EWM29888.1, cds786 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|585112471|gb|EWM29888.1| (methyltransferase family [Nannochloropsis gaditana]) HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0 Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0
Query: 1 MCAHGHTLHQLMSLKFLYHRIQLIQTHVHMHSKPIHPKRTTPRPLQSQDGMGLSSLSSSLARTQGAVGERSKSAIDEKLHRRLCRLPRSAQQQRCMVIALVCMCIVIAMAALQPIFGSLHSLLAAHPASLASRPPTRERHAQRGLSLPERLSAAYLDYMDETQAMQDQAEADETWIMPEECKQMTMEVDSRKTFYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSGYMGHVVDTDDNATNGVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMKFMEHARVDARPHYYQMMKDTQRQRGRPIIAPW 427
MCAHGHTLHQLMSLKFLYHRIQLIQTHVHMHSKPIHPKRTTPRPLQSQDGMGLSSLSSSLARTQGAVGERSKSAIDEKLHRRLCRLPRSAQQQRCMVIALVCMCIVIAMAALQPIFGSLHSLLAAHPASLASRPPTRERHAQRGLSLPERLSAAYLDYMDETQAMQDQAEADETWIMPEECKQMTMEVDSRKTFYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSGYMGHVVDTDDNATNGVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMKFMEHARVDARPHYYQMMKDTQRQRGRPIIAPW
Sbjct: 1 MCAHGHTLHQLMSLKFLYHRIQLIQTHVHMHSKPIHPKRTTPRPLQSQDGMGLSSLSSSLARTQGAVGERSKSAIDEKLHRRLCRLPRSAQQQRCMVIALVCMCIVIAMAALQPIFGSLHSLLAAHPASLASRPPTRERHAQRGLSLPERLSAAYLDYMDETQAMQDQAEADETWIMPEECKQMTMEVDSRKTFYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSGYMGHVVDTDDNATNGVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMKFMEHARVDARPHYYQMMKDTQRQRGRPIIAPW 427
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|496485956|ref|WP_009194526.1| (methyltransferase FkbM family [Cesiribacter andamanensis] >gi|470230050|gb|EMR03692.1| methyltransferase, FkbM family [Cesiribacter andamanensis AMV16]) HSP 1 Score: 130.568 bits (327), Expect = 4.928e-32 Identity = 79/219 (36.07%), Postives = 121/219 (55.25%), Query Frame = 0
Query: 190 SRKTFYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLK-SGY---MGHVVDTDDNA-----TNGVQ----GTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMK 395
++ FYS+ GQD ++Y+ FF+ GQ S FF++IGAN + SNT+FFEK GW GLC+E +P E R C N+C+SNK +FLK GY + + + D+A N +Q D++EIPC + ++L ++NI+ VDF SID E GE L + D H I+V E + L+ +++ G+ +V + D+I+VR +
Sbjct: 2 TKHKFYSQYGQDQYIYQKFFK-GQESG----FFIEIGANDGITYSNTYFFEKECGWNGLCIEPHPSAYAKLEQNRNCLTMNICVSNKVGINEFLKIEGYAEMLSGLNEKYDDAHIERINNSIQIHGGKKDIIEIPCKRLDQILDENNISKVDFCSIDTEGGE---LEIIESADLHYRDINVFTIENNYFGDDLKKMMAKYGYKQVNKLV-CDEIYVRKR 211
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|1189389424|gb|OSX76411.1| (hypothetical protein BU14_0192s0027 [Porphyra umbilicalis]) HSP 1 Score: 118.242 bits (295), Expect = 1.829e-26 Identity = 73/223 (32.74%), Postives = 107/223 (47.98%), Query Frame = 0
Query: 165 MQDQAEADETWIMPEECKQMTME---VDSRKTFYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSGYMGHVVDTDDNATN------GVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGF 378
M+D AD ECK T + F+S+ GQD +LY FR R F+D+ N P SNT+F E CLGW GLCVE N + R C++ +C++ +A T++F+++G + + DT+ N GV I C ++ +L + IT VDF+S+DIE E AL + D + I V+A E +D R L G+
Sbjct: 82 MRDPRPADA------ECKPRTPDNCPAGVAPRFFSQYGQDHWLYTQHFRH----LARPGVFVDLATNHPVYISNTYFLESCLGWSGLCVEPNSAYHERIVAWRSCELTPLCVAREAKTVEFIEAGGLSGIADTNKNVGGRGAWQAGVATAPRRNITCAPLSAMLHRRGITEVDFMSLDIEGAEPEALQSI---DWGAVTIKVIALEDEAADHGPRRFLEARGY 291
