EWM22851.1, cds7823 (CDS) Nannochloropsis gaditana

Overview
NameEWM22851.1
Unique Namecds7823
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:109162..109520 +
Alignment locationCM002474.1:109633..109726 +
Alignment locationCM002474.1:110143..110166 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22851.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101043g2.5896.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:109162..109520 +
CM002474.1supercontigCM002474.1:109633..109726 +
CM002474.1supercontigCM002474.1:110143..110166 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22851.1 vs. NCBI_GenBank
Match: gi|585103493|gb|EWM22851.1| (hypothetical protein Naga_101043g2 [Nannochloropsis gaditana])

HSP 1 Score: 327.405 bits (838), Expect = 1.566e-113
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 MFWVPLKRGAQFKASGCVLFLCTMLARTLASPSSISTSCRHQRQLYRHGMPTRAFVSTAAALLHSHGDSAPKSVTDRPGYPIKWLATRQGGATEKRIFGLGRGAVRMMSTPCLMTSTPDSNFKYPPAAASAIEKTNSYLASFADGNEESTAGGSSPET 158
            MFWVPLKRGAQFKASGCVLFLCTMLARTLASPSSISTSCRHQRQLYRHGMPTRAFVSTAAALLHSHGDSAPKSVTDRPGYPIKWLATRQGGATEKRIFGLGRGAVRMMSTPCLMTSTPDSNFKYPPAAASAIEKTNSYLASFADGNEESTAGGSSPET
Sbjct:    1 MFWVPLKRGAQFKASGCVLFLCTMLARTLASPSSISTSCRHQRQLYRHGMPTRAFVSTAAALLHSHGDSAPKSVTDRPGYPIKWLATRQGGATEKRIFGLGRGAVRMMSTPCLMTSTPDSNFKYPPAAASAIEKTNSYLASFADGNEESTAGGSSPET 158
The following BLAST results are available for this feature:
BLAST of EWM22851.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103493|gb|EWM22851.1|1.566e-113100.00hypothetical protein Naga_101043g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7844rna7844Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications