EWM22888.1, cds7785 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|585103546|gb|EWM22888.1| (hypothetical protein Naga_100160g4 [Nannochloropsis gaditana]) HSP 1 Score: 1860.11 bits (4817), Expect = 0.000e+0 Identity = 917/917 (100.00%), Postives = 917/917 (100.00%), Query Frame = 0 Query: 1 MNQFTPPHLQHTHAPYIKGKKDGKGHKNPPLDLNSYPAEDGLKQEPSGAANLMPWATLKHESMLDDGFIGGIMAGGFLESGKGEGGADRGDGGGEGEGGTPAFLQGPPSPAEMMMRGAGVGNLAMTSEGHLRYPSFQALSVGATGGQDEEPGALERGRVPHAELTLQDPVFLESWGEEGKGKLRGQGNGAVEKQERGKAKRRRPELNPSDPMPGAGGGQGEVESWEGTTQVPVGERKAVKGQGGGGNLFRAQEKELREAAALEVAETRAREQRAARSRAGSEGNSVDGRSWEGGLSTLSGGGGDNGHKGAGGGITGEGSFASSHGMLSGDGGEWGERGETWIEGGKEGRGTSSSEGLGGSSRRGGEGGEKEGGRDGKGGRKRNLTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSGWKIGAGVEGDAADRDIKEEHGARAGFPPVRLEYLVNAQDIIMSKDTLMCRWTLRTSRSRSSFPSAHVSSRPPSSRPDQPPASSMQQRHSPSSYSSSSCSPPSPMAPLVQMERTGPGAPSPQAGKGSVGAHGEGEEAGNTSNLPVDRSNSAGKYTGTPLQQGPRKNGRAIQGVSRSKRASQQRDSDVLDKLEFGVEGMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQRAATARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQPLDLLEGASEAPGSRFMVDEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHAAPGGGRGGERGRLAPTHILGILRKVHVTEPEP 917 MNQFTPPHLQHTHAPYIKGKKDGKGHKNPPLDLNSYPAEDGLKQEPSGAANLMPWATLKHESMLDDGFIGGIMAGGFLESGKGEGGADRGDGGGEGEGGTPAFLQGPPSPAEMMMRGAGVGNLAMTSEGHLRYPSFQALSVGATGGQDEEPGALERGRVPHAELTLQDPVFLESWGEEGKGKLRGQGNGAVEKQERGKAKRRRPELNPSDPMPGAGGGQGEVESWEGTTQVPVGERKAVKGQGGGGNLFRAQEKELREAAALEVAETRAREQRAARSRAGSEGNSVDGRSWEGGLSTLSGGGGDNGHKGAGGGITGEGSFASSHGMLSGDGGEWGERGETWIEGGKEGRGTSSSEGLGGSSRRGGEGGEKEGGRDGKGGRKRNLTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSGWKIGAGVEGDAADRDIKEEHGARAGFPPVRLEYLVNAQDIIMSKDTLMCRWTLRTSRSRSSFPSAHVSSRPPSSRPDQPPASSMQQRHSPSSYSSSSCSPPSPMAPLVQMERTGPGAPSPQAGKGSVGAHGEGEEAGNTSNLPVDRSNSAGKYTGTPLQQGPRKNGRAIQGVSRSKRASQQRDSDVLDKLEFGVEGMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQRAATARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQPLDLLEGASEAPGSRFMVDEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHAAPGGGRGGERGRLAPTHILGILRKVHVTEPEP Sbjct: 1 MNQFTPPHLQHTHAPYIKGKKDGKGHKNPPLDLNSYPAEDGLKQEPSGAANLMPWATLKHESMLDDGFIGGIMAGGFLESGKGEGGADRGDGGGEGEGGTPAFLQGPPSPAEMMMRGAGVGNLAMTSEGHLRYPSFQALSVGATGGQDEEPGALERGRVPHAELTLQDPVFLESWGEEGKGKLRGQGNGAVEKQERGKAKRRRPELNPSDPMPGAGGGQGEVESWEGTTQVPVGERKAVKGQGGGGNLFRAQEKELREAAALEVAETRAREQRAARSRAGSEGNSVDGRSWEGGLSTLSGGGGDNGHKGAGGGITGEGSFASSHGMLSGDGGEWGERGETWIEGGKEGRGTSSSEGLGGSSRRGGEGGEKEGGRDGKGGRKRNLTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSGWKIGAGVEGDAADRDIKEEHGARAGFPPVRLEYLVNAQDIIMSKDTLMCRWTLRTSRSRSSFPSAHVSSRPPSSRPDQPPASSMQQRHSPSSYSSSSCSPPSPMAPLVQMERTGPGAPSPQAGKGSVGAHGEGEEAGNTSNLPVDRSNSAGKYTGTPLQQGPRKNGRAIQGVSRSKRASQQRDSDVLDKLEFGVEGMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQRAATARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQPLDLLEGASEAPGSRFMVDEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHAAPGGGRGGERGRLAPTHILGILRKVHVTEPEP 917
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|553189656|ref|XP_005855046.1| (hypothetical protein NGA_2048610, partial [Nannochloropsis gaditana CCMP526] >gi|422294013|gb|EKU21313.1| hypothetical protein NGA_2048610, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 207.994 bits (528), Expect = 1.263e-59 Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0 Query: 402 RNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQG 502 RNTRLRKKAYTKKLKELVDDLERQR+EEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVH GVRVVQG Sbjct: 1 RNTRLRKKAYTKKLKELVDDLERQREEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHKGVRVVQG 101
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|553179972|ref|XP_005852796.1| (hypothetical protein NGA_2048620, partial [Nannochloropsis gaditana CCMP526] >gi|422295737|gb|EKU23036.1| hypothetical protein NGA_2048620, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 204.142 bits (518), Expect = 2.650e-58 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0 Query: 404 TRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQG 502 TRLRKKAYTKKLKELVDDLERQR+EEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVH GVRVVQG Sbjct: 1 TRLRKKAYTKKLKELVDDLERQREEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHKGVRVVQG 99
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|1072239025|gb|OEU23752.1| (basic leucine zipper domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 138.658 bits (348), Expect = 1.160e-29 Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 0 Query: 373 GRDGKGGRKR--NLTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVG-----WSALER 527 G GG+KR +LTA+E+ Q+R RNREHAR+TRLRKKAY KLKELV+ L +R EE R + V E R VV SFL ++ E D+RKW +L++D L P+TPYR F R E+ N R +G + ++ADASS+ +++E VG W+ ++R Sbjct: 274 GATTAGGKKRTKDLTAQERAQQNRDRNREHARSTRLRKKAYVSKLKELVEGLHAERTEEVRQRRVAIQHLAETQDVRRAVVRSFLRFQSSYETDKRKWMTLLEDDFWLKQPVTPYRCFRRSEIKNESRFTRGAEGMIADASSIAVMIEGVGSRSSRWAHIKR 435 HSP 2 Score: 82.0333 bits (201), Expect = 4.039e-12 Identity = 58/183 (31.69%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 740 EFGVEGMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQRAAT-ARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQPLDLLEG-------ASEAPGSRFMVDEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHAAPGGGRGGERGRLAPTHILGILRKVHVTE 914 E + GML F+ ++KL ++EMV+D M +MQQL+R +G I+P SLE A A RV+ E PY +++VN+ WT L TQ+DVEG L + G +S+A + + +V GR F + F ++ +PL A + THIL + +++ E Sbjct: 845 ECVMPGMLRGEFSSRNKLHNLEMVYDSMGLMQQLERCSGSELMAQIIPGSLEMALSPAPYECRVITLVEPPYLIVNVNKSWTKLTKHTQMDVEGAELFNILGSSSNSSESSQAANPPYDLKDVSEGRSKCTTRFHFDKDGREFVDFMCSYPLTNA----------KDEVTHILHVSKELRSLE 1017
