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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100035g44.3385.mrna |
| Orig protein id | gnl|cribi|Naga_100035g44.3385 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:406665..407289 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna783 ID=rna783|Name=rna783|organism=Nannochloropsis gaditana|type=mRNA|length=4685bp
GGACCACAGCCAGGACCACAGGGCGTTGCAAATACAAAAGAAATGGTCAC
TGCCCATGGAGTGACCAGGTCGATACCTACACTTGTTTTTGTAAGCAGCT
CTTCCCGCCTTTCCCCTTCACTTCCTGACGTTGGCGCGAAAAGGAAATAA
AAACCCGACGGCACGGTTAGCCCGGCCGACCTCCCACATCCCCCGACACG
CCCATGCTCCAGCCTGGTTGGAAAAAGCATCGTCTGCTTCAGGAGGCCGC
TCATCCACACAATATTGCAGTGGCCCCGCCTGAAGTTGCAGCAATGCCGT
AGTCGCCGAGTCATTGTCTTTTTCTTTGCCTCAATATAGCCCTCCGAAAG
GAAGGCAAAATGACGTCTTCACGAATGACGAGCATCCTGAAGTATTTAAG
ATACGCGTATGGATAATTCAAAGGTTTTTTCCTTAAAAGAAAGCATATTA
CTGATTTTCAGTTGTCGATATGGCTTCTAACCTAATCCTCTTGTTCACTC
CATCTCGAAACTTCCAAAACGTCACTTGTTACCTTTCCTCAATTTATTGC
GACAGGGCAGACAGCAAGACGCCTTTGTCGTTCTCATGTCGGGCACAACG
TCAAACCCTCATGCACCTTCTTCTGAAGCTGCAGTCAATTCTGACGGGTG
GAAAATGCCCGGCCCCAACATGGATCGCCTTGCCACTCTTCTTGCCCACG
ACCGCGAATTACAAGATGCTATGCCTGATCCACAGGTACAAGCACGCATA
GATAAGACGGCGACGACGATCGAGCTTGTACAACAAGTCTGCGAGGGTTA
TGCGGAAAGAGAGGCGCTCAAGTGGTGCGTGAATGGGGCACCGACCGCGG
ATTACACGGAATGTCTCACGTACCGCGACATCTGGAAGCGCGTCAGGGCC
ATGGCGACAGTGCTCTCAGGGAGAGGTTGGCTGCTAAAAAAGGACTTTGT
GGCCGTCTGTGGCTTTGCGAGCCCGGGCTGGGTCCTGATCGATGTGCTAG
CCCTGTATTTGGGTGCTGTGCTTGTTCCACTGCCGCTCAACGTGCCCTAC
GAAGATCTCAGGTCCATGCTCGAGGAGTCAGAGGCCCGGGTAGTTTTCTG
TGCCGCCGAGGAGGCGCACACCCTGGTTATGAACGTATTGGCAAAAGATG
GAGCCTGTCCAGGGGTAGAAACGGTGGTGGTCATGGACTATGGGGAAGAA
AGCAACGGGCAAGCCATGGTTCAAGCGCTACGTCCTGTATTGCCTGCGAC
CGTATTGCGCGTCCTCACGCTGGGCGAGCTGCTGACTGACGTCTCCCAAG
GAATAGTAGATAGTACAGAGCGGTATGGAACAACAGCGGCCGCCAGCAGC
TGCGGATTCCTCCCCCCCGCCGTTCCTGGAAGCCAGGGTTGGAGCGACGA
GTCGAACCCATTGCTCGGTTTGATGTACACATCCGGGAGCACGGGGAGGC
CGAAGGGCGCCATGTACACGGAGAAGCTCATGCGGGCCCTCTGGCACACG
GGCTTCTCCTGGGGGAAGGGGGAGGTCCCGGTCATCAGCCTGGGCTTCTT
