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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100784g2.6248.mrna |
| Orig protein id | gnl|cribi|Naga_100784g2.6248 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:395644..397129 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7792 ID=rna7792|Name=rna7792|organism=Nannochloropsis gaditana|type=mRNA|length=1257bp
CTTAGTCCATACAGGCACCTATAAAGCCACAACAACATTGATCGTTCGCT
GTTCATCAAGCATGGCCTGAATCAATCTTATCCCGCGGCTGGAATAGGCT
GGGCCGGAGGGACTGACACAAATGAGAGATGATCGAGAGGACTCTTGATC
GGATCAAGCTACACAAAGGAGGGCAGCACCGTCGGAAAACAATGTCTTTC
CCGAGATCAAGATACCCTTCCATACATCGTACTGACCACGCTTATAGACA
AACGTGGCACATACATCCAACATGCAGACGGGCGCGGCACCAAGAAAAAA
GGTGTTCAAGAGCGGGAAAGCGGGGAAAAAACCAAGATCAACAAGGGGCA
GGCGGCCTTCTGTTACTAACGTGCGTGCGAATAAAGCGAAGGTCAAGCAG
TCGCCTCGCCTTATGTTCATTTTGGGCGTCAACGGACCACGCCGTGGATC
CAAAAGCTTTTCGCTGTGGAAATATGTCACCTTCGAGATGCCACGACTGG
CGGCTGGGCGGACGACTGCCTTTGGGGAAAGAGGGTGGTGAGGCGAGAAA
GCGTCGAGGAGAGGTCTGAGTATCGTGTGAAGACGATACCCTTCTCGGGC
CCCTGAAACCCCAAAAATGGTCTTTGCAACCTGCTTGACTGGTTTTGCCC
CATGCAAATCATAAGTTGCTGCTCTCTTGAATCCTTTTAGTACACTGGAC
CGCGTGAGGGCTTTGATTCTTAATAGTATATTTTTGGGAGGACAGTATTA
TAGATGTAGGCAGGCTTTCCCTAGCGGTGTTTCTCAGATGCCAGCAGTGC
CGACGGCGATGCACGAGGAGAACCATTACCTTTTGGTCAATACACTTGTC
AGGAGCATTGAGGCACGCAAATACGGCGCACATGATTTTGCGCTATTCGT
CTTGAACAACTTCTTGGTATTTTTCAGTAGCTGAACTTTCATGAGAAGCT
GAGCTTTTTGTAGGATTTACGGTACAGAAGAGGGAAATTTACATGGCAAA
AATATTCTACTTCCAGGAAGAATACGCCCGTATTACTGCAACTTTGAAGA
ATGCTTTTATCACTCGTAAAGTCAGTTATAGGGAGAATTGTATTTGCCAA
ACCAATCTCAGGCCTTTTTTTAAATGTACCTTGTAGCCCCTTGCAGAATG
CGTTAGCTCGCGCGCTGATAATGGGTAAGCAAGCGCAGAAAAGGAAAGCT
AAAGAAATTGCATTTACTTTTAATTCTGTGTATTGTTACTTTTACCGTTG
CCTTCGT back to topprotein sequence of rna7792 >rna7792-protein ID=rna7792-protein|Name=rna7792|organism=Nannochloropsis gaditana|type=polypeptide|length=291bp
PLYCLSRCLSSAFPPCSGLLFPPCVFFGPIPRSGFSLPLPLSSPPLSRPP
PLPPSHPASFLAIGCFRPLPPTCRPLCAVSLMSLPCHPDRPSSFLFPLLS
PIVQDDERRRKDVQTFFALRVRDPRAILISALPSSLPLSLFPLSFLCVSP
TFPVPACPPSPSSPPTIALFSLSFRPQCFKPTSYPPSLPPSLSLSRQMPS
PPFPPGPGEIGLRLIWRSFGRIIVGSWRNTCQRNWYGSFSLFSSLFPPLP
SPVITMILAAKGPELTEMEDLLHVFPCHTSYFVWSVRVMRS back to topmRNA from alignment at CM002473.1:395644..397129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7792 ID=rna7792|Name=rna7792|organism=Nannochloropsis gaditana|type=mRNA|length=1486bp|location=Sequence derived from alignment at CM002473.1:395644..397129+ (Nannochloropsis gaditana)
TCCACTTTATTGTCTGTCTCGCTGCCTCTCCTCtgcgtttcctccttgtt
cAGGGCTCCTGTTCCCTCCTTGTGTCTTTTTCGGTCCTATTCCGCGCAGt
ggcttctcccttcccttgcctctctcttctcctccactttcccgccctcc
