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Properties
| Property Name | Value |
|---|
| Product | methyltransferase family |
| Orig transcript id | gnl|cribi|Naga_100035g48.3352.mrna |
| Orig protein id | gnl|cribi|Naga_100035g48.3352 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:416639..418917 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna786 ID=rna786|Name=rna786|organism=Nannochloropsis gaditana|type=mRNA|length=3111bp
CATGAGAGCGAAGTGAGGATTATTTGGTCCATAGAAATTGGAACTCGAGT
TTTATAATCATTGTTACCGCTTTCACTCTCCTAACAAGTGCGTCTGCTAC
TCTCCTATTCTCCCACATTCAAGGCACTTCGTACTCGAAGGACCATAAAA
GCTAGGGGAAATGGAGGTTCTGCCTCCTTTTTCTGCGTAAGGGCGCTTCC
TGTGCCTCCTATTCGACAAAAGTCAGCCCGAAGGCGCTGTAAGGCCAGCG
AACAGCATGAGAAATCTTTGGGGAAGGAACCGCCTGTTGATTGCGCTTTA
TGTGCCCTTTGTTGCTCTGGTGCTTTTCCATATTATGAGTCTGAAACATG
CACCTCTTTTAGGCAAGGCCCTGTTTACCGGCACGAGGCCGCCTCTCAAC
AACAAAGTACTCGCGACGAGGGCGAAGGCGGAGATAAAGGGAGCACACGG
GGGACATGTCTTTGTGGCTGCCAAGAGAAGGACCTACCATGGTTCTCGTC
CTTTCAGCAGCAATATTTCAACCTCAGGCGTTTCACATAAGCCATATCCT
CGCAGTGCAGAGCAGCTTACATGCAATAAATGGGCCGTAGTGACGACCAT
TTTTGGACCTACTGCACTTGTGAAGCAACTTGTAGAAATGAAGGATTGGT
GTGTGGTGGTTGTCGGAGATCAACAGTCCCCTTCCACTTATGATATCCAA
AGCGACAACCTTATATTCTTGGGTCCGGAGGAGCAAGAAGCATTGCCGTA
TCACATCATCCCTCTCCTAAAATGGAACCACTTTGGTCGTAAAAACATTG
GCTTTCTCTACGCCATGCAACACGGCGCCGAAGTGATCTACGACACAGAC
GACGACAACATTCTCAAAGTTGATAGCAGAGGCAAGCCTTTCATACCTGA
TTGCAAATTGGGCGAGCTTGCCCTGTCGAAGGATGTTGTCCGTTCGGGAC
AGTCGCAAGTATATAATCCCTACCCGAACTTTGGAAGCGTGCGCGTGAAG
GATGGGAGCCCTGCTTTCGTGTGGCCGCGTGGTTTTCCTGTGGATCTCAT
CACTGATGCAAGCACCTGGAACGTCAGTCTTGGCGTGGAGGAAGAGACCC
TCGAAGGAGGAGTAATCACCATCGTCCAGAGCCTGGCCGACCACGACCCT
GATGTTGACGCCCTATACCGTCTGACGAGTCACCTCCCCTTGCGTTTCCA
CTCGGGTGGGAGTGCCAGATTGGAGGTCATTCCTCCGGGAGTCATGACCC
CATTCAACGCCCAGGCGACGGTCTTCGGCAAGGCCGGCTTCTGGGGTATG
CTCCTTCCCATCACCGTGAATGGGAGAGTGTCGGATATATGGCGCTCGTA
CGTGACGTCAAGGATCATGTGGGAAGCAGGGCAACGCTTGGCGTTTGCTT
CACCGTTTGTGACACAGTGCCGCAACTCCCATAGCTACGTGGCTGACTTC
GACGCCGAAAACGATCTTTACGAACGGGCGGGCGCTCTCGTCTCGTGGCT
ACTTGAATGGCGCCCTGTCTCCCATTCCCTGGAAGGGATGATAGAGGAAA
TGGCGATAGCTATGTACGAAATGGATTTTTTGCACGACCCCCTGGACGTG
GACCTGGCAATCGCCTGGATCCAGGACCTTCAGGGTATAGGAGTCGCAAT
GCCCAAGATGCTGTCTCAGTCCGAGAAAGGATATTTTAGTCCCCATGCAA
ATGGAACTGTCGGGTCCTTGAAGATTGTCAGGAGCGATGGGACCTGTGAG
