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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100160g4.4648.mrna |
| Orig protein id | gnl|cribi|Naga_100160g4.4648 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002474.1 | supercontig | CM002474.1:7315..11534 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7806 ID=rna7806|Name=rna7806|organism=Nannochloropsis gaditana|type=mRNA|length=654bp
ATGCAAGCTTTCCGTATAGCTTGTTTGTGCCTGCTTCAGACATCACACCC
TTTTGCAATCATGAAAGTCTTCTCCTCCCTGCTTGTAGCGGTGGCTACAC
TGCTGTCCAATGCTGCGGCGCAAGAATACACTGGAAGTGTTTGCGTGAAG
TCACTCTCCGTCAAAGCCGGTCGTCAAGCTACCATCACGACCTCTTTCCT
CATCTCGGAACTCCCAGATACGGTGACGGAGGCGTTCTATGGGATCACGG
TAGAGCCCCTAGTAAACTCCTTATCTTGGAAGAACCACACGGCCAAGAAC
AAAACGAGCAAGTTCGCGGGCGACGTTGATGTCACTCTGCGGAAAACTCG
CATCTCCCCCAATACCTGGCGGCCCAAGACTTTCGCCAACGGTACTGGAA
CGGGCACCTCCTTCTTGCCATTGCCGCTGGACGGTCTGGTGTTGAGTAAG
CAGTACAAAATCACCTCGAAGATTCGCATTGGAAAGGGTATTCCTTCTGG
CACCTACGTTCCTTTTCTGGTCGGTGTGGAGTTGGTGGGAGGCGATTTAA
TCATTATGGAAGAGGGATACATCTACGTCAGGTGCAGTGTGTTCTTGATA
TATGTTTCTATGTGTGCGTCACGACGTCTGTGTCTAGGTGCAACTACTCG
TTAG back to topprotein sequence of rna7806 >rna7806-protein ID=rna7806-protein|Name=rna7806|organism=Nannochloropsis gaditana|type=polypeptide|length=917bp
MNQFTPPHLQHTHAPYIKGKKDGKGHKNPPLDLNSYPAEDGLKQEPSGAA
NLMPWATLKHESMLDDGFIGGIMAGGFLESGKGEGGADRGDGGGEGEGGT
PAFLQGPPSPAEMMMRGAGVGNLAMTSEGHLRYPSFQALSVGATGGQDEE
PGALERGRVPHAELTLQDPVFLESWGEEGKGKLRGQGNGAVEKQERGKAK
RRRPELNPSDPMPGAGGGQGEVESWEGTTQVPVGERKAVKGQGGGGNLFR
AQEKELREAAALEVAETRAREQRAARSRAGSEGNSVDGRSWEGGLSTLSG
GGGDNGHKGAGGGITGEGSFASSHGMLSGDGGEWGERGETWIEGGKEGRG
TSSSEGLGGSSRRGGEGGEKEGGRDGKGGRKRNLTAEEKVAQSRHRNREH
ARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTV
VHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVV
QGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSGW
KIGAGVEGDAADRDIKEEHGARAGFPPVRLEYLVNAQDIIMSKDTLMCRW
TLRTSRSRSSFPSAHVSSRPPSSRPDQPPASSMQQRHSPSSYSSSSCSPP
SPMAPLVQMERTGPGAPSPQAGKGSVGAHGEGEEAGNTSNLPVDRSNSAG
KYTGTPLQQGPRKNGRAIQGVSRSKRASQQRDSDVLDKLEFGVEGMLYCR
FNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQRAATA
RVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQPLDLLEGASEAPGSRFM
VDEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHAAPGGGRGGERGRLAP
THILGILRKVHVTEPEP back to topmRNA from alignment at CM002474.1:7315..11534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7806 ID=rna7806|Name=rna7806|organism=Nannochloropsis gaditana|type=mRNA|length=4220bp|location=Sequence derived from alignment at CM002474.1:7315..11534- (Nannochloropsis gaditana)
ACCACGTCGTTACTTGCTTTGTGCCTCATCTTCATCTACGACTAATAGAT
TTTGTTTGAATTTCTGAATATATGCTATCATACTAGGGCTGTGGTGGAAG
GGAGAGGGCTGGTATTTTCGACCACATTCACAAAGGACAGCTAGGGGCAG
CACGCCGCACTGGCTAATTATTGCGACCGTCGACCACCTAAGAGTGCGAT
TCAATTCTTCGACAGTTGTCGAAGTCTTGCAAAGCTCTTTTTTAGGTCTG
AGTGGTCGCAAAAAGGCCAGACTTTCTCCGAGTTTGACTTGACAGGAATC
CCAAGACGACCAAGGAGAGAAAATGAATCAATTCACGCCACCACACCTAC
AGCACACCCATGCACCCTACATAAAGGGGAAAAAAGACGGGAAAGGGCAC
AAAAACCCTCCACTCGACCTTAACTCCTACCCCGCAGAGGATGGACTGAA
GCAGGAGCCCTCGGGTGCGGCGAACCTGATGCCGTGGGCAACACTGAAAC
ATGAGTCCATGCTGGACGACGGGTTCATTGGAGGAATCATGGCGGGAGGA
TTCCTAGAGAGCGGGAAAGGAGAGGGGGGAGCTGACAGGGGAGACGGAGG
AGGAGAGGGAGAGGGGGGGACACCGGCCTTTCTTCAGGGGCCTCCCAGCC
CGGCAGAGATGATGATGCGCGGCGCTGGCGTGGGAAATTTGGCGATGACG
TCGGAGGGGCACTTACGGTACCCGTCGTTCCAGGCCCTGTCGGTCGGGGC
GACAGGGGGCCAGGATGAGGAACCGGGGGCACTGGAAAGGGGCCGCGTGC
CGCACGCAGAACTGACCCTCCAAGACCCTGTGTTTCTGGAATCTTGGGGG
GAAGAAGGGAAAGGAAAGCTGAGGGGGCAAGGGAATGGAGCGGTGGAGAA
ACAGGAGCGGGGCAAGGCGAAGAGGAGGCGGCCAGAGTTGAACCCGTCCG
ACCCCATGCCCGGGGCCGGGGGCGGGCAGGGGGAGGTGGAGTCATGGGAG
GGGACGACGCAGGTGCCGGTCGGGGAGAGGAAAGCCGTGAAAGGGCAGGG
AGGTGGGGGCAATCTGTTTCGCGCGCAGGAGAAGGAGTTGAGGGAGGCGG
CGGCGCTGGAAGTGGCGGAGACACGGGCTCGGGAGCAACGTGCTGCCCGG
AGCCGGGCGGGCTCGGAGGGCAACAGCGTGGACGGTCGGAGTTGGGAGGG
TGGCTTGAGCACGCTGAGTGGCGGAGGGGGTGACAATGGGCACAAGGGAG
CCGGTGGGGGAATCACGGGGGAAGGGAGCTTCGCCTCCTCGCATGGCATG
TTGTCAGGCGATGGGGGGGAATGGGGGGAGCGGGGAGAGACTTGGATTGA
GGGAGGGAAGGAAGGGCGGGGCACCAGCTCGAGTGAAGGACTGGGCGGGT
