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Properties
| Property Name | Value |
|---|
| Product | RNA binding protein |
| Orig transcript id | gnl|cribi|Naga_100341g2.8447.mrna |
| Orig protein id | gnl|cribi|Naga_100341g2.8447 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002474.1 | supercontig | CM002474.1:64651..66560 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7828 ID=rna7828|Name=rna7828|organism=Nannochloropsis gaditana|type=mRNA|length=512bp
TTCCGAGCAGGGACAAGACCCTGATGCCTCCGACAAAACTACTTCAGAAG
TCCGCCTCGTCTCTACGATGGGTCATCCTCCTGGCAGCATCGCTCCTAAT
GCTAAGCAATTACTTCGTGTATGACATTCCAGCCTCGTTGAAGGACTTGA
TTCGTCAAAACATGGGCCTGGACAAGAGTGAATTCGAGGTACGAAGGAAA
AAGAAGGGTGTAGGGAGGAACATATCACCCTAACACTCCCTCGCCTAGGG
GTCGCTGGCGTGCGATTCTCAGCTAGCGATCAAGAAATGTCCCTGCTTTT
CCCAAAATTTGAACGCAGCTACAATGTCCGCTAACAACCGTCGGCCGACG
TCTTTGTACCCTTCCTCTACACCGTTTATTAACCCTAACCCTTCCCTGCA
GCCCATGTATTCGCTCTTCTACACAGTGTACTCCCTCCCCAACATCGTCC
TTCCCTTTTTCGGGGGCATTTTTGTCGATAAATTTGGAGCACGCATTTGT
CTAATCGGTCAG back to topprotein sequence of rna7828 >rna7828-protein ID=rna7828-protein|Name=rna7828|organism=Nannochloropsis gaditana|type=polypeptide|length=532bp
MGKSSKSKADKTLGADVVVQSKGGSAEGTKAVGKKGKKAAKPVEPSSSSS
SDSSSDEETAPTTNGTAGKKGGKVVAKPVAASSDSDDDSSSSSSEDEAPA
PKKATPAAGKKEKLTKKKAAPESSDSDDSGSESDDSSDEEEAAVKPATPA
RGKTTAPSKKAEPESSSSESSDSSDEEEEEVVAAKPKAAEESSDESSSDS
EEEEEEEEEEEKAATKAESSESGSESSSSEEDEDEDEDEEEEETAVAASK
KRKGGEEGGQEKKKSKGAASPDEDRKVFVQGLPWSATEEEVRAFFQKCGP
MTSVELPLKDGRSSGTAYIVFGEEDGVGKAVAMNEEIFGDSGRWVRVRKY
EPTAAGKDGGKGMGFARPPSEKPEGCMSVFIGNLSWNIDEETIRSAFASC
GEVTSVRFATDRETGEFRGFGHVDFADETAPEAAVQMAGTPVMGREIRVD
YAQPRPPREGGFGGGGRGGGRGGGRGGGRSFGGGGGGGFGGGRGGGRGGG
RGGGRGGGRDGAINKNRGSIQAFAGNKKTFDD back to topmRNA from alignment at CM002474.1:64651..66560+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7828 ID=rna7828|Name=rna7828|organism=Nannochloropsis gaditana|type=mRNA|length=1910bp|location=Sequence derived from alignment at CM002474.1:64651..66560+ (Nannochloropsis gaditana)
CTATCCGTCTTACAAAACACGGTCAAGCGTTTTTATGGATTGACGCGCAC
GAAAAGACACCCTGATAGCCTTGAATGGCGGggcccatctccaccaccca
aAGCTGTCCACAGCCTCATCCCTTTTTCTCGCGCTTTCATCCGACACACC
AGCATACTTCCACAGACATAAGCTTTCATCTCAAGCATGGGTAAATCAAG
CAAATCCAAGGCGGACAAAACACTGGGTGCGGACGTGGTCGTCCAGAGCA
AAGGTGGCAGCGCCGAGGGCACGAAGGCGGTCGGCAAGAAAGGCAAGAAA
GCAGCGAAACCTGTcgagccctcttcctcttcctccagcgaCTCCTCGTC
CGACGAGGAAACTGCGCCGACCACCAATGGCACGGCGGGCAAAAAAGGGG
GCAAGGTTGTGGCCAAGCCGGTGGCAGCAAGCAGTGACTCGGACGatgat
tcctcctcctcctcttccgaggacgaggccccTGCGCCCAAGAAGGCGAC
GCCAGCGGCCggcaagaaagagaagcTGACCAAGAAGAAAGCAGCGCCTG
AATCGAGCGACAGCGACGATTCGGGTTCGGAGTCGGACGACAGcagtgat
gaggaggaggcagcggtgAAGCCAGCCACTCCCGCCCGTGGGAAAACGAC
GGCTCCCTCGAAGAAGGCAGAGCCTGAGAGCAGCAGCTCCGAGAGCTCTG
Acagcagcgacgaggaggaggaggaggtggtggcggcgaaacccaaggcg
gccgaggagTCGTCGGAcgagagcagcagcgacagtgaggaggaggagga
ggaggaggaggaggaggagaaggcggcgaccAAGGCAGAGTCGAGCGAGA
GTGGCAGTGAatcttcttcttccgaggaggatgaggacgaggacgaggac
gaggaggaggaggagacggcggtTGCCGCGTCCAAGAAacggaaaggcgg