tcccctccctccctcgcaccctgcctccttcctcgctatCGGGTGTTTTC
GTCCTCTACCACCAACTTGCCGTCCTCTGTGTGCAGTTTCACTCATGAGC
CTTCCTTGTCACCCCgaccgcccctcttcctttctctttccccttctttc
ccccatcGTCCAGGATGacgagcggaggaggaaagacgtcCAAACCTTCT
TCGCTTTGAGGGTACGCGATCCTCGCGCAATACTtatctccgccctccct
tcctctcttcctctttctctctttcctttatCTTTCTTATGTGTCTCTCC
TACTTTTCCTGTACCTgcatgtcctccttccccctcttcccctcctacAA
TAGcacttttttccctctcgttCAGACCACAATGCTTTAAACCtacctcc
taccctccctccctccctccctccctctctctctccaggCAGatgccctc
gcctcccttcccgcctgggCCGGGCGAGATCGGCCTCCGGTTGATTTGGA
GAAGCTTTGGCCGCATTATCGTGGGATCGTGGCGAAATACCTGCCAGAGA
AATTGGTATGGTagtttttcccttttttcctccctctttcctccccttcc
ttcccccgtcatAACCATGATTCTTGCTGCTAAAGGACCTGAGCTGACGG
AGATGGAAGATCTTCTGCATGTTTTTCCGTGTCACACGTCTTATTTCGTG
TGGAGTGTCAGGGTGATGAGGTCGTGACTTGGAATACATAGCGGGGACGG
ATGTGTtgatgaaagaagaaggaaaagcggaGACTAGatgaggagagaaa
gagatcGCGCGGGCAACTTTTTACgagagacagagaaggcgaggagtCGA
CAGGGAccaaaaaggaaggagcacCGCGGTGTGgtttgaaaaaaaagaaa
atcgACTTTTAAAagaatgaagaggaggggatatttcaaggaaggagggc
aaaggaccTAGATGAACGGAAAATCATGCGATCCACCTCGTTTACAATCA
TACGTCATGCGGTCTGTCTGAATCTGATTGAACCAGAGCTGATTAAGAAG
ATATTGGTGTATTTCTACGGCATGCGACTATAGCGTCAGATGAGAAGTGA
TCTCGCAGAAGAGGCGAGGAATGCAATGTACATAGATTGGATAGCTTAAG
ACTTTAAAGAGGGGTCGCAGATATGGAAGAATGATTGCAGTGTTTCAAAA
AAGGAAACTCTGGCGATAtatgtggagggagaaatttTCAGAGCagggat
gacgaggaaggcctgTCACTTCTAAGGCAATGTACGCATATTCAAAACCT
TAAACGAATTAATAAATATCTACACCTGAGTTAACG back to topCoding sequence (CDS) from alignment at CM002473.1:395644..397129+ >rna7792 ID=rna7792|Name=rna7792|organism=Nannochloropsis gaditana|type=CDS|length=876bp|location=Sequence derived from alignment at CM002473.1:395644..397129+ (Nannochloropsis gaditana)
CCACTTTATTGTCTGTCTCGCTGCCTCTCCTCtgcgtttcctccttgttc
AGGGCTCCTGTTCCCTCCTTGTGTCTTTTTCGGTCCTATTCCGCGCAGtg
gcttctcccttcccttgcctctctcttctcctccactttcccgccctcct
cccctccctccctcgcaccctgcctccttcctcgctatCGGGTGTTTTCG
TCCTCTACCACCAACTTGCCGTCCTCTGTGTGCAGTTTCACTCATGAGCC
TTCCTTGTCACCCCgaccgcccctcttcctttctctttccccttctttcc
cccatcGTCCAGGATGacgagcggaggaggaaagacgtcCAAACCTTCTT
CGCTTTGAGGGTACGCGATCCTCGCGCAATACTtatctccgccctccctt
cctctcttcctctttctctctttcctttatCTTTCTTATGTGTCTCTCCT
ACTTTTCCTGTACCTgcatgtcctccttccccctcttcccctcctacAAT
AGcacttttttccctctcgttCAGACCACAATGCTTTAAACCtacctcct
accctccctccctccctccctccctctctctctccaggCAGatgccctcg
cctcccttcccgcctgggCCGGGCGAGATCGGCCTCCGGTTGATTTGGAG
AAGCTTTGGCCGCATTATCGTGGGATCGTGGCGAAATACCTGCCAGAGAA
ATTGGTATGGTagtttttcccttttttcctccctctttcctccccttcct
tcccccgtcatAACCATGATTCTTGCTGCTAAAGGACCTGAGCTGACGGA
GATGGAAGATCTTCTGCATGTTTTTCCGTGTCACACGTCTTATTTCGTGT
GGAGTGTCAGGGTGATGAGGTCGTGA back to top
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