rna7826, rna7826 (mRNA) Nannochloropsis gaditana

Overview
Namerna7826
Unique Namerna7826
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1127
Alignment locationCM002474.1:61230..62445 -

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Properties
Property NameValue
Productmajor facilitator superfamily
Orig transcript idgnl|cribi|Naga_100819g3.1351.mrna
Orig protein idgnl|cribi|Naga_100819g3.1351
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:61230..62445 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100819g3gene7582Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7826rna7826-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22869.1cds7805Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7826 ID=rna7826|Name=rna7826|organism=Nannochloropsis gaditana|type=mRNA|length=1127bp
CTCTCACGCTATTCCCACAAACAGACGCTGACAGGCGTTTGCTATGTCAC
CACCGGCCCTGTCATCGTCATCCTTGGACAGCAATTTCCCCACCGTATCA
TCGTTTTTAACTGCTAAAGTGCTTCCCGGGTCATCGCACGATGCTCGTGC
CCTCCTCCTCACGTCTCTGGCCATGGTGTCTTATGCGGAAGGAGTCAAAC
TCCTTGCCACTCGTAATATTTGTGCTTCTACGACCGCACGAAAGCTGATG
CACATCGGCTGCGGCCCTATCTTCTTGCTTTGTTGGCCGCTGTTTTCTTC
TTTGCCTTCTGCCTCGTACTTTGCGGCTGGAGCACCCCTTGCCCTGACAT
CATTCTTCACTATCGTGGGCCTGGGTATCATAGTCAATCCAGCGACCGTC
AAAAGTATGAGCAGGACAGGTGCGAGGCAAGAGCTTTTGCGCGGGCCTTT
ATTTTATGGTAGCGTTATGATAATTGCAACCCTTCTGTTCTGGCGACGAC
TCACGGCAGCCTTGTGTATATCCTGTCTGTGTGCTGGTGATGGTTTCGCT
GACGTGGTTGGCCGAAAGTTTGCGCCCGCTGTCCCGTCCTATGGCTTTGA
GAAGAAGCAAGACGACCTCTTGCGCCGTCAGAAAACCCTCGGGCGCGGAC
GGATCCCCTGGTGCCCCAGCAAGTCGTGGATTGGGACCGTGGGATTTATC
GTAGCCAGCTCGTTCACCTCCGCCTGCTTCGTCCTGTACAGTTCTCGGCA
AGGCTGGACCATCGATGACGGAGGACGGCACGGGCGGAAGGGAATGGAAC
GGGTATGGAGGAGGGTGTGGGGATCCACCTTGTTGAGCGCGGCGGCAGAG
ACCTTGCCGGTGCCGGAGGGGTGGGACAATTTGATGGTGTTTGGGGCGGC
CTTGTTGGCTGACTGGCTAGTCATGAGAGGTGCGAGGACGTCGGTGTAGC
AGTGAACAGGGGTCATGCGCGGAATGGGAGAAGGGTAGGGGGCCGGTCGC
AAAAGACAGGGCCCGGGGCATGCTGGCAGGGAACGAACTGAACGTATAGA
GTCAGAGAATGACCGAGTACAGCGACATCTATGGCTAGAGTGGGGGAAAT
TTTATGTACACTTATTATTGGTTATTG
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protein sequence of rna7826

>rna7826-protein ID=rna7826-protein|Name=rna7826|organism=Nannochloropsis gaditana|type=polypeptide|length=134bp
MPYWRSLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAI
QNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDS
RGGGGGTCASFFLARLCVTAGIKRETLKDRLWHG
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mRNA from alignment at CM002474.1:61230..62445-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7826 ID=rna7826|Name=rna7826|organism=Nannochloropsis gaditana|type=mRNA|length=1216bp|location=Sequence derived from alignment at CM002474.1:61230..62445- (Nannochloropsis gaditana)
ATGCGTGGGCATTAACAGGCGCAGGAATGAATATATATATATATATATAT
ATATATATAATATAAGTATCCACGCCTTTTGACCACAGCCTATTGGCGCT
CGCTCTCGCCGGCCGTCCCCCTTGTCGGCCAAGGCCTCGCCTACAGGTGG
GGGGATATCTCCCTCTTTCCCCCCCTTCTCCCTCCCCCCCCCTCCCTCGT
TCGCCCCTTGATCGACCACACGTCTCTTTGGTTTTATGAGACATCCATTC
CTCACGCTCCTTTGATCCCCCTCGCTTCCTTCCCTTTCTCCCTCCCTCCC
TCTCTCCTGCTCTCGTAGCGCGTTTGCCGCCGTCCTCTGGCCCTCCGTGC
CGTTTACCGTGCCAGAAGATCGGGTAGGGGTTGCCTACGGGCTCACCACC
GCCATCCAAAACGCCGGCCTGGCCCTCTTCCCGCTCATGGCGGCCGCAAT
ATACAAGGTAGAGTCACGTACCAGGGGGGGGGGTCCCCGTGGGACATGCA
CCCCCCTTCCATCCCTTCCACCCCCTCATCCACCCCTCGCATTCCCCCGC
CCGCCCCCACCAGGCTGCTGGCTCAGAGTACATCCCCCACGTCGAACTCC
TCTTCGTCTACTTGGCCGTGGTCGGACTCGCCTTTGGGCTTTGGCTGAAC
GTGCTGGACTCCCGGTGAGTGGACCGAGAGGGTGGGGCGGGGGGAGGACA
CGGGGGGAGATTGACATCGATTCGGAAGTGGCGCTCTCCATGAGCCTCAA
GCATGATCCCAGAGGTGAAAGGTGATTGTAGAGAGAGAGAAATTGAGAGG
ACGGAAGGGAGGAGCTTGCGATGATGCCGTGTGACATGTGTCTGAAAATG
ATGGGGAAAGAAGGGGCTTGAAGAAGGCACAGAGGGGGAAAGGACTTCAG
TGGAGGCTTCGAGCGGCAAAGACCGAGGACATGGGTCTGTGTATGGTCCT
TGTTCACTCATCTTAATCTCCTCGCTATTCATCTCCCTCCTTTTCTCTCT
TCGCCTCAATTTATCTCCCTCCTCCCCCTCCAGGGCGGGAAACGTCTTAA
ATCGAGCCCACTGGGCGGGGGGGAAAGGAAAGCGAGATAAGAAGCCGTTG
CTGCATGAGGTAGTGGAGGGGGTGGAGGTACCTGTGCCAGCTTCTTCCTC
GCCCGTCTATGTGTGACCGCAGGGATCAAGCGTGAGACATTGAAGGACCG
TCTCTGGCACGGATAG
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Coding sequence (CDS) from alignment at CM002474.1:61230..62445-

>rna7826 ID=rna7826|Name=rna7826|organism=Nannochloropsis gaditana|type=CDS|length=2025bp|location=Sequence derived from alignment at CM002474.1:61230..62445- (Nannochloropsis gaditana)
TGGAGGGGGTGGAGGTACCTGTGCCAGCTTCTTCCTCGCCCGTCTATGTG