CAAAGCAGCGTAGCTGAACCATCTCTATGGGCAGTCCTCCCACCGTCAAC
CCCCAAATCAAGGAAACCCGTCGCCCTCATGGTCATGACAAAAGATGACA
TGAACCTCCTCTCGCGCTTCCTTGCCTACCACGGCGATGTCTTTGGCTTC
GAGAACATCTATGTCTTCGACGGCAGCACCGGCCCACAAAAGGCGTTCCT
CGACTCCATTGCAGCGCTGTATCCTATCCACGTCAGGCATAGCCTGGTGG
ACCTCAATGAAATCACCAACGAGCTAGCGCAATGGATCGACGAGATCAAA
GGAGGTTACGAATGGATTTTCAAAGTTGACACGGACGAGTTCCTTGTTCA
AAAAGGCGACGGACATGGCGGGCCCGTATTGTCCAATCCAGCCCTTCTGC
TCCCGACGTCCAATGCATCGGACGCCACCCTAAGTGTGGATCATTTGTAT
GAAGCCGCTCCCGTGACAAGCGGTTCACCGACAGAGGCCGAGCATTCCAT
GAGCAGGGCGGCACCAAGATGGAAGCAGTTCTACAACGGTGAAAAGTTCA
ACATAACAGACCTGAATATTGGCAGCCACGTGCGCGGAGAAACAACAGTC
GCGCGTGGTATCGCCTTCGTGCACTACCGCAGTCGAAGCTACGAGGATTA
TGTACAAATTGCTACTCAGACGCTTTTGGGGCATGACTACGTGAAGGCGA
CGGACAGCAAGGAGGAGATGATCGACAAGCTCAAGAAACTGGACGATCGG
CCCTCGTGCCTTCGACCCTCTTGTCATAAGATCCCGATTGTGCTCGATGC
CCTCATGAAGTATGAGGAGACGCAACAAAAATTTTATGAAAAATCCAAGG
CATGGCCGAGAAATCTGAGAGTGTTTCGGGAACACCTGGGTAAGATATTT
GCAAAATACCCATCAATAGTAATCAACTAATTACTAGCTCGAGGCAAGAA
AGGTGTCTCTACCTTTTATTTAAAAATACGGAGGGTGGGATGGTGGTCAT
GTCCTCACGAAAAACGAGTGAAAGCACCGAGAGTTCCACGATTTTCCGAA
AGCACCTTGTTAGAAGATAAATGTAAGGCACCGCTATGGAATTTGTGCTC
TTGTTCACCTGCTGGCGTCGTGTATTCCTGTAATTGGCTGTGCAATAAAT
TGATCGAGCTCGGCCGTCCAACTTCGAATTCGATTTCGTGGACATCCTTC
AACTCTCGACTTGATCGGCAAGTTCGACTGTTTTTAAATCGGGGATCGAC
GAGTTGCTGAGGTTCGGTTTTGGCGTCAGGGGTGGGGGGGGAAAGATAAT
AAAGTCAAAGCACCGTTTCTTGCTCGCAATAAAAAGAAGATAACTGCACA
CAAAATCGAAG back to topprotein sequence of rna786 >rna786-protein ID=rna786-protein|Name=rna786|organism=Nannochloropsis gaditana|type=polypeptide|length=427bp
MCAHGHTLHQLMSLKFLYHRIQLIQTHVHMHSKPIHPKRTTPRPLQSQDG
MGLSSLSSSLARTQGAVGERSKSAIDEKLHRRLCRLPRSAQQQRCMVIAL
VCMCIVIAMAALQPIFGSLHSLLAAHPASLASRPPTRERHAQRGLSLPER
LSAAYLDYMDETQAMQDQAEADETWIMPEECKQMTMEVDSRKTFYSELGQ
DLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCV
EANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSGYMGHVVDTDDNATN
GVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDA
HDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMKFMEHA
RVDARPHYYQMMKDTQRQRGRPIIAPW back to topmRNA from alignment at CM002456.1:416639..418917+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna786 ID=rna786|Name=rna786|organism=Nannochloropsis gaditana|type=mRNA|length=2279bp|location=Sequence derived from alignment at CM002456.1:416639..418917+ (Nannochloropsis gaditana)