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|224008160|ref|XP_002293039.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971165|gb|EED89500.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 130.568 bits (327), Expect = 3.249e-27 Identity = 65/146 (44.52%), Postives = 93/146 (63.70%), Query Frame = 0 Query: 384 LTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAH 529 +TA++K +R RNREHAR TRLRKKAY KLKELVD L+ +R E+ R + V E R V+H+FL A+ E D KW +L+ED L P+TPYR F R E+ G R+++G++A++ DA+S+ +++E +G L H Sbjct: 324 VTAQQKAQSNRDRNREHARCTRLRKKAYVSKLKELVDGLQAERSEDSRKRRVAVQHLAEIQDIRRKVMHTFLGYHAKFEGDVGKWKTILEEDFWLKQPVTPYRSFRRTEIDKGSRILKGVNAMIGDAASMSVMIETIGSRNLRWLH 469 HSP 2 Score: 96.6709 bits (239), Expect = 1.044e-16 Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 0 Query: 740 EFGVEGMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQ-RAATARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQPLDLLEGASEAPG----SRFMVDE---VMGGRPASCIMLVFKACRQAFTGYLQLFPL 883 E + GML F+ +KL +VEM+FD M QQL+RA+G I+PNSLE A + ARV+ A+APYP++ VNE WT + G TQ+D EG+ L +L G P S F + V G+ A + + + + F ++ +PL Sbjct: 850 ECVMPGMLRASFSATNKLKNVEMIFDAMGFCQQLERASGNEGMAQIIPNSLEMALTPNSEEARVITLAQAPYPIVSVNESWTRITGFTQLDAEGKDLSILHGERTDPDAGRRSGFPAHDMASVSQGQCACSVNVHYDINGREFLNFMSSYPL 1001
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|585102813|gb|EWM22316.1| (hypothetical protein Naga_100118g9 [Nannochloropsis gaditana]) HSP 1 Score: 125.176 bits (313), Expect = 5.601e-26 Identity = 74/216 (34.26%), Postives = 108/216 (50.00%), Query Frame = 0 Query: 390 VAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSGWKIGAGVEGDAADRDIKEEHGARAGFPPVRLEYLVNAQDIIM-SKDTLMCRWTLRT 604 V + RNREHARNTRLRKKAY + L+ + L + +ED+ + V R+LE + + +FL RAR E DRRKWA +L ED VL LP+TPYR+FP G+V R V+G+DA + D +S +L++++ + ER VR+++ A I++ + TLMCRWT+R+ Sbjct: 256 VDSQKLRNREHARNTRLRKKAYIETLRHQLQSLSDAKDKEDKTELVSHVRSLEGRKLKKARLQTFLLYRARGELDRRKWAVLLAEDFVLKLPLTPYRYFPAGDVEQHARYVRGIDATIRDTASFTVLIDSLSRTYRER--------------------------------------------------VRVQFYSEADYIVIGTGPTLMCRWTMRS 421
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|219116773|ref|XP_002179181.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409072|gb|EEC49004.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 125.561 bits (314), Expect = 9.527e-26 Identity = 66/152 (43.42%), Postives = 98/152 (64.47%), Query Frame = 0 Query: 381 KRNLTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVG-----WSALER 527 K +LT+EE+ Q+R RNREHAR+TRLRKKAY +KL+ELV+ L +R EE R + V E+ + R VV +FL + E D RKW +L++D L P+TPYR FPR E+ R+ +G+D+++ D +SL +++E +G W ++R Sbjct: 190 KGDLTSEERAQQNRDRNREHARSTRLRKKAYVQKLRELVEGLHSERTEEVRRRRVAIQHLAEKQNVRKKVVRNFLQYGSNYETDERKWGTILEDDFYLKQPVTPYRSFPRAEIEKECRISRGIDSIINDGASLSVMVEGIGSRSTRWMQMKR 341 HSP 2 Score: 87.0409 bits (214), Expect = 8.982e-14 Identity = 57/153 (37.25%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 740 EFGVEGMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQRAAT-ARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQP-LDLL-------EGASEAPGSRFMVDEVMGGRPASCIMLVFKACRQAFTGYLQLFPL 883 E + GML F+ ++KL SVEMV+D M MQ L+RA+G + I+P SLE A T ARV+ AEAP+ +++VN +T G TQ++ EG+ L LL E A ++EV GR A + + Q F Y+ +PL Sbjct: 689 ECVMPGMLRAHFSPRNKLVSVEMVYDAMGFMQLLERASGNEGTFQIIPGSLEMALAPINTEARVITLAEAPFLIVNVNAEFTKTTGYTQLEAEGKEYLSLLGGEGTIPEACERANKPVHKLEEVANGRCACSTNIHYDRDGQDFIEYVCSYPL 841