TGACCGCAGGGATCAAGCGTGAGACATTGAAGGACCGTCTCTGGCACGGA
TAGGCTGCTGGCTCAGAGTACATCCCCCACGTCGAACTCCTCTTCGTCTA
CTTGGCCGTGGTCGGACTCGCCTTTGGGCTTTGGCTGAACGTGCTGGACT
CCCGCGCGTTTGCCGCCGTCCTCTGGCCCTCCGTGCCGTTTACCGTGCCA
GAAGATCGGGTAGGGGTTGCCTACGGGCTCACCACCGCCATCCAAAACGC
CGGCCTGGCCCTCTTCCCGCTCATGGCGGCCGCAATATACAAGCCTATTG
GCGCTCGCTCTCGCCGGCCGTCCCCCTTGTCGGCCAAGGCCTCGCCTACA
GATGCTGGAGGGGGTGGAGGTACCTGTGCCAGCTTCTTCCTCGCCCGTCT
ATGTGTGACCGCAGGGATCAAGCGTGAGACATTGAAGGACCGTCTCTGGC
ACGGATAGGCTGCTGGCTCAGAGTACATCCCCCACGTCGAACTCCTCTTC
GTCTACTTGGCCGTGGTCGGACTCGCCTTTGGGCTTTGGCTGAACGTGCT
GGACTCCCGCGCGTTTGCCGCCGTCCTCTGGCCCTCCGTGCCGTTTACCG
TGCCAGAAGATCGGGTAGGGGTTGCCTACGGGCTCACCACCGCCATCCAA
AACGCCGGCCTGGCCCTCTTCCCGCTCATGGCGGCCGCAATATACAAGCC
TATTGGCGCTCGCTCTCGCCGGCCGTCCCCCTTGTCGGCCAAGGCCTCGC
CTACAGATGCTGGAGGGGGTGGAGGTACCTGTGCCAGCTTCTTCCTCGCC
CGTCTATGTGTGACCGCAGGGATCAAGCGTGAGACATTGAAGGACCGTCT
CTGGCACGGATAGGCTGCTGGCTCAGAGTACATCCCCCACGTCGAACTCC
TCTTCGTCTACTTGGCCGTGGTCGGACTCGCCTTTGGGCTTTGGCTGAAC
GTGCTGGACTCCCGCGCGTTTGCCGCCGTCCTCTGGCCCTCCGTGCCGTT
TACCGTGCCAGAAGATCGGGTAGGGGTTGCCTACGGGCTCACCACCGCCA
TCCAAAACGCCGGCCTGGCCCTCTTCCCGCTCATGGCGGCCGCAATATAC
AAGCCTATTGGCGCTCGCTCTCGCCGGCCGTCCCCCTTGTCGGCCAAGGC
CTCGCCTACAGATGCTGGAGGGGGTGGAGGTACCTGTGCCAGCTTCTTCC
TCGCCCGTCTATGTGTGACCGCAGGGATCAAGCGTGAGACATTGAAGGAC
CGTCTCTGGCACGGATAGGCTGCTGGCTCAGAGTACATCCCCCACGTCGA
ACTCCTCTTCGTCTACTTGGCCGTGGTCGGACTCGCCTTTGGGCTTTGGC
TGAACGTGCTGGACTCCCGCGCGTTTGCCGCCGTCCTCTGGCCCTCCGTG
CCGTTTACCGTGCCAGAAGATCGGGTAGGGGTTGCCTACGGGCTCACCAC
CGCCATCCAAAACGCCGGCCTGGCCCTCTTCCCGCTCATGGCGGCCGCAA
TATACAAGCCTATTGGCGCTCGCTCTCGCCGGCCGTCCCCCTTGTCGGCC
AAGGCCTCGCCTACAGATGCTGGAGGGGGTGGAGGTACCTGTGCCAGCTT
CTTCCTCGCCCGTCTATGTGTGACCGCAGGGATCAAGCGTGAGACATTGA
AGGACCGTCTCTGGCACGGATAGGCTGCTGGCTCAGAGTACATCCCCCAC
GTCGAACTCCTCTTCGTCTACTTGGCCGTGGTCGGACTCGCCTTTGGGCT
TTGGCTGAACGTGCTGGACTCCCGCGCGTTTGCCGCCGTCCTCTGGCCCT
CCGTGCCGTTTACCGTGCCAGAAGATCGGGTAGGGGTTGCCTACGGGCTC
ACCACCGCCATCCAAAACGCCGGCCTGGCCCTCTTCCCGCTCATGGCGGC
CGCAATATACAAGCCTATTGGCGCTCGCTCTCGCCGGCCGTCCCCCTTGT
CGGCCAAGGCCTCGCCTACAGATGC
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Synonyms
Publications