CACCTGTCTGCAGACATTGACGAGTCGTGTAGGCGTGAGCGATGTGCGCC
CATGGGCACACCCTTCATCAATTAATGTCTCTGAAATTCCTTTATCATAG
AATACAATTGATACAAACTCACGTGCACATGCACTCAAAACCCATTCACC
CTAAGAGGACTACGCCACGGCCCTTACAGTCACAAGACGGGATGGGTTTG
agctccctctccagctCCTTAGCGCGCACCcagggggcggtgggagagcg
TAGTAAGTCAGCCATCGACGAGAAATTGCATCGCCGCCTGTGTAGGCTGC
CTCGATCGGCACAACAGCAACGGTGTATGGTGATTGCCTTGGTGTGCATG
TGCATTGTCATTGCGATGGCTGCCCTGCAACCCATCTTCGGGTCGCTgca
ctccctccttgccgcccaCCCAGCTAGCCTGGCCAGTCGCCCTCCAACAA
GGGAAAGGCATGCCCAGAGaggcctttccctgcccgAGAGGCTCTCCGCG
GCGTACCTGGACTACATGGACGAAACACAAGCAATGCAGGACCAAGCAGA
GGCAGACGAGACCTGGATCATGCCAGAGGAGTGCAAGCAGATGACCATGG
AAGTAGATTCCAGGAAGACTTTTTACAGCGAGCTGGGCCAGGACCTCTTT
CTGTACAAGCATTTTTTCCGGGACGGCCAGACCAGCGACGGCAGGAAGCG
CTTTTTCCTGGACATTGGTAAGATCATGCGTGGGACCAcagaagggggcg
gggatcTATGGGAAAGTAGACATGTTCAAGTGACACAAATAAGCTCAACT
ACAGGATCCCCCGGCTCTTTTTTCTAACATTCGAATAGGCGCAAATAGCC
CGCAGTCCAATTCCAACACCTTTTTCTTTGAGAAGTGCCTGGGATGGGAG
GGCCTGTGCGTCGAGGCTAACCCCGACCTCGCGAAAGCGTTCGAGGGCCA
GCGTCAGTGTAAGGTCGAGAATGTCTGCATCTCCAACAAGGCGTCCACGC
TCAAGTTCCTCAAGTCTGGCTAGTGAGTCGACAGCGCGCAAAACTCGTTT
CATTCAAAGTTTCCCCTAGATTCGTACGATACGCCGCCATGCTCATCCAC
TTCTAACCCCGTCATCTCTCTGTTCTTTCTTATTTTCGAACAGTATGGGC
CACGTAGTTGACACGGACGACAATGCAACGAACGGTGTACAGGGCACCGA
CATGGTGGAGATTCCTTGCATCACCATCACAGAGCTACTGGCAAAGCACA
ACATCACTCATGTTGACTTTCTATCTATAGACATCGAGGCCGGAGAACAt
gccgccctttcccctctacTTCAGCCGGACGCCCACGACATCAAGATCGA
TGTCATGGCTGCCGAGGTATTCTGGTCCGATGCCCAGCTTCGATGGCTGC
TCTCCGACCTCGGGTTCTGGAAGGTCACAGACATTGCTCACGTGGACGAC
ATATTCGTGCGTATGAAGTTCATGGAGCATGCAAGGGTGGACGCCCGTCC
GCACTATTATCAAATGATGAAGGATACGCAGCGACAACGGGGCCGTCCTA
TCATCGCTCCCTGGTGATTCGTGCCCACTGCGACCACGTGATGATTGATT
GAGAAGTGGAGTTCTGCCATGATGGGCACTGCTCAGATGATACGACATAG
CATAGGGCTCGAATATGGAGAACCCCGCGCCCccacttccttttccttgc
cgtGCATGCTGGAGTAATCTGTTGATCTGCAGGCTGATCGTGCGCAGTGG
TGAATAAACAAAAAAGCAACATGTCGACATTGGTCAGAGGACATCGCACA
ACCCACACACAAATTGATTGTTTGAAGAATGGATGTCCTGTGAGCATTGC
CGCATGAATGTCCAGCGACAAATTGTTACAATTGTTGAATTGTTGAAACC
GTGCAAGCACTTTGCACGCGTGCAGCACGTCGCACGTGACCACCCCTGCT
TCTCATCATCATTATGCGGTCCTTTTTCCACCATACGCCCCCCTTATCAT
TAGCGTCATCATGGGGTCTTATGCCCTGGTTCGAAAAGCTTCAAGGCTCG
CCCAAAGAGCAGGAATTCGTATAAGTCACTCGAATATATCCTTTCACACA
