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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100625g2.4759.mrna |
| Orig protein id | gnl|cribi|Naga_100625g2.4759 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:378224..379913 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7785 ID=rna7785|Name=rna7785|organism=Nannochloropsis gaditana|type=mRNA|length=373bp
CATGACTCGCATATTCATGGTAACAATAAGTCTGGTCCAATTCCTTCTCG
GCTCCCTCTTTCTTGTCATGCTGATGTACGATTTGGACGTTCTTAAACCC
TCGCCACGGCCCTCAGAGAGACTTTACTCTGAGGATGGTGAAGTCCACTT
CGTACCAACACCTTCCGGATTCATTTGTCGTACATTGGGACGAGAGTCTA
TCATCGGTGCTGAAGACATCGTGACGCTCACCCCTTCCCTTTTCATCACG
GGCACCGACGACCGTCTCCGCTTATGGGAAAACCCCGACTTCGGCCCGAC
CCGGACTCCACAGGTATGGTTCGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGAGGAGGAGGG back to topprotein sequence of rna7785 >rna7785-protein ID=rna7785-protein|Name=rna7785|organism=Nannochloropsis gaditana|type=polypeptide|length=137bp
MKLSIPSLFLACAVFTLGKGTVNAGSMRGAEKKVNGEKLKMLIDCFASYM
EDASYRADNSKRDGCTDAEILYCRTDSGYNDHFCRFDGTNNLIDMGEIPL
LGPQDAVPECWFNCQMETCNAWEFPHNEEQEKCVAAL back to topmRNA from alignment at CM002473.1:378224..379913+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7785 ID=rna7785|Name=rna7785|organism=Nannochloropsis gaditana|type=mRNA|length=1690bp|location=Sequence derived from alignment at CM002473.1:378224..379913+ (Nannochloropsis gaditana)
ACAAGCACAGGCACTTTAAAGCGTTCATATCTACATAAGCATGAAGCTGT
CCATCCCTTCGCTTTTCCTGGCCTGTGCCGTCTTTACTTTAGGTAAAGGA
ACTGTCAATGCTGGCAGCATGCGTGGTGCAGAAAAGAAAGGTAAGGAAAG
CCATGTACACATCTTGAAGAGCAAATAATGACTGCACTTTATGGACGTCC
CTTGTCGAACTATCGCATCGCTTTTTTGCATTTCATCTTGTACCTTTAAA
GAAGCATGAGAATGCGTTCTCGGAATGACCTCCCACTGTGACAGAGAGAA
CCGTCCCAATCCTGCTATCTCAAACCGTCCTCAATACTTTTTGCTCACAT
ACATACCTGAACATTTGTACAATGTCCTTCGTATTTCCCTTTTCATCTCT
CTTATCAACATACGCTAATCAAAGTGAACGGTGAGAAATTAAAGATGCTG
ATTGACTGCTTCGCCAGGTAGGTTacgagaggaaaaaggcggagcgaagg
gagggaggatggaaaggagtAAGCGCCACACACAATTTGAGGAGTGAGAG
GTCGAATACCATGTTTGCGCCCAGGTACCTCAaacttccctctccctccc
ctcctctccccttccatccctcccttgctttcCAGTTATATGGAGGACGC
CTCCTACCGAGCTGATAACAGCAAACGGGATGGGTGCACCGACGCTGAGA
TCCTCTACTGCCGTACAGACaggtgaaaagggaggagggaggattgtGTG
AGGGAGAAATAGTTGGATGATTGAAGGGGTTCTGCTTGTCAATCTGTAAT
TGACTGCCGGTCCTTTAAAAGGACAGCAGGGGGATATAAGGTAGTAGAAG
GAtaagagaaggaagaatggaaggcaaggagggagggagggaaggagggg
gggtcaGGTTGTACGTGTCCCTCGAACATGCACGCCGAGCACGCCTCTCA
ATCAGGCGGTCGCGCCCTACcctatccctctctcctttcctcccactcaG
CGGCTACAACGACCACTTCTGCCGCTTTGACGGGACCAACAACCTCATTG
ACATGGGCGAGATCCCCCTTTTGGGGCCACAGGACGCGGTTCCCGAATGT
TGGTTCAATTGCCaggtgaaaagggagggagaggatgtaCAGCTATGCCC
ATCatgtttctccttttttgCGCTGCATCCTTCTCGTTTCTCTTCTGTTT
TCTCTCGCTTTTGTCTTTCTTTGCCCGTCTGTTCGCTCCACCCCCTGAAC
TGGCACGCCTCTCAAggccatcctctttcccccttctcttcttttcctcg
ttcTTTTCCTTGGCGCCCTGTACCTCATTCCTCTTTTGACCCATTCCTGA
GgcctcactccctctctcttccttgtcctgccAGATGGAGACTTGCAACG
CATGGGAATTTCCCCACAACGAGGAGCAAGAAAAATGCGTGGCTGCTCTT
TAAGGGCGGAGGCTTCTTTGGCAAACAGCAAAAGGCGCGTGCCGTGGTTC
CACTTATGAGGTTTTTAGAGTGTTAGAGTGAAGTCTTCTTTTAAGGGGAA
TGGGTCGCGCTCGATTGTCTTGGTCCGAGACGATCTTCCCTTAAAGGAGC
AAATGAAAAAAGGTATACGCTGACAAAGATTTCAGCTGGCAATGCTCGAA
AGCATATCAAAGAAAGGCAAAACCTAAAGCATGACTAAGA back to topCoding sequence (CDS) from alignment at CM002473.1:378224..379913+ >rna7785 ID=rna7785|Name=rna7785|organism=Nannochloropsis gaditana|type=CDS|length=2070bp|location=Sequence derived from alignment at CM002473.1:378224..379913+ (Nannochloropsis gaditana)
ATGAAGCTGTCCATCCCTTCGCTTTTCCTGGCCTGTGCCGTCTTTACTTT
AGGTAAAGGAACTGTCAATGCTGGCAGCATGCGTGGTGCAGAAAAGAAAG
TGAACGGTGAGAAATTAAAGATGCTGATTGACTGCTTCGCCAGTTATATG
GAGGACGCCTCCTACCGAGCTGATAACAGCAAACGGGATGGGTGCACCGA
CGCTGAGATCCTCTACTGCCGTACAGACagCGGCTACAACGACCACTTCT
GCCGCTTTGACGGGACCAACAACCTCATTGACATGGGCGAGATCCCCCTT
TTGGGGCCACAGGACGCGGTTCCCGAATGTTGGTTCAATTGCCagATGGA
GACTTGCAACGCATGGGAATTTCCCCACAACGAGGAGCAAGAAAAATGCG
TGGCTGCTCTTTAAATGAAGCTGTCCATCCCTTCGCTTTTCCTGGCCTGT
GCCGTCTTTACTTTAGGTAAAGGAACTGTCAATGCTGGCAGCATGCGTGG
TGCAGAAAAGAAAGTGAACGGTGAGAAATTAAAGATGCTGATTGACTGCT
TCGCCAGTTATATGGAGGACGCCTCCTACCGAGCTGATAACAGCAAACGG
GATGGGTGCACCGACGCTGAGATCCTCTACTGCCGTACAGACagCGGCTA
CAACGACCACTTCTGCCGCTTTGACGGGACCAACAACCTCATTGACATGG
GCGAGATCCCCCTTTTGGGGCCACAGGACGCGGTTCCCGAATGTTGGTTC
AATTGCCagATGGAGACTTGCAACGCATGGGAATTTCCCCACAACGAGGA
GCAAGAAAAATGCGTGGCTGCTCTTTAAATGAAGCTGTCCATCCCTTCGC
TTTTCCTGGCCTGTGCCGTCTTTACTTTAGGTAAAGGAACTGTCAATGCT
GGCAGCATGCGTGGTGCAGAAAAGAAAGTGAACGGTGAGAAATTAAAGAT
GCTGATTGACTGCTTCGCCAGTTATATGGAGGACGCCTCCTACCGAGCTG
ATAACAGCAAACGGGATGGGTGCACCGACGCTGAGATCCTCTACTGCCGT
ACAGACagCGGCTACAACGACCACTTCTGCCGCTTTGACGGGACCAACAA
CCTCATTGACATGGGCGAGATCCCCCTTTTGGGGCCACAGGACGCGGTTC
CCGAATGTTGGTTCAATTGCCagATGGAGACTTGCAACGCATGGGAATTT
CCCCACAACGAGGAGCAAGAAAAATGCGTGGCTGCTCTTTAAATGAAGCT
GTCCATCCCTTCGCTTTTCCTGGCCTGTGCCGTCTTTACTTTAGGTAAAG
GAACTGTCAATGCTGGCAGCATGCGTGGTGCAGAAAAGAAAGTGAACGGT
GAGAAATTAAAGATGCTGATTGACTGCTTCGCCAGTTATATGGAGGACGC
CTCCTACCGAGCTGATAACAGCAAACGGGATGGGTGCACCGACGCTGAGA
TCCTCTACTGCCGTACAGACagCGGCTACAACGACCACTTCTGCCGCTTT
GACGGGACCAACAACCTCATTGACATGGGCGAGATCCCCCTTTTGGGGCC
ACAGGACGCGGTTCCCGAATGTTGGTTCAATTGCCagATGGAGACTTGCA
ACGCATGGGAATTTCCCCACAACGAGGAGCAAGAAAAATGCGTGGCTGCT
CTTTAAATGAAGCTGTCCATCCCTTCGCTTTTCCTGGCCTGTGCCGTCTT
TACTTTAGGTAAAGGAACTGTCAATGCTGGCAGCATGCGTGGTGCAGAAA
AGAAAGTGAACGGTGAGAAATTAAAGATGCTGATTGACTGCTTCGCCAGT
TATATGGAGGACGCCTCCTACCGAGCTGATAACAGCAAACGGGATGGGTG
CACCGACGCTGAGATCCTCTACTGCCGTACAGACagCGGCTACAACGACC
ACTTCTGCCGCTTTGACGGGACCAACAACCTCATTGACATGGGCGAGATC
CCCCTTTTGGGGCCACAGGACGCGGTTCCCGAATGTTGGTTCAATTGCCa
gATGGAGACTTGCAACGCATGGGAATTTCCCCACAACGAGGAGCAAGAAA
AATGCGTGGCTGCTCTTTAA back to top
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