CCTCGCGGCGGGGTGGGGAAGGAGGGGAGAAGGAGGGGGGGAGGGACGGG
AAAGGGGGCCGGAAACGCAATTTGACGGCGGAGGAGAAAGTAGCTCAGTC
TCGGCATCGGAATCGGGAGCACGCCCGCAACACCCGGCTGCGGAAAAAGG
CCTACACGAAGAAATTGAAGGAGCTGGTGGACGACTTGGAGCGGCAGCGG
AAGGAGGAAGACAGGGCCAAGGACGTGCTGGCCTCCCGGGCCTTGGAGGA
GGTTCACCACCGAAACACCGTCGTCCACTCCTTCCTACACTGCCGAGCCC
GGGACGAACGCGACCGAAGGAAATGGGCCCAGGTCCTGGACGAGGACTGC
GTGCTCACGCTGCCAATCACCCCCTACCGTTTTTTCCCCCGGGGGGAGGT
GCACAACGGGGTACGCGTCGTCCAAGGCCTGGATGCCGTTATGGCGGACG
CATCCTCCCTCCGGCTCCTGATGGAGGCGGTCGGATGGTCCGCCTTGGAA
AGAGCCCACTCTCCGTCGTCCGCCCCGCCCTCCTTCGTGTCCTCCCTTAA
CGCGTCGTCGCCCTCCGGATGGAAGATCGGTGCCGGCGTCGAGGGGGACG
CCGCGGATCGAGACATCAAGGAGGAGCACGGGGCCCGCGCGGGCTTCCCG
CCTGTGCGCCTGGAATACCTGGTGAATGCCCAAGATATCATCATGTCCAA
GGATACGCTCATGTGCCGGTGGACGTTGCGGACGAGCCGATCCCGGTCGT
CCTTTCCATCCGCCCATGTGTCGTCCCGCCCACCCTCGTCGAGACCCGAC
CAACCCCCAGCGTCATCCATGCAGCAGCGTCACTCCCCCTCGTCCTACTC
CTCCTCCTCCTGTTCTCCCCCCTCCCCTATGGCTCCATTAGTTCAGATGG
AGAGAACCGGTCCCGGTGCCCCCTCCCCTCAAGCCGGCAAAGGATCTGTA
GGTGCCCACGGAGAGGGGGAGGAAGCGGGAAACACCAGTAACCTGCCTGT
GGATCGTTCGAACAGTGCCGGGAAATATACGGGCACTCCATTGCAGCAGG
GGCCACGGAAAAACGGGCGGGCCATTCAGGGTGTGTCGAGAAGCAAGAGG
GCATCGCAGCAGCGAGACAGTGACGTTCTTGACAAGCTGGAATTCGGCGT
TGAAGGGATGCTCTACTGTCGTTTCAACGAGCAGGACAAGCTGACAAGTG
TGGAGATGGTATTTGATGTGATGACGGTCATGCAGCAATTACAACGCGCC
GCTGGCATCCCTTGTGAGTACTTGATAGTCCCCAACTCCCTAGAAGGCGC
CTGCCAACGCGCAGCCACGGCGCGGGTTCTGGTCAGGGCAGAGGCACCCT
ATCCCGTGCTGCACGTGAACGAGCACTGGACTAACCTTCGGGGCCAAACC
CAAGTGGACGTGGAAGGTCAACCTTTGGACCTTCTAGAAGGCGCCAGCGA
GGCGCCGGGTTCACGGTTCATGGTGGACGAGGTGATGGGTGGCCGACCAG
CGAGCTGCATCATGCTGGTCTTTAAGGCCTGTCGTCAAGCCTTCACAGGG
TACTTGCAACTCTTCCCCCTGCATGCCGCTCCTGGAGGGGGCCGGGGGGG
CGAGCGGGGCCGTCTGGCTCCGACGCACATCCTAGGGATCCTGCGGAAAG
TACACGTGACAGAGCCGGAGCCCTAGCAGGCGCACAGGGCAGCATTACAC
TCCGCGCGGTTGGTCGAGGTGGCCTGTACGTATACGCAGACACAAATATT
TGACCAGAGAGGTAGAATTGGCCGTCAAAAAGGCTCGCGCCATACCTTTG
ATGGGTGCGTCTTCCTTGGTCGATCGTCTGTCGAGGACGAAAAGAGGGTA
CCAGGCATCGCGCCAGTCGGGGAAAGTCTATCCGGTACATGCCGACAAGC
GCACGATATATTCAGCCTCGTTATAAGTAATGCTGAATCAAATCTGTTCG
AGCAAATGATTTCAAGGTGTCCACCATGACATACGAGGCGACAAAAGAGT
