACGCACGGCTGGTGCAGATGGCAGACCCGACAGACACCGTG
AATTGCACGGTGGAGAACGCAAGAATGAGGGTGTGGGATGCCGCCACAGG
GGAAGAAGTCCCCAGGGAGGAGGTGCGGGCAGGGGAGGAGAAGTTCAACG
AGATCCTCGGGCGGGTGGGGAAGGAGGTACAGCCGGGTGAAGGGGGGGAA
GGGGGGGAAAGTCTGGAGGCAGCTTTGCTTCGAACTACAGAAGGGCAGGA
TGCGACTGCTCTGTTCCGCTGGCAGCGCGCACGGTTCGAGGGGTGGGTGG
GGGGAACTCTGGGTGCGGTCTCTAGCCGGGAGGCAGACTCGTTCTACGGG
CACGAGGGCGGGCATGAGGGGCGGGACTGGTGCCTTCAGGGGGGATATGG
GCCGATGTTAAGGTGTCTGGAGGCAGGGGCAGGGGACATCAGGCTCAATG
TGGCGGTCAAGGAGGTGGTGCTGGAGGTTTTCTTGGAATTCCCTCACCCA
CCCGTACCTCCGCCTGACGCCGACATCCTTGGTTTCCTTCCACCGGCATC
ATCTTCTTCCTCAACCCCATCCCTCTCCAGCACTTCATTGCCCCACCCGG
CCCTGTACCTGGACCTTGGCCGGCTCCTCCCTCCTTCCTCCCCTCCTTCC
CTTCCTCCTTCCTACCGCCTCCTCGCACTCTTCGCCGGCGAGGACGCAGA
GCATTTGGAAGCATTGTCGGAGGACGCTGGGAAAGAAGCCGCTCTGCGGC
CTTTGCGCGCCGTCTTTGGCGACGCGGAAAGGGGGGGAGGGAAGGTGGGA
CTGCCCCCACCGAGCCGCTCGTGGAGGACACGCTGGGGGGCCGATGAATG
GGCCAAAGGCAGTTACAGCTACCTTAAGCCGGGAGGAAGGATGAAGGACA
GGCTCGAGTATGCTAAGCCTTTGTACGACTGCCTCTTCTTCGCCGGGGAG
GCCACTAATGCCGAGCATCCGGCCTGTGTGGATGGGGCTTACGTAAGCGG
AGTGCGGGCGGCGAGGGAGGTGAAACTAGCGACAGAGAAAGGATAA
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protein sequence of rna7876

>rna7876-protein ID=rna7876-protein|Name=rna7876|organism=Nannochloropsis gaditana|type=polypeptide|length=134bp
MEEREKTELHSQAWNKIAERSRREQLMMTETPSVLPPSIRQQAERADPFQ
RQRTAPKVLWSVKRNQRNRASAETGTTSEGEKTKREAKKGLGSEYSEGRR
GGEAWGREDIMCQGVSTVAMPVPMTGALGISVME
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mRNA from alignment at CM002475.1:46370..47771-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7876 ID=rna7876|Name=rna7876|organism=Nannochloropsis gaditana|type=mRNA|length=1402bp|location=Sequence derived from alignment at CM002475.1:46370..47771- (Nannochloropsis gaditana)
CCTCCCTCCCTACCAAGGAGGATTATGCTCGCAACCGGACCGAGCACAAG
CAGCTCCTTTCCCTATTCATGGAGGAGCGAGAGAAGACGGAACTTCACTC
TCAGGCCTGGAACAAGATCGCGGAACGGAGCCGACGGGAGCAGCTGATGA
TGACGGGTGCGGCCCTCCTCCCTTCCTCCCTCCCTCCTTCCCTCCCTCTC
CTCCTTCGGGAACTGGGGAGTATGGTGATGCATAAGTGAATGTTTTTATC
CTAATCTTGAGTACAGTGAGACACCCATAGTCTCGTCAAAGTCCTTACAT
GCGTCCTTCCCCTCCTTCCTTCTTCCCCCTCGGGCAGAGACACCCTCCGT
CCTCCCTCCCTCCATCCGGCAGCAGGCCGAGAGAGCCGACCCTTTCCAAC
GGCAACGAACCGCGCCAAAGGTAAAGACATGCAGGGAAGAGTTAAGGTGG
CGACGGATTTGGCGGGAAACCGAGGGAGTCGGGGGAGGAGGAGAGGAGAG
CGGTGGAGGGAGATTTGCACGGCGCTGGCGCCTTCAGGACCTTGTTCGTA
ACCTTTCCTTCCTCTTCTCCCTGTCAAGGTCCTATGGAGCGTCAAGCGGA
ACCAAAGGAACCGGGCAAGCGCCGAGACCGGCACGACTTCGGAGGGGGAG