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|553192250|ref|XP_005855540.1| (hypothetical protein NGA_2008900, partial [Nannochloropsis gaditana CCMP526] >gi|422293519|gb|EKU20819.1| hypothetical protein NGA_2008900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 120.168 bits (300), Expect = 2.026e-25 Identity = 74/216 (34.26%), Postives = 108/216 (50.00%), Query Frame = 0 Query: 390 VAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSGWKIGAGVEGDAADRDIKEEHGARAGFPPVRLEYLVNAQDIIM-SKDTLMCRWTLRT 604 V + RNREHARNTRLRKKAY + L+ + L + +ED+ + V R+LE + + +FL RAR E DRRKWA +L ED VL LP+TPYR+FP G+V R V+G+DA + D +S +L++++ + ER VR+++ A I++ + TLMCRWT+R+ Sbjct: 16 VDSQKLRNREHARNTRLRKKAYIETLRHQLQSLSDAKDKEDKTELVSHVRSLEGRKLKKARLQTFLLYRARGELDRRKWAVLLAEDFVLKLPLTPYRYFPAGDVEQHARYVRGIDATIRDTASFTVLIDSLSRTYRER--------------------------------------------------VRVQFYSEADYIVIGTGPTLMCRWTMRS 181
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|298711945|emb|CBJ48632.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.013 bits (297), Expect = 1.184e-24 Identity = 73/173 (42.20%), Postives = 103/173 (59.54%), Query Frame = 0 Query: 380 RKRN-LTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLE--RQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSG 549 RKR L+ EE+ Q+R RNREHARNTRLRKKA+ ++LK+ V++L R+R+E D+ + +L E+ R V+ +FL R R E R++W VLDE + +PITPYR FP +V G RV++GLD V+AD SL + + S + + A PS +S P G Sbjct: 33 RKRAVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREREEMDQRAEARRVASLREI--RLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSLSVATKGPSPSGRQSSREERPASPSPTASSRGGCPQG 203
BLAST of EWM22888.1 vs. NCBI_GenBank
Match: gi|1210517566|dbj|GAX23481.1| (hypothetical protein FisN_14Hh349 [Fistulifera solaris]) HSP 1 Score: 119.013 bits (297), Expect = 7.046e-24 Identity = 62/150 (41.33%), Postives = 90/150 (60.00%), Query Frame = 0 Query: 383 NLTAEEKVAQSRHRNREHARNTRLRKKAYTKKLKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVG-----WSALER 527 ++ EKV Q+R RNREHAR+TRLRKKAY +KLKELV+ L +R EE R + V E + R VV FL + E D RKW + +++ L P+TPYR F R E+ R +G+ A++ +A+SL +++E +G W ++R Sbjct: 110 DVLTTEKVQQNRDRNREHARSTRLRKKAYVQKLKELVEGLHAERIEEVRQRRVAIQHMAEVQNVRRNVVRDFLRFLTKFETDERKWKTLAEDNFCLKQPVTPYRSFRRCEIEKECRCSRGVQAMICEAASLSVMIENIGSRSSRWMQIKR 259 HSP 2 Score: 93.5893 bits (231), Expect = 7.553e-16 Identity = 58/148 (39.19%), Postives = 86/148 (58.11%), Query Frame = 0 Query: 745 GMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQ-RAATARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQP-LDLLEG------ASEAPGS-RFMVDEVMGGRPASCIMLVFKACRQAFTGYLQLFPL 883 GML F+ ++KL+S+E+V+D M MQQL+RA+G I+P SLE A ARV+ AE P+ +++VNE WT + G TQ++VEG+ + LLEG A PG +++EV GRPA + + Q F ++ +PL Sbjct: 551 GMLRASFSSRNKLSSIEIVYDAMGFMQQLERASGNEGSAQIIPGSLEMALAPTQLEARVITLAEPPFKIVNVNEAWTRITGYTQMEVEGKEYISLLEGEGTVQEAKVRPGKPHHLLEEVAMGRPACSTNIHYGKDGQDFIEFVCSYPL 698 The following BLAST results are available for this feature:
BLAST of EWM22888.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|