GTGCTTGGGAAAGACAAACATGAGCAAGGGAAATGTCCGTGCTCTGAAGT
GAAAAGTGTCAGGTAAGACTCAACAAGTAACGACATATATTGACAGATCC
GTTGTCGCATTTGTGGATTATTCATTCGATCATCTTATAGCGGCGGTCGT
GATTATCACTCTCATTAACATCCGTCTGAAGGCCAACACAATGTACCGCA
TCTCCCGCTATTCGAGTTTATCAGCCAAAGCGTACGACATTTAGACAAGC
CATATGCAAATATCTACCTTAATAGTCTGTTGGTGACAATTATTGAAGCT
GATATTCCGGAGAGGAAAGAGGGACGGTGCGGTTTGTCTCCGTCGGTCTA
CACGCGGGTAGCTTTTACATCCCTTCCTGTATAATCACCAAGTCATATAG
AAGTCGTTGTCGGCGCTTGTCAACGTCTGTCAAGGTATACCATTTTCTCT
ATGTAGATAACAGACAGCCCCATCCATTCGTGACAATGTAGATATTGTTA
CCGCGACTTGAAATGTCACTGCAGAACCTCCTATTCTCGCGGAGTCGCGA
ACTGCACGGAGAAATGCGTCTTCAAACACCCCATCAATACTCGCTTATCT
TCACTTTCAAAAGGAACAACCTGTCAGTGTGCTTGAGCTCCGTAGGAATC
TTTGAACTGGTTTGGCGAGCATTTCCAAAGCAAACGCCAACAAGGTCTAC
GTCGAATCCAGGAAGTAACCACCAGAACCGTTACTTTTCAAGTGAAAAAT
TCAAACAAACAAAAACAGCGAAAAAAGCAAAAAAAGCAAAAAAAGCAAAA
AAAGCAAAAGGGGCGGCGAG back to topCoding sequence (CDS) from alignment at CM002474.1:7315..11534- >rna7806 ID=rna7806|Name=rna7806|organism=Nannochloropsis gaditana|type=CDS|length=2754bp|location=Sequence derived from alignment at CM002474.1:7315..11534- (Nannochloropsis gaditana)
ATGAATCAATTCACGCCACCACACCTACAGCACACCCATGCACCCTACAT
AAAGGGGAAAAAAGACGGGAAAGGGCACAAAAACCCTCCACTCGACCTTA
ACTCCTACCCCGCAGAGGATGGACTGAAGCAGGAGCCCTCGGGTGCGGCG
AACCTGATGCCGTGGGCAACACTGAAACATGAGTCCATGCTGGACGACGG
GTTCATTGGAGGAATCATGGCGGGAGGATTCCTAGAGAGCGGGAAAGGAG
AGGGGGGAGCTGACAGGGGAGACGGAGGAGGAGAGGGAGAGGGGGGGACA
CCGGCCTTTCTTCAGGGGCCTCCCAGCCCGGCAGAGATGATGATGCGCGG
CGCTGGCGTGGGAAATTTGGCGATGACGTCGGAGGGGCACTTACGGTACC
CGTCGTTCCAGGCCCTGTCGGTCGGGGCGACAGGGGGCCAGGATGAGGAA
CCGGGGGCACTGGAAAGGGGCCGCGTGCCGCACGCAGAACTGACCCTCCA
AGACCCTGTGTTTCTGGAATCTTGGGGGGAAGAAGGGAAAGGAAAGCTGA
GGGGGCAAGGGAATGGAGCGGTGGAGAAACAGGAGCGGGGCAAGGCGAAG
AGGAGGCGGCCAGAGTTGAACCCGTCCGACCCCATGCCCGGGGCCGGGGG
CGGGCAGGGGGAGGTGGAGTCATGGGAGGGGACGACGCAGGTGCCGGTCG
GGGAGAGGAAAGCCGTGAAAGGGCAGGGAGGTGGGGGCAATCTGTTTCGC
GCGCAGGAGAAGGAGTTGAGGGAGGCGGCGGCGCTGGAAGTGGCGGAGAC
ACGGGCTCGGGAGCAACGTGCTGCCCGGAGCCGGGCGGGCTCGGAGGGCA