ACCATCCGGATACGCAGGCAGTCGTCAACCATGTCGGCCAGACCACGCAA
TAGCCCAAGCCTCAAGGGCAGCGCTGCCTGCACGCCGACGCCGTGGGCTc
caagtggaggagaggtagAGACGAGGATGCACGAGGCGTAGAAGATGTCA
AAGAGCATCGGAAGCACCGTTGCCCGTGC back to topCoding sequence (CDS) from alignment at CM002456.1:416639..418917+ >rna786 ID=rna786|Name=rna786|organism=Nannochloropsis gaditana|type=CDS|length=3852bp|location=Sequence derived from alignment at CM002456.1:416639..418917+ (Nannochloropsis gaditana)
ATGTGCGCCCATGGGCACACCCTTCATCAATTAATGTCTCTGAAATTCCT
TTATCATAGAATACAATTGATACAAACTCACGTGCACATGCACTCAAAAC
CCATTCACCCTAAGAGGACTACGCCACGGCCCTTACAGTCACAAGACGGG
ATGGGTTTGagctccctctccagctCCTTAGCGCGCACCcagggggcggt
gggagagcgTAGTAAGTCAGCCATCGACGAGAAATTGCATCGCCGCCTGT
GTAGGCTGCCTCGATCGGCACAACAGCAACGGTGTATGGTGATTGCCTTG
GTGTGCATGTGCATTGTCATTGCGATGGCTGCCCTGCAACCCATCTTCGG
GTCGCTgcactccctccttgccgcccaCCCAGCTAGCCTGGCCAGTCGCC
CTCCAACAAGGGAAAGGCATGCCCAGAGaggcctttccctgcccgAGAGG
CTCTCCGCGGCGTACCTGGACTACATGGACGAAACACAAGCAATGCAGGA
CCAAGCAGAGGCAGACGAGACCTGGATCATGCCAGAGGAGTGCAAGCAGA
TGACCATGGAAGTAGATTCCAGGAAGACTTTTTACAGCGAGCTGGGCCAG
GACCTCTTTCTGTACAAGCATTTTTTCCGGGACGGCCAGACCAGCGACGG
CAGGAAGCGCTTTTTCCTGGACATTGGCGCAAATAGCCCGCAGTCCAATT
CCAACACCTTTTTCTTTGAGAAGTGCCTGGGATGGGAGGGCCTGTGCGTC
GAGGCTAACCCCGACCTCGCGAAAGCGTTCGAGGGCCAGCGTCAGTGTAA
GGTCGAGAATGTCTGCATCTCCAACAAGGCGTCCACGCTCAAGTTCCTCA
AGTCTGGCTATATGGGCCACGTAGTTGACACGGACGACAATGCAACGAAC
GGTGTACAGGGCACCGACATGGTGGAGATTCCTTGCATCACCATCACAGA
GCTACTGGCAAAGCACAACATCACTCATGTTGACTTTCTATCTATAGACA
TCGAGGCCGGAGAACAtgccgccctttcccctctacTTCAGCCGGACGCC
CACGACATCAAGATCGATGTCATGGCTGCCGAGGTATTCTGGTCCGATGC
CCAGCTTCGATGGCTGCTCTCCGACCTCGGGTTCTGGAAGGTCACAGACA
TTGCTCACGTGGACGACATATTCGTGCGTATGAAGTTCATGGAGCATGCA
AGGGTGGACGCCCGTCCGCACTATTATCAAATGATGAAGGATACGCAGCG
ACAACGGGGCCGTCCTATCATCGCTCCCTGGTGAATGTGCGCCCATGGGC
ACACCCTTCATCAATTAATGTCTCTGAAATTCCTTTATCATAGAATACAA
TTGATACAAACTCACGTGCACATGCACTCAAAACCCATTCACCCTAAGAG
GACTACGCCACGGCCCTTACAGTCACAAGACGGGATGGGTTTGagctccc
tctccagctCCTTAGCGCGCACCcagggggcggtgggagagcgTAGTAAG
TCAGCCATCGACGAGAAATTGCATCGCCGCCTGTGTAGGCTGCCTCGATC
GGCACAACAGCAACGGTGTATGGTGATTGCCTTGGTGTGCATGTGCATTG
TCATTGCGATGGCTGCCCTGCAACCCATCTTCGGGTCGCTgcactccctc
cttgccgcccaCCCAGCTAGCCTGGCCAGTCGCCCTCCAACAAGGGAAAG
