rna7782, rna7782 (mRNA) Nannochloropsis gaditana

Overview
Namerna7782
Unique Namerna7782
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length970
Alignment locationCM002473.1:369992..371107 -

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Properties
Property NameValue
ProductNAD(P)-binding domain protein
Orig transcript idgnl|cribi|Naga_101284g2.10103.mrna
Orig protein idgnl|cribi|Naga_101284g2.10103
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:369992..371107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101284g2gene7538Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7782rna7782-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22911.1cds7761Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7782 ID=rna7782|Name=rna7782|organism=Nannochloropsis gaditana|type=mRNA|length=970bp
GGAGAGGTGGCGAAAGGGGAAGCACCTGCCTCCCCGTCCCTