rna7844, rna7844 (mRNA) Nannochloropsis gaditana

Overview
Namerna7844
Unique Namerna7844
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1024
Alignment locationCM002474.1:109162..110166 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101043g2.5896.mrna
Orig protein idgnl|cribi|Naga_101043g2.5896
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:109162..110166 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101043g2gene7598Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7844rna7844-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22851.1cds7823Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7844 ID=rna7844|Name=rna7844|organism=Nannochloropsis gaditana|type=mRNA|length=1024bp
GGGTCCTCAGCTCGTGGCCTGATGAGCCCCTTTGGAAACCAAACGCACCC
GTCTATAAGTGATTGGGGACTTCCAAACGCATCGAAGGGGCAGTGGGATG
GAAAAGAGGGCTTGTCTTTGCCGCCAGAGGCTCCAGTCACGGAGATAATT
CAGCGGTATCTGGATTTGTGCCTGTTTCCCACCGCCACCTTCCTGGCTGA
GCGCCTGTGCGCCCAACAACCAACGGAAGCCCATCGACACCTGCTCGCCA
CGTGCCACGCGAGGAGAGGGGACTGGAAGGGTGTGGTTGGCATCTTACAC
GGCTGCACTGGGGCCAAAAGCAGATACCTGTACGCGTATGCCTGCTTGGA
GTTGGACCGGCCCGCCGAAGCCGAGGCCGCCTTGCTGGGCCTCCAGGACG
TCCGGGAGAAGGGCCCGGTGCTGGCGCAGCACCTGCTTATGGCTCAGGTG
GGGGGATGGGGAGAGGGCAGGAGGGAGGGAGGGCGGGCGGGGGGGGACAA
GGACGGAGTGATCTGCCTCTTGCTTAGGCATAGTGGGGACGACAGACGCT
CAGCCCAATCCTGAGGGAGGGGACGAGGCCAAGGCCACGGTTAAGGAGTT
CCTACCGAGGACATCCTTCGTTCACCTTCCCTTTGTCACGGCTTCCTCTT
TGCTCCCCTCCTCCCCCCCTCCCTCCCTCCCTCCTTCCCTTCCAGCCCGC
CAAGGTCCCGGAGGGCGCCGCAGGGTTGCACCTGCTGGGGAGGATTTGTC
AGCGAGCCTGTCGGCCACAGCAAGCGCGAGAGTACTACCGGCTGAGTCTG
CAGATGGATCGCACGCTGTGGGCCTCATTCGAAGCCCTCTGCGCCTTGGA
AGGAGGGAAGGAGGAGCAAGGGGTGGAGGCAACGAAGGAGAGCGGGGGGG
AGGGCGGGGAAAGCGCGCAATGGTTTGGGCCACCGCTGGCGTGGGAGGAG
GGGAGCGACAGGAGCCTGCTTTCGGTCTGGGACAGGGGAGAGGTTCCGGC
GCCACGGGAGGAAGAGGGGGAGAA
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protein sequence of rna7844

>rna7844-protein ID=rna7844-protein|Name=rna7844|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
MFWVPLKRGAQFKASGCVLFLCTMLARTLASPSSISTSCRHQRQLYRHGM
PTRAFVSTAAALLHSHGDSAPKSVTDRPGYPIKWLATRQGGATEKRIFGL
GRGAVRMMSTPCLMTSTPDSNFKYPPAAASAIEKTNSYLASFADGNEEST
AGGSSPET
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mRNA from alignment at CM002474.1:109162..110166+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7844 ID=rna7844|Name=rna7844|organism=Nannochloropsis gaditana|type=mRNA|length=1005bp|location=Sequence derived from alignment at CM002474.1:109162..110166+ (Nannochloropsis gaditana)
ATGTTCTGGGTTCCCTTGAAGCGTGGTGCACAATTCAAGGCGAGCGGTTG
CGTCCTCTTTCTGTGTACCATGCTAGCACGCACACTGGCTTCCCCTTCGT
CTATATCTACTTCCTGCCGTCATCAAAGGCAGCTTTACCGGCATGGCATG
CCAACGCGGGCCTTCGTCTCGACCGCTGCGGCATTACTGCACAGTCACGG
TGACAGCGCCCCCAAAAGTGTCACGGATAGACCCGGATATCCCATAAAAT
GGTTAGCCACCAGACAAGGCGGTGCTACCGAGAAGCGCATTTTCGGCCTT
GGACGAGGGGCGGTGAGGATGATGAGCACCCCATGCCTCATGACGTCCAC
GCCCGACAGGTTAGGATATGAAGTTATacgggggagacggggaggcgTGC
TAAATTGTGCTCTCGTTTCCCTCGTGTGATTGGTCGCATGGCTaaccccc
ccctcgccccccctacCATAGCAACTTTAAATATCCTCCTGCGGCGGCCT
CTGCGATTGAGAAAACGAACAGCTATCTCGCCAGCTTTGCAGACGGAAAC
GAGGAAAGCACCGCGGTAAATGAGGGGTCTctgcgaggaggcgaggagga
aggagcgaggggggtgTTTCCTGGTGCAAGACTCACCTGGACCTCGGCCT
CTGGCTGTCTCATGctcgagccctcccctcgttctcTACCTTTCTTTACA
AAgtactcctccctccctccctccctccctccccccctccctccctccct
ccctcccctccctccctccctccgtcctccctgccttcccagGTTCCCCT
CGAAGTCGTGTCGAAGGACAAATTCGAGGCTTGGCTGGCCGAGCAGTCGC
CTCAGACCCGGGCTTTCCTGGCGTTCAAGGtgagcggggaagggaggggg
gaaggaggagggaggcagacaggaaggagagggagtcgTTGTTCCTATGC
CGATTGTAAATATATtgctggggaggggcagggggggagttCGCCAGAGA
CTTAA
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Coding sequence (CDS) from alignment at CM002474.1:109162..110166+