GCATGCCCAGAGaggcctttccctgcccgAGAGGCTCTCCGCGGCGTACC
TGGACTACATGGACGAAACACAAGCAATGCAGGACCAAGCAGAGGCAGAC
GAGACCTGGATCATGCCAGAGGAGTGCAAGCAGATGACCATGGAAGTAGA
TTCCAGGAAGACTTTTTACAGCGAGCTGGGCCAGGACCTCTTTCTGTACA
AGCATTTTTTCCGGGACGGCCAGACCAGCGACGGCAGGAAGCGCTTTTTC
CTGGACATTGGCGCAAATAGCCCGCAGTCCAATTCCAACACCTTTTTCTT
TGAGAAGTGCCTGGGATGGGAGGGCCTGTGCGTCGAGGCTAACCCCGACC
TCGCGAAAGCGTTCGAGGGCCAGCGTCAGTGTAAGGTCGAGAATGTCTGC
ATCTCCAACAAGGCGTCCACGCTCAAGTTCCTCAAGTCTGGCTATATGGG
CCACGTAGTTGACACGGACGACAATGCAACGAACGGTGTACAGGGCACCG
ACATGGTGGAGATTCCTTGCATCACCATCACAGAGCTACTGGCAAAGCAC
AACATCACTCATGTTGACTTTCTATCTATAGACATCGAGGCCGGAGAACA
tgccgccctttcccctctacTTCAGCCGGACGCCCACGACATCAAGATCG
ATGTCATGGCTGCCGAGGTATTCTGGTCCGATGCCCAGCTTCGATGGCTG
CTCTCCGACCTCGGGTTCTGGAAGGTCACAGACATTGCTCACGTGGACGA
CATATTCGTGCGTATGAAGTTCATGGAGCATGCAAGGGTGGACGCCCGTC
CGCACTATTATCAAATGATGAAGGATACGCAGCGACAACGGGGCCGTCCT
ATCATCGCTCCCTGGTGAATGTGCGCCCATGGGCACACCCTTCATCAATT
AATGTCTCTGAAATTCCTTTATCATAGAATACAATTGATACAAACTCACG
TGCACATGCACTCAAAACCCATTCACCCTAAGAGGACTACGCCACGGCCC
TTACAGTCACAAGACGGGATGGGTTTGagctccctctccagctCCTTAGC
GCGCACCcagggggcggtgggagagcgTAGTAAGTCAGCCATCGACGAGA
AATTGCATCGCCGCCTGTGTAGGCTGCCTCGATCGGCACAACAGCAACGG
TGTATGGTGATTGCCTTGGTGTGCATGTGCATTGTCATTGCGATGGCTGC
CCTGCAACCCATCTTCGGGTCGCTgcactccctccttgccgcccaCCCAG
CTAGCCTGGCCAGTCGCCCTCCAACAAGGGAAAGGCATGCCCAGAGaggc
ctttccctgcccgAGAGGCTCTCCGCGGCGTACCTGGACTACATGGACGA
AACACAAGCAATGCAGGACCAAGCAGAGGCAGACGAGACCTGGATCATGC
CAGAGGAGTGCAAGCAGATGACCATGGAAGTAGATTCCAGGAAGACTTTT
TACAGCGAGCTGGGCCAGGACCTCTTTCTGTACAAGCATTTTTTCCGGGA
CGGCCAGACCAGCGACGGCAGGAAGCGCTTTTTCCTGGACATTGGCGCAA
ATAGCCCGCAGTCCAATTCCAACACCTTTTTCTTTGAGAAGTGCCTGGGA
TGGGAGGGCCTGTGCGTCGAGGCTAACCCCGACCTCGCGAAAGCGTTCGA
GGGCCAGCGTCAGTGTAAGGTCGAGAATGTCTGCATCTCCAACAAGGCGT
CCACGCTCAAGTTCCTCAAGTCTGGCTATATGGGCCACGTAGTTGACACG
GACGACAATGCAACGAACGGTGTACAGGGCACCGACATGGTGGAGATTCC
TTGCATCACCATCACAGAGCTACTGGCAAAGCACAACATCACTCATGTTG
ACTTTCTATCTATAGACATCGAGGCCGGAGAACAtgccgccctttcccct
ctacTTCAGCCGGACGCCCACGACATCAAGATCGATGTCATGGCTGCCGA
GGTATTCTGGTCCGATGCCCAGCTTCGATGGCTGCTCTCCGACCTCGGGT
TCTGGAAGGTCACAGACATTGCTCACGTGGACGACATATTCGTGCGTATG
AAGTTCATGGAGCATGCAAGGGTGGACGCCCGTCCGCACTATTATCAAAT
GATGAAGGATACGCAGCGACAACGGGGCCGTCCTATCATCGCTCCCTGGT
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