ggaggagggcgggcaggagaagaagaagagcaagggtgCCGCAAGCCCCG
ACGAGGACCGGAAGGTATTCGTGCAAGGGCTGCCCTGGTCGgcgacagag
gaggaagtgcggGCTTTCTTCCAAAAATGCGGGCCCATGACCAGCGTGGA
GCTCCCCTTGAAGGACGGGCGCTCCTCGGGAACCGCCTACATTGTCtttg
gggaggaggacggggtggggaaggcggtggcgatGAACGAGGAGATCTTC
GGAGATAGCGGCCGTTGGGTCCGGGTTCGGAAATACGAGccgacggcggc
ggggaaggacggggggaaagggatgggtTTTGCTCGGCCTCCGTCGGAGA
AACCGGAAGGATGCATGAGCGTTTTCATCGGAAATTTGTCGTGGAACATC
GACGAGGAGACGATTCGGTCGGCCTTTGCCAGCTGTGGGGAGGTGACGAG
CGTCCGTTTCGCCACGGACCGGGAGACCGGGGAATTTCGGGGATTCGGCC
ACGTGGATTTTGCCGACGAGACGGCTCCCGAGGCGGCGGTGCAGATGGCG
GGCACGCCGGTCATGGGCCGGGAGATCCGAGTCGATTATGCCcagccgcg
tcctcctcgcgaGGGTGGGtttggtgggggaggaagggggggaggtcggg
ggggagggcgggggggagggcggtcgtttgggggggggggagggggcggg
ttcggaggagggaggggcggagggaggggcggaggacgtggcggaggacg
agggggggggcgagacgGGGCGATCAACAAGAACCGAGGGAGCATTCAGG
CGTTTGCGGGGAACAAGAAGACATTCGACGACTGAGAAAATGGGCGTTGG
TGACGTGGTAGGCGCTGATCGgtgtggggggaaggggggagaaagggagg
gaaagagggagggagatggggcaggtcggacgtggaggaaaagggcgaga
gcGGAACGGG back to topCoding sequence (CDS) from alignment at CM002474.1:64651..66560+ >rna7828 ID=rna7828|Name=rna7828|organism=Nannochloropsis gaditana|type=CDS|length=1599bp|location=Sequence derived from alignment at CM002474.1:64651..66560+ (Nannochloropsis gaditana)
ATGGGTAAATCAAGCAAATCCAAGGCGGACAAAACACTGGGTGCGGACGT
GGTCGTCCAGAGCAAAGGTGGCAGCGCCGAGGGCACGAAGGCGGTCGGCA
AGAAAGGCAAGAAAGCAGCGAAACCTGTcgagccctcttcctcttcctcc
agcgaCTCCTCGTCCGACGAGGAAACTGCGCCGACCACCAATGGCACGGC
GGGCAAAAAAGGGGGCAAGGTTGTGGCCAAGCCGGTGGCAGCAAGCAGTG
ACTCGGACGatgattcctcctcctcctcttccgaggacgaggccccTGCG
CCCAAGAAGGCGACGCCAGCGGCCggcaagaaagagaagcTGACCAAGAA
GAAAGCAGCGCCTGAATCGAGCGACAGCGACGATTCGGGTTCGGAGTCGG
ACGACAGcagtgatgaggaggaggcagcggtgAAGCCAGCCACTCCCGCC
CGTGGGAAAACGACGGCTCCCTCGAAGAAGGCAGAGCCTGAGAGCAGCAG
CTCCGAGAGCTCTGAcagcagcgacgaggaggaggaggaggtggtggcgg
cgaaacccaaggcggccgaggagTCGTCGGAcgagagcagcagcgacagt
gaggaggaggaggaggaggaggaggaggaggagaaggcggcgaccAAGGC
AGAGTCGAGCGAGAGTGGCAGTGAatcttcttcttccgaggaggatgagg
acgaggacgaggacgaggaggaggaggagacggcggtTGCCGCGTCCAAG
AAacggaaaggcggggaggagggcgggcaggagaagaagaagagcaaggg
tgCCGCAAGCCCCGACGAGGACCGGAAGGTATTCGTGCAAGGGCTGCCCT
GGTCGgcgacagaggaggaagtgcggGCTTTCTTCCAAAAATGCGGGCCC
ATGACCAGCGTGGAGCTCCCCTTGAAGGACGGGCGCTCCTCGGGAACCGC
CTACATTGTCtttggggaggaggacggggtggggaaggcggtggcgatGA
ACGAGGAGATCTTCGGAGATAGCGGCCGTTGGGTCCGGGTTCGGAAATAC
GAGccgacggcggcggggaaggacggggggaaagggatgggtTTTGCTCG
GCCTCCGTCGGAGAAACCGGAAGGATGCATGAGCGTTTTCATCGGAAATT
TGTCGTGGAACATCGACGAGGAGACGATTCGGTCGGCCTTTGCCAGCTGT
GGGGAGGTGACGAGCGTCCGTTTCGCCACGGACCGGGAGACCGGGGAATT
TCGGGGATTCGGCCACGTGGATTTTGCCGACGAGACGGCTCCCGAGGCGG
CGGTGCAGATGGCGGGCACGCCGGTCATGGGCCGGGAGATCCGAGTCGAT
TATGCCcagccgcgtcctcctcgcgaGGGTGGGtttggtgggggaggaag
ggggggaggtcgggggggagggcgggggggagggcggtcgtttggggggg
ggggagggggcgggttcggaggagggaggggcggagggaggggcggagga
cgtggcggaggacgagggggggggcgagacgGGGCGATCAACAAGAACCG
AGGGAGCATTCAGGCGTTTGCGGGGAACAAGAAGACATTCGACGACTGA back to top
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