ACAGCGTGGACGGTCGGAGTTGGGAGGGTGGCTTGAGCACGCTGAGTGGC
GGAGGGGGTGACAATGGGCACAAGGGAGCCGGTGGGGGAATCACGGGGGA
AGGGAGCTTCGCCTCCTCGCATGGCATGTTGTCAGGCGATGGGGGGGAAT
GGGGGGAGCGGGGAGAGACTTGGATTGAGGGAGGGAAGGAAGGGCGGGGC
ACCAGCTCGAGTGAAGGACTGGGCGGGTCCTCGCGGCGGGGTGGGGAAGG
AGGGGAGAAGGAGGGGGGGAGGGACGGGAAAGGGGGCCGGAAACGCAATT
TGACGGCGGAGGAGAAAGTAGCTCAGTCTCGGCATCGGAATCGGGAGCAC
GCCCGCAACACCCGGCTGCGGAAAAAGGCCTACACGAAGAAATTGAAGGA
GCTGGTGGACGACTTGGAGCGGCAGCGGAAGGAGGAAGACAGGGCCAAGG
ACGTGCTGGCCTCCCGGGCCTTGGAGGAGGTTCACCACCGAAACACCGTC
GTCCACTCCTTCCTACACTGCCGAGCCCGGGACGAACGCGACCGAAGGAA
ATGGGCCCAGGTCCTGGACGAGGACTGCGTGCTCACGCTGCCAATCACCC
CCTACCGTTTTTTCCCCCGGGGGGAGGTGCACAACGGGGTACGCGTCGTC
CAAGGCCTGGATGCCGTTATGGCGGACGCATCCTCCCTCCGGCTCCTGAT
GGAGGCGGTCGGATGGTCCGCCTTGGAAAGAGCCCACTCTCCGTCGTCCG
CCCCGCCCTCCTTCGTGTCCTCCCTTAACGCGTCGTCGCCCTCCGGATGG
AAGATCGGTGCCGGCGTCGAGGGGGACGCCGCGGATCGAGACATCAAGGA
GGAGCACGGGGCCCGCGCGGGCTTCCCGCCTGTGCGCCTGGAATACCTGG
TGAATGCCCAAGATATCATCATGTCCAAGGATACGCTCATGTGCCGGTGG
ACGTTGCGGACGAGCCGATCCCGGTCGTCCTTTCCATCCGCCCATGTGTC
GTCCCGCCCACCCTCGTCGAGACCCGACCAACCCCCAGCGTCATCCATGC
AGCAGCGTCACTCCCCCTCGTCCTACTCCTCCTCCTCCTGTTCTCCCCCC
TCCCCTATGGCTCCATTAGTTCAGATGGAGAGAACCGGTCCCGGTGCCCC
CTCCCCTCAAGCCGGCAAAGGATCTGTAGGTGCCCACGGAGAGGGGGAGG
AAGCGGGAAACACCAGTAACCTGCCTGTGGATCGTTCGAACAGTGCCGGG
AAATATACGGGCACTCCATTGCAGCAGGGGCCACGGAAAAACGGGCGGGC
CATTCAGGGTGTGTCGAGAAGCAAGAGGGCATCGCAGCAGCGAGACAGTG
ACGTTCTTGACAAGCTGGAATTCGGCGTTGAAGGGATGCTCTACTGTCGT
TTCAACGAGCAGGACAAGCTGACAAGTGTGGAGATGGTATTTGATGTGAT
GACGGTCATGCAGCAATTACAACGCGCCGCTGGCATCCCTTGTGAGTACT
TGATAGTCCCCAACTCCCTAGAAGGCGCCTGCCAACGCGCAGCCACGGCG
CGGGTTCTGGTCAGGGCAGAGGCACCCTATCCCGTGCTGCACGTGAACGA
GCACTGGACTAACCTTCGGGGCCAAACCCAAGTGGACGTGGAAGGTCAAC
CTTTGGACCTTCTAGAAGGCGCCAGCGAGGCGCCGGGTTCACGGTTCATG
GTGGACGAGGTGATGGGTGGCCGACCAGCGAGCTGCATCATGCTGGTCTT
TAAGGCCTGTCGTCAAGCCTTCACAGGGTACTTGCAACTCTTCCCCCTGC
ATGCCGCTCCTGGAGGGGGCCGGGGGGGCGAGCGGGGCCGTCTGGCTCCG
ACGCACATCCTAGGGATCCTGCGGAAAGTACACGTGACAGAGCCGGAGCC
CTAG back to top
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