EWM22869.1, cds7805 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|585103518|gb|EWM22869.1| (major facilitator superfamily [Nannochloropsis gaditana]) HSP 1 Score: 268.47 bits (685), Expect = 4.944e-91 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 Query: 1 MPYWRSLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGGGGTCASFFLARLCVTAGIKRETLKDRLWHG 134 MPYWRSLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGGGGTCASFFLARLCVTAGIKRETLKDRLWHG Sbjct: 1 MPYWRSLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGGGGTCASFFLARLCVTAGIKRETLKDRLWHG 134
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|224001012|ref|XP_002290178.1| (transporter belonging to the MFS superfamily [Thalassiosira pseudonana CCMP1335] >gi|220973600|gb|EED91930.1| transporter belonging to the MFS superfamily [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 121.709 bits (304), Expect = 7.915e-30 Identity = 59/98 (60.20%), Postives = 71/98 (72.45%), Query Frame = 0 Query: 6 SLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGG 103 SP VPL+GQG+AYS +A+VLWPSVP TV + G A+G+ T+IQN GLALFPLM AAIY A+G +YIP+VEL FV A GL GL + LD R G Sbjct: 357 QFSPVVPLIGQGIAYSLYASVLWPSVPLTVAKQYTGTAFGVITSIQNIGLALFPLMIAAIYNASGQQYIPNVELFFVSCATAGLIVGLTMIQLDRRSG 454
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|397589060|gb|EJK54515.1| (hypothetical protein THAOC_25852 [Thalassiosira oceanica]) HSP 1 Score: 104.76 bits (260), Expect = 3.813e-24 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 0 Query: 6 SLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 S+ P +P+VGQG+AYS +A+VLWPSVP TVP G A+G+ T++QN GLALFPL A IY++ G Y+P VEL F A VG+A G+ +N+LD R GG Sbjct: 237 SIPPVLPMVGQGVAYSLYASVLWPSVPLTVPRRLTGTAFGVITSLQNVGLALFPLAVAGIYRSGGGRYVPGVELFFASCAAVGVAVGVAMNMLDMRQGG 335
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|219112637|ref|XP_002178070.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410955|gb|EEC50884.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 105.531 bits (262), Expect = 7.266e-24 Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 0 Query: 4 WRSLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 + + PA+PL+GQGLAY+ +++VLWPS+ TVP+ GVA+G+ T+IQN GL L P+ A+IY ++G YIP+VEL F AV G G+ +N LD G Sbjct: 458 FTTFRPAIPLIGQGLAYALYSSVLWPSITLTVPQRSTGVAFGVITSIQNIGLTLVPMAIASIYTSSGHCYIPYVELFFTCCAVSGAMLGIGVNFLDQLTGN 558
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|301122213|ref|XP_002908833.1| (Major Facilitator Superfamily (MFS) [Phytophthora infestans T30-4] >gi|262099595|gb|EEY57647.1| Major Facilitator Superfamily (MFS) [Phytophthora infestans T30-4]) HSP 1 Score: 98.9821 bits (245), Expect = 1.127e-21 Identity = 55/94 (58.51%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 11 VPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 VPLV QG+AYS FAA LWPSVP+ V VG AYG TAIQN GLALFPL AA + YIP VELLFV V+G G+ LNV+D + G Sbjct: 376 VPLVLQGVAYSVFAAALWPSVPYVVEAKHVGTAYGAITAIQNIGLALFPLAVAAEFN-HDDRYIPGVELLFVSFGVLGSLVGIALNVVDYQNGS 468