GCCCCTCAACCACATCGTGGGCCGCGTGACCATCTACCAGGCCCTGTCGA
AGGGGGGCCGCGTCTACTTCGTGCGCCGGTCGGACATGTCCACGCTTTTT
GAAGACTTTGCCACGGCGCGGCCGACCAAGACGATGATGGTGCCACGCAT
TGCGAATATGGCCTACGAGACGTACCAGCTCAAGAAAATGGAGCTTCTTC
AGACCGTGGGTCTGTCGTCCTCCTCCCTGCCCACGGAGGAGCAGGCGCAA
GGCAAGCGTCTCAAGCTCGACGAGGTCGAACGCGCGGCCCGGGAATACAT
CCGAGACCGGGTGTTCGGAGGTCGCCTCCTATTCGCCATCGTGGGTACCG
CCCCTTCCTCCGCAGCCGTGTCGGCTTTGATCCAGGAGGCCTGCGAGATG
CCCATGGTCGAGGGGTACGGCTCTACCGAGTTGGGGGGAATTACGATCGA
AAACAGGATCAACGTCGCCACGGTCGTCAAATGGAAACTTATCGATGTCC
CTGAGCTGGGCTATACCTTGAAAGACCAGCCTTGCCCAAGGGGGGAGCTT
CTAGTGATGACGACGACTGGCATTCCTGGGTACTACAAGCACCCCAAAGC
GACCGCCGAATTGATCGACACCGAGGGTTTCTTCCATACTGGCGACATCA
TGGAGCAGCGGGGTCCCGAGGAATTGGTCTGGATCGACAGGAGAAAGAAC
GTTTTGAAGCTGGCTCAAGGGGAGTACTTGTCGATCAGCCGTTTGGAGGC
ACTCTATGCGGGCGACCCGGATGTCAAGAATATTTTCTTGTACGGAAACA
GCCTCCGATCTTACGTGCTGGCCGTGGTAGTCCCGTCTGAGGCCCTTGTA
GCGGCGGCCAAGGCGGGTTTGGAAGACGGGAACGGCGGGAACGGTCTGAA
AGGAAGTGCTCGCGACGAGCTTGCAGGGCAGGGGGAAGTAGAAGAAGAAG
CGGTGCTGGCGCGGTTGAAGCCGCTCTTGCGTCAGCGCCTGGACTCGATG
GCCAAGGAAGCAGGCATGGCCTCGTACGAAGTGCCTCGTGATTTTATCGT
GCAATTGGCCGGATTCACGCGGGAGAACAAACTGGTCACGGACTCGAACA
AACTGGCGCGTGCGCGGCTCAAAGAGACTTTTGGTCCTCGCCTCGAGGCT
ATGTATGACGCTGTCGAGCAACGGAAGGAAAAGCGGTTGGAACACTTGCA
CTCAGACCCGCAAGCATCCACAACTGACATGGTGCGGGCTGTCTTGGAGA
TGACGCTCGGGCTGGGGGAAGAGGTGGGCCTGGATGCTACCTTTGCGCAG
TTAGGGGGCGACTCCTTGAGCGCGGTGCGTGTAACCGAGCATTTGAAGAG
GCTTTGTGGGGTGGGTGTTCCTGTGGCCGAACTACTGAATCCGGCGATGA
CCCTAAGCTCTTTGATCCAACATCTGGATCTCAAGTTGAAAAGGGGGCAA
GTGGTGGGAGCTGAAGATATGGAGGAGACCGGGGAGGAGGAAATATATCG
ACGCGTACATGGGCTGGGTGATGACGACGCAGTCATATTCGCTCAAGATC
TGACGATCGGTAAATTTATACCGACAGCTGTACTTCATCCCCCAGAAGCA
AAGGTTGCCACAGATTGGGCAGCGGGGGCGGAAAAGGGGTTTGAAAAGAG
AGAGGGGAGGGTACGAGGTGTCTTGTTGACGGGCGCCAATGGATTTTTGG
GTCGTTTTCTTTTGCTAGAGCTTCTCCAGAAGCTCTGCGCCCAAACGGAC
TATAAATTGGGCGGAACGGGGAGAGTTTACTGTCTTATACGGGGGCGTGA
CGAGGCTGCGGCCAAATGTAGGCTCTGGGAAGCTGTGGGGGCGTCGTTAC
TACAGGCACACGAAGATCGCATCGTGGTACTTGCAGGGGACGTCAGTCGT
CCTCACTTGGGGCTGAGCGGCGACACGTATGCAAACCTCTTAGAAAACGT
TGATCTCGTCCTTCACGCAGGGGCTCTGGTCAATCATAACCTGTCGTACC
GGTCTCTCTTCGGCCCGAATGTCGTGGGAACTGCGAACATAATCAAGTTC
TGCCTCGCACGTCCATCGCATCCCAAACCCTTGCATTACGTGTCAACGAT
TGCGGTAACGATGGGAGAGGGCGGCCCAGGAAGAGAAGTGCATGAAGGGC
ACCTTGGATACTGCTGGGGGAATCAGAGATTTGTCAGAAAGGGGACTTAT
GCCGAGGGCTATGGGGCCTCGAAATGGGCAGCAGAAGTCCTCTTGCAAAA
TGTGCACAAGGAGACTGGCCTGCCTGTTGTTGCCTACAGGTGCAGCATGA
TTTTGCCGCACTCATCATTGCCCGGGCAGATAAATGTCGCAGACGTTTTC
ACTAGATTGCTAGCAGGAGTGATTTATACAGGAGTAGCCCCAGCGTCATT
CACGGATGGACACGGCCCTGCACCGGCTTATGATGGATCACCGGTTGATT
TCGTGGCGGGCGCAATCGTGGCGATTGTCTGGAAAGGCTTTCATCGCTCG
ACCGGGCAGGTGGACGTGGACGCAGGACAGGAAATTGAAGCAAGCGGCTG
TCGACTGTTCCACGTGATCAATCCTCACGTACAGAAGGGGCCCTCTTTGG
ACGACATGATTGATTGGGTCCAATCTGCTGGGTATGACGTTGAACGCATT
ACCCCCTATCGAACCTGGCTGGAGACTTTTGAAAGCAAGTTGCAAGCCCT
CCCATCCGAAAAGCGCAACCAATCCCCCCTTCCAGTTCTAAAACATTGGC
AGGATCCCTCGCCGTCGCGCATCCACGCACAGGAAATTTCGGTTGTGGAC
GCTTCTCGCTTCCGAGCGGCTGTCAAAGAGCTTACAAGATGGGGGGACGT
ACCCTGCCTTTGCGAGGGCTACTTGCTCACATGTTTGTACCAGATGTCCA
AAGTAGGGTTGATCTCGGCTACGCCTGCCGTGATGCTCGCGAAATTAGCC
GAAAAATAGCGGACGACATAAATGACGTGTAGTAGTGGTCGAGATCAGGA
ACTTCAAAGTAGCAAAATGCATATCATGCCAAAACAAAGTGGTTTTTTTA
TGCAAAGTACTCAGTTACATGAAACCTGTTGGAAGAGCTCCTTATTTAGA
AAGTAACCATAACCCTAAAACAGCACGAACACGAG back to topprotein sequence of rna783 >rna783-protein ID=rna783-protein|Name=rna783|organism=Nannochloropsis gaditana|type=polypeptide|length=181bp
MNGWLFVRDEGTSQEDDLDLGPLPRIEGHAVIFERPTHETFNHKVIYVQT
SPCPSRQRFECPKPEFWVNDQDALSLTLTFHAWGLKAEIGTRDLVMCAGH
KRPGQCWPMAGTHQDKNSKHVPDCQMEIGSGIFAHICVKSSSTCVLSQRY
LRKSKPQGVQSACPLNAARVRAVLGLWLLSK back to topmRNA from alignment at CM002456.1:406665..407289- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna783 ID=rna783|Name=rna783|organism=Nannochloropsis gaditana|type=mRNA|length=625bp|location=Sequence derived from alignment at CM002456.1:406665..407289- (Nannochloropsis gaditana)
ATGAATGGGTGGCTGTTCGTGCGTGACGAAGGGACGAGCCAAGAGGACGA
CCTTGATCTGGGTCCGTTGCCCAGGATAGAAGGTCATGCAGTCATTTTTG
AACGTCCCACAGTGGAAAATGACCACTTTATATAATCCCGAAGATTGGTA
TGTGCTTTGAAACATCACAGAACTTTTTTGATGTGGAAAGCACGAGACTT
TCAATCACAAAGTCATATACGTACAGACATCTCCCTGTCCTAGCAGGCAG
CGATTCGAATGCCCAAAACCAGAATTCTGGGTGAATGACCAAGATGCCCT
GAGTCTAACCCTAACCTTTCATGCCTGGGGCCTCAAGGCAGAGATCGGCA
CCCGCGATCTGGTGATGTGCGCGGGGCACAAGCGGCCCGGGCAGTGCTGG
CCCATGGCGGGAACCCACCAAGACAAGAATAGTAAACATGTGCCGGATTG
TCAGATGGAAATAGGAAGCGGCATCTTTGCACACATATGCGTGAAAAGCT
CTAGCACGTGTGTGTTGTCTCAAAGATACTTGCGAAAATCTAAGCCGCAG
GGTGTACAAAGCGCATGTCCACTAAATGCTGCTCGTGTTCGTGCTGTTTT
AGGGTTATGGTTACTTTCTAAATAA back to topCoding sequence (CDS) from alignment at CM002456.1:406665..407289- >rna783 ID=rna783|Name=rna783|organism=Nannochloropsis gaditana|type=CDS|length=1092bp|location=Sequence derived from alignment at CM002456.1:406665..407289- (Nannochloropsis gaditana)
CACGAGACTTTCAATCACAAAGTCATATACGTACAGACATCTCCCTGTCC
TAGCAGGCAGCGATTCGAATGCCCAAAACCAGAATTCTGGGTGAATGACC
AAGATGCCCTGAGTCTAACCCTAACCTTTCATGCCTGGGGCCTCAAGGCA
GAGATCGGCACCCGCGATCTGGTGATGTGCGCGGGGCACAAGCGGCCCGG
GCAGTGCTGGCCCATGGCGGGAACCCACCAAGACAAGAATAGTAAACATG
TGCCGGATTGTCAGATGGAAATAGGAAGCGGCATCTTTGCACACATATGC
GTGAAAAGCTCTAGCACGTGTGTGTTGTCTCAAAGATACTTGCGAAAATC
TAAGCCGCAGGGTGTACAAAGCGCATGTCCACTAAATGCTGCTCGTGTTC
GTGCTGTTTTAGGGTTATGGTTACTTTCTAAATAAATGAATGGGTGGCTG
TTCGTGCGTGACGAAGGGACGAGCCAAGAGGACGACCTTGATCTGGGTCC
GTTGCCCAGGATAGAAGGTCATGCAGTCATTTTTGAACGTCCCACACACG
AGACTTTCAATCACAAAGTCATATACGTACAGACATCTCCCTGTCCTAGC
AGGCAGCGATTCGAATGCCCAAAACCAGAATTCTGGGTGAATGACCAAGA
TGCCCTGAGTCTAACCCTAACCTTTCATGCCTGGGGCCTCAAGGCAGAGA
TCGGCACCCGCGATCTGGTGATGTGCGCGGGGCACAAGCGGCCCGGGCAG
TGCTGGCCCATGGCGGGAACCCACCAAGACAAGAATAGTAAACATGTGCC
GGATTGTCAGATGGAAATAGGAAGCGGCATCTTTGCACACATATGCGTGA
AAAGCTCTAGCACGTGTGTGTTGTCTCAAAGATACTTGCGAAAATCTAAG
CCGCAGGGTGTACAAAGCGCATGTCCACTAAATGCTGCTCGTGTTCGTGC
TGTTTTAGGGTTATGGTTACTTTCTAAATAAATGAATGGGTGGCTGTTCG
TGCGTGACGAAGGGACGAGCCAAGAGGACGACCTTGATCTGGGTCCGTTG
CCCAGGATAGAAGGTCATGCAGTCATTTTTGAACGTCCCACA back to top
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