AAGACGAAGCGCGAGGCCAAGAAAGGCTTAGGGAGTGAGTACTCAGAGGG
AAGAAGGGGGGGGGAGGCGTGGGGAAGGGAGGACATAATGTGCCAAGGGG
TTTCCACGGTGGCGATGCCCGTCCCGATGACGGGAGCGCTTGGAATTTCT
GTGATGGAATAGGTACCTGTCGGGAAGCAGCTGACAGCGATCCTCACGGG
TCATCGTGATGGCTCTCTGACATGTCGTGTCGCGGGGATAGACTTGCTGC
AATGAGTCTCATGCTGCTCTCTGACTACTGATCCTCTTCCTCTTATCCTT
ACTTTCAATTTTCAGCCTAAGCCTTCTCATCTCTCCCTTCCTTCCTCCCT
TCCCCCCTCCAGCCCGCATCGACGACCCGTCCGAGGTCGATCCCAGTTTC
GATCCGCTCGTGGTGGCCTCGTTACTCGACGAGAAGGGCATGGAGGGGGA
AGGAAGGAAGATCCTGGGTGTCTACCTCCCCAGAGTGGGTGGGAATAAAG
GGGGGAAGGCGCGGCGGCGGGAGCAGCGGATCGGGATGACGGTGGGGGAA
TATATGGCCAAAGTGACGGCGGAAGAGGAAATAGGGGGAGAATAGGCGGG
CCGGAAGGGAGGATGAAGAAGGAACATGGAAAAGAAATAACGCAGTCAAC
ACAGATTCCGTCCATGACGACCAATGGAGGGATAAAGGTAGAAGGTCAAG
AAGAGATATCAACTTTGCGTTGCATGTATTGTGATGCAGAATGCAGTAGC
GC
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Coding sequence (CDS) from alignment at CM002475.1:46370..47771-

>rna7876 ID=rna7876|Name=rna7876|organism=Nannochloropsis gaditana|type=CDS|length=1215bp|location=Sequence derived from alignment at CM002475.1:46370..47771- (Nannochloropsis gaditana)
GTCCTATGGAGCGTCAAGCGGAACCAAAGGAACCGGGCAAGCGCCGAGAC
CGGCACGACTTCGGAGGGGGAGAAGACGAAGCGCGAGGCCAAGAAAGGCT
TAGGGAGTGAGTACTCAGAGGGAAGAAGGGGGGGGGAGGCGTGGGGAAGG
GAGGACATAATGTGCCAAGGGGTTTCCACGGTGGCGATGCCCGTCCCGAT
GACGGGAGCGCTTGGAATTTCTGTGATGGAATAGAGACACCCTCCGTCCT
CCCTCCCTCCATCCGGCAGCAGGCCGAGAGAGCCGACCCTTTCCAACGGC
AACGAACCGCGCCAAAGATGGAGGAGCGAGAGAAGACGGAACTTCACTCT
CAGGCCTGGAACAAGATCGCGGAACGGAGCCGACGGGAGCAGCTGATGAT
GACGGGTCCTATGGAGCGTCAAGCGGAACCAAAGGAACCGGGCAAGCGCC
GAGACCGGCACGACTTCGGAGGGGGAGAAGACGAAGCGCGAGGCCAAGAA
AGGCTTAGGGAGTGAGTACTCAGAGGGAAGAAGGGGGGGGGAGGCGTGGG
GAAGGGAGGACATAATGTGCCAAGGGGTTTCCACGGTGGCGATGCCCGTC
CCGATGACGGGAGCGCTTGGAATTTCTGTGATGGAATAGAGACACCCTCC
GTCCTCCCTCCCTCCATCCGGCAGCAGGCCGAGAGAGCCGACCCTTTCCA
ACGGCAACGAACCGCGCCAAAGATGGAGGAGCGAGAGAAGACGGAACTTC
ACTCTCAGGCCTGGAACAAGATCGCGGAACGGAGCCGACGGGAGCAGCTG
ATGATGACGGGTCCTATGGAGCGTCAAGCGGAACCAAAGGAACCGGGCAA
GCGCCGAGACCGGCACGACTTCGGAGGGGGAGAAGACGAAGCGCGAGGCC
AAGAAAGGCTTAGGGAGTGAGTACTCAGAGGGAAGAAGGGGGGGGGAGGC
GTGGGGAAGGGAGGACATAATGTGCCAAGGGGTTTCCACGGTGGCGATGC
CCGTCCCGATGACGGGAGCGCTTGGAATTTCTGTGATGGAATAGAGACAC
CCTCCGTCCTCCCTCCCTCCATCCGGCAGCAGGCCGAGAGAGCCGACCCT
TTCCAACGGCAACGAACCGCGCCAAAGATGGAGGAGCGAGAGAAGACGGA
ACTTCACTCTCAGGCCTGGAACAAGATCGCGGAACGGAGCCGACGGGAGC
AGCTGATGATGACGG
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Synonyms
Publications