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|675191731|ref|XP_008904750.1| (hypothetical protein PPTG_10966 [Phytophthora parasitica INRA-310] >gi|566024950|gb|ETI47861.1| hypothetical protein F443_08001 [Phytophthora parasitica P1569] >gi|567962255|gb|ETK87782.1| hypothetical protein L915_07826 [Phytophthora parasitica] >gi|567990983|gb|ETL41201.1| hypothetical protein L916_07756 [Phytophthora parasitica] >gi|568020235|gb|ETL94369.1| hypothetical protein L917_07641 [Phytophthora parasitica] >gi|568050655|gb|ETM47589.1| hypothetical protein L914_07719 [Phytophthora parasitica] >gi|568095545|gb|ETN10313.1| hypothetical protein PPTG_10966 [Phytophthora parasitica INRA-310] >gi|570328618|gb|ETO76566.1| hypothetical protein F444_08046 [Phytophthora parasitica P1976] >gi|570952432|gb|ETP17689.1| hypothetical protein F441_07970 [Phytophthora parasitica CJ01A1] >gi|570986751|gb|ETP45680.1| hypothetical protein F442_07939 [Phytophthora parasitica P10297] >gi|970644846|gb|KUF85525.1| Major Facilitator Superfamily (MFS) [Phytophthora nicotianae]) HSP 1 Score: 98.9821 bits (245), Expect = 1.322e-21 Identity = 55/94 (58.51%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 11 VPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 VPLV QG+AYS FAA LWPSVP+ V VG AYG TAIQN GLALFPL AA + YIP VELLFV V+G G+ LNV+D + G Sbjct: 412 VPLVLQGVAYSVFAAALWPSVPYVVEAKHVGTAYGAITAIQNIGLALFPLAVAAEFN-HDDRYIPGVELLFVSFGVLGSLVGIALNVVDYQNGS 504
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|695428013|ref|XP_009529845.1| (hypothetical protein PHYSODRAFT_560629 [Phytophthora sojae] >gi|348676278|gb|EGZ16096.1| hypothetical protein PHYSODRAFT_560629 [Phytophthora sojae]) HSP 1 Score: 98.5969 bits (244), Expect = 1.576e-21 Identity = 55/94 (58.51%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 11 VPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 VPLV QG+AYS FAA LWPSVP+ V VG AYG TAIQN GLALFPL AA + YIP VELLFV V+G G+ LNV+D + G Sbjct: 381 VPLVLQGVAYSVFAAALWPSVPYVVEAKHVGTAYGAITAIQNIGLALFPLAVAAEFN-HDDRYIPGVELLFVSFGVLGSLVGIALNVVDYQNGS 473
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|1183504706|gb|ORZ28274.1| (major facilitator superfamily domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 97.0561 bits (240), Expect = 7.587e-21 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0 Query: 6 SLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 +++P + + GLAYS FA+VLWP +PF V + ++G AYGL T N L +FP++ A+I Y PHVE LF+ LA++ LA + LN+LDSR GG Sbjct: 435 TITPIIGMFILGLAYSLFASVLWPCIPFLVNDHQLGTAYGLVTIALNISLTIFPMIVASILDVTNGSY-PHVEGLFISLAIIALALSIILNILDSRHGG 532
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|953495891|emb|CEG42787.1| (major facilitator superfamily [Plasmopara halstedii]) HSP 1 Score: 95.5153 bits (236), Expect = 2.236e-20 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 11 VPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 VPL+ QG+AYS FAA LWPSVPF V VG AYG TAIQN GLALFPL A+ + + YIP VELLF ++G G+ LNV+D + G Sbjct: 413 VPLLLQGVAYSVFAAALWPSVPFVVEAKHVGTAYGAITAIQNIGLALFPLAVASEFN-HNNRYIPGVELLFASFGLLGSIVGVALNVVDFQNGS 505
BLAST of EWM22869.1 vs. NCBI_GenBank
Match: gi|669159652|ref|XP_008615388.1| (hypothetical protein SDRG_11138 [Saprolegnia diclina VS20] >gi|530732973|gb|EQC31215.1| hypothetical protein SDRG_11138 [Saprolegnia diclina VS20]) HSP 1 Score: 93.9745 bits (232), Expect = 9.053e-20 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 0 Query: 11 VPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGLAFGLWLNVLDSRGGG 104 VPLV QG+AY FAA LWPS+P+ V VG AYG T+IQN GLALFP++ A +Y ++Y+P VE+LFV +G G+ LN++D + G Sbjct: 417 VPLVLQGVAYCVFAAALWPSIPYVVDARLVGSAYGAITSIQNLGLALFPMLVAMVYSVE-NKYLPSVEMLFVAFGALGSVAGILLNIVDYKNGS 509 The following BLAST results are available for this feature:
BLAST of EWM22869.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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