>rna7844 ID=rna7844|Name=rna7844|organism=Nannochloropsis gaditana|type=CDS|length=1431bp|location=Sequence derived from alignment at CM002474.1:109162..110166+ (Nannochloropsis gaditana)
ATGTTCTGGGTTCCCTTGAAGCGTGGTGCACAATTCAAGGCGAGCGGTTG
CGTCCTCTTTCTGTGTACCATGCTAGCACGCACACTGGCTTCCCCTTCGT
CTATATCTACTTCCTGCCGTCATCAAAGGCAGCTTTACCGGCATGGCATG
CCAACGCGGGCCTTCGTCTCGACCGCTGCGGCATTACTGCACAGTCACGG
TGACAGCGCCCCCAAAAGTGTCACGGATAGACCCGGATATCCCATAAAAT
GGTTAGCCACCAGACAAGGCGGTGCTACCGAGAAGCGCATTTTCGGCCTT
GGACGAGGGGCGGTGAGGATGATGAGCACCCCATGCCTCATGACGTCCAC
GCCCGACAGCAACTTTAAATATCCTCCTGCGGCGGCCTCTGCGATTGAGA
AAACGAACAGCTATCTCGCCAGCTTTGCAGACGGAAACGAGGAAAGCACC
GCGggggggagttCGCCAGAGACTTAAATGTTCTGGGTTCCCTTGAAGCG
TGGTGCACAATTCAAGGCGAGCGGTTGCGTCCTCTTTCTGTGTACCATGC
TAGCACGCACACTGGCTTCCCCTTCGTCTATATCTACTTCCTGCCGTCAT
CAAAGGCAGCTTTACCGGCATGGCATGCCAACGCGGGCCTTCGTCTCGAC
CGCTGCGGCATTACTGCACAGTCACGGTGACAGCGCCCCCAAAAGTGTCA
CGGATAGACCCGGATATCCCATAAAATGGTTAGCCACCAGACAAGGCGGT
GCTACCGAGAAGCGCATTTTCGGCCTTGGACGAGGGGCGGTGAGGATGAT
GAGCACCCCATGCCTCATGACGTCCACGCCCGACAGCAACTTTAAATATC
CTCCTGCGGCGGCCTCTGCGATTGAGAAAACGAACAGCTATCTCGCCAGC
TTTGCAGACGGAAACGAGGAAAGCACCGCGggggggagttCGCCAGAGAC
TTAAATGTTCTGGGTTCCCTTGAAGCGTGGTGCACAATTCAAGGCGAGCG
GTTGCGTCCTCTTTCTGTGTACCATGCTAGCACGCACACTGGCTTCCCCT
TCGTCTATATCTACTTCCTGCCGTCATCAAAGGCAGCTTTACCGGCATGG
CATGCCAACGCGGGCCTTCGTCTCGACCGCTGCGGCATTACTGCACAGTC
ACGGTGACAGCGCCCCCAAAAGTGTCACGGATAGACCCGGATATCCCATA
AAATGGTTAGCCACCAGACAAGGCGGTGCTACCGAGAAGCGCATTTTCGG
CCTTGGACGAGGGGCGGTGAGGATGATGAGCACCCCATGCCTCATGACGT
CCACGCCCGACAGCAACTTTAAATATCCTCCTGCGGCGGCCTCTGCGATT
GAGAAAACGAACAGCTATCTCGCCAGCTTTGCAGACGGAAACGAGGAAAG
CACCGCGggggggagttCGCCAGAGACTTAA
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Synonyms
Publications