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|406987348|gb|EKE07726.1| (methyltransferase fkbm family [uncultured bacterium] >gi|1084492959|gb|OGN56356.1| hypothetical protein A2796_02925 [Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39] >gi|1084494411|gb|OGN57702.1| hypothetical protein A3C42_06815 [Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_45_9] >gi|1084497212|gb|OGN60252.1| hypothetical protein A3D96_05415 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_44_59] >gi|1084504727|gb|OGN67095.1| hypothetical protein A2978_00630 [Chlamydiae bacterium RIFCSPLOWO2_01_FULL_44_52] >gi|1084505341|gb|OGN67685.1| hypothetical protein A3I67_04565 [Chlamydiae bacterium RIFCSPLOWO2_02_FULL_45_22] >gi|1084509165|gb|OGN71388.1| hypothetical protein A3F79_03230 [Chlamydiae bacterium RIFCSPLOWO2_12_FULL_45_20]) HSP 1 Score: 110.923 bits (276), Expect = 1.581e-24 Identity = 71/216 (32.87%), Postives = 114/216 (52.78%), Query Frame = 0
Query: 194 FYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLK-SGYMGHVVDTDDNAT-------------NGVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMK 395
FYS+ QD ++Y+ FF++ Q F+DIGA+ + SNT+FFEK +GW G+CVE P++ + R C CI + ++ FLK SG+ + +N NG Q ++++ + C +T+LL H++ H+D+LSID E GE L + D I IDV+ E + D + L LG+ K+ ++ DDI+ ++K
Sbjct: 28 FYSQYQQDQYVYEKFFKNKQNG-----VFVDIGAHDGITLSNTYFFEKSMGWTGICVEPIPEVYNRLKKNRSCVCVQGCIFDNRDSVPFLKISGWAEMLSGIMENYDPQHLKRIQWEIDLNGGQ-SEIINVKCYDLTDLLIDHHMHHIDYLSIDTEGGELGILQSI---DFSRIDIDVIEVENNYHDP-FQAFLEPLGYRKICELG-PDDIYQKIK 232
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|1084502646|gb|OGN65170.1| (hypothetical protein A3E80_01265 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9]) HSP 1 Score: 109.383 bits (272), Expect = 9.074e-24 Identity = 68/213 (31.92%), Postives = 114/213 (53.52%), Query Frame = 0
Query: 193 TFYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLK-SGY---MGHVVDTDDNATNG----------VQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIF 391
TFYS+ GQD ++Y+ FF++ K F+DIGA+ + SNT FFE+ LGWEG+C+E P++ + + R CIS+KA T +FL+ GY + ++D D G D++ + C + ++L K+ HVD+LS+D E GE L + D I+++ E ++++++R+ L+ G ++ A DD+F
Sbjct: 21 TFYSQCGQDQYIYESFFKEKP-----KGIFIDIGAHDGITFSNTKFFEE-LGWEGICIEPIPEVFEELKKNRSSICVKGCISDKAGTGRFLRIKGYPEMLSGLLDYYDPTHLGRALTEIYSAPTNSCDVIAVECFLLNDILEKNGYFHVDYLSLDTEGGEFEILQSI---DFEKFDIEIIEVENNFNESKIRYFLASKG-YEFMGQAGWDDVF 223
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|818312347|gb|KKP96105.1| (Methyltransferase FkbM family [candidate division TM6 bacterium GW2011_GWF2_36_131] >gi|818320312|gb|KKQ03701.1| Methyltransferase FkbM family [candidate division TM6 bacterium GW2011_GWE2_36_25] >gi|818337904|gb|KKQ20063.1| Methyltransferase FkbM family [candidate division TM6 bacterium GW2011_GWA2_36_9]) HSP 1 Score: 107.071 bits (266), Expect = 3.778e-23 Identity = 68/216 (31.48%), Postives = 109/216 (50.46%), Query Frame = 0
Query: 194 FYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSG----YMGHVVDTDDNA----------TNGVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMK 395
+YS+ GQD ++++ FR + R FF DIGA+ S SNT+FFEK + W G+CVE +P++ K + R C CI +K F K + + DT D+A T G ++V + C + A++ I H+DFLS+D E E + + + D + I IDV+A E +D ++ L+ G+ ++ DDI+ + K
Sbjct: 31 YYSQCGQDKYVHEVLFRKNK----RYGFFFDIGAHDGMSYSNTYFFEKEMEWAGICVEPHPEIFKELKKNRCCICMQGCIFDKEGEFDFAKVNGCPEMLSGLTDTFDDAHQKRVVDEIKTRG-GSQEIVRVKCFKFNNICAQYGIKHIDFLSVDTEGSEESIIKSI---DFNKIDIDVIAVENNNNDKKIMQHLNQKGYKRIASKGG-DDIYRKKK 237
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|303291364|ref|XP_003064968.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|303291366|ref|XP_003064969.1| predicted protein [Micromonas pusilla CCMP1545] >gi|226453639|gb|EEH50948.1| predicted protein [Micromonas pusilla CCMP1545] >gi|226453640|gb|EEH50949.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 108.227 bits (269), Expect = 8.966e-23 Identity = 72/240 (30.00%), Postives = 114/240 (47.50%), Query Frame = 0
Query: 183 QMTMEVDSRKTFYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSGYMGHVVDTDDNATNGVQGTDMVEIPCITITELLAKH--NITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFW-SDAQLRWLLSDLGFWKVTDIAHVDDIFVRMKFMEHARVDARPHYYQMMKDTQRQR 419
Q T+ T S+ QD+++ ++ F Q K F++D GAN Q SNT FF+ CLGWEGLC E N + + R C + CI++ TL F+ +G G + D ++ VQ C + ++L K+ THVDF S+D+E E L + I + + E FW SD + +++ GF KV +A +D +++ + AR P++ + R R
Sbjct: 93 QQTLGSTKYYTMGSQFEQDIYMIRNIFY-SQVLSAEKGFYVDSGANHAQQLSNTLFFDVCLGWEGLCAEPNEEYHLSLRTNRTCVLAPECIADGEKTLPFVFAGAGGRIASNDSLTSSSVQ--------CRRLDQMLDKYARGRTHVDFFSLDVEGSEMTILKAV---PWDKISFNAILIETFWLSDRIVDRFMTERGFAKVQQLA-IDSLYLTWSQRDEARPWLPPNWEHFWELNTRYR 319
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|922856362|gb|KOO24725.1| (methyltransferase family, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 106.301 bits (264), Expect = 4.612e-22 Identity = 71/256 (27.73%), Postives = 120/256 (46.88%), Query Frame = 0
Query: 179 EECKQMTMEVDSRKTFYSELGQDLFLYKHFFRDGQTSDGRKR--FFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKS----GYMGHVVDTDDNATNGVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLL--QPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRMKFMEHARVDARPHYYQMMKDTQRQRGRPIIAP 426
E+ +MT F S+ GQD +++++ + RK FF+D+ +N SNT+F E+CLGW GLC+E NP + +R+C + C+S+ A T++ + G VV + + V++ C T+ +L +H + H+DF+S+DIE E A+S L H + IDV++AE S +W+ + H + F+ RP Y +++ G+PI+ P
Sbjct: 62 EKTLRMTGYDRDVPNFVSQWGQDWWIWQNH------AQYRKEPGFFVDLASNDAMWASNTYFLEQCLGWRGLCIEPNPVHHERIRAERKCTLVPSCVSDAAKTIEMILPDSFHGGAARVVKQQSD-LRLARNKKPVQMECRTLRSILHEHKVKHIDFMSLDIEGHEPEAMSTLKLDHGGEHGVTIDVVSAETN----------SSAAYWRAGNYRHYSPKGMEQVFL-------RPGYQMPIEEA----GKPILWP 289
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|818249255|gb|KKP36088.1| (hypothetical protein UR26_C0001G0132 [candidate division TM6 bacterium GW2011_GWF2_32_72]) HSP 1 Score: 103.99 bits (258), Expect = 2.343e-20 Identity = 69/212 (32.55%), Postives = 113/212 (53.30%), Query Frame = 0
Query: 196 SELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLK-SGY---MGHVVDTDDN---------ATNGVQGTDMVEIPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAEVFWSDAQLRWLLSDLGFWKVTDIAHVDDIFVRM 394
S+ GQD F+Y+ FF++ SDG F+DIGA ++ SNTFFFEK LGW+G+C E + +R C N CI++ +FL+ GY + +V + D+ N + ++ C + +LL ++N VD+LS+DIE GE L + + D+ IDV+ E + D++++ L G+ V+ IA D+I+ ++
Sbjct: 382 SQYGQDRFVYETFFKN--KSDG---VFVDIGATDGETISNTFFFEKSLGWKGICAEPRGSVFNKLSDKRNCVCFNGCITDFNGETEFLEIDGYSQDLSGIVKSYDSRHLQRIETELENYGGASKKIKTKCRRLNDLLKENNFARVDYLSLDIEGGELDVLKGI---NFDDVFIDVIDVENNYKDSRIKDYLMGQGYELVSRIA-CDEIYRKI 584
BLAST of EWM29888.1 vs. NCBI_GenBank
Match: gi|1189385845|gb|OSX72991.1| (hypothetical protein BU14_0389s0015 [Porphyra umbilicalis]) HSP 1 Score: 100.908 bits (250), Expect = 4.999e-20 Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 0
Query: 194 FYSELGQDLFLYKHFFRDGQTSDGRKRFFLDIGANSPQSNSNTFFFEKCLGWEGLCVEANPDLAKAFEGQRQCKVENVCISNKASTLKFLKSGYMGHVVDTDDNATNGVQGTDMVE------IPCITITELLAKHNITHVDFLSIDIEAGEHAALSPLLQPDAHDIKIDVMAAE 361
F + GQD +L+ + F+ + R F D+ AN SNT+ FE CLGW+G+CVE N +A R C + +C+S+ T+ F+ + + DT+ N + V + C T +L + +THVDFLS+D+E E L + D ++IDV+A E
Sbjct: 136 FTGQFGQDAWLWSNHFKALR----RPGVFFDVAANEAVDISNTYVFETCLGWKGICVEPNTRYLRALHDLRTCDLVPLCLSDVPKTVSFIDYLGLSGIADTNKNVNGSAEWQRRVRTAPRRTLECTTGGAVLRRAALTHVDFLSLDVEGAELEVLRGI---DWDAVRIDVIALE 302 The following BLAST results are available for this feature:
BLAST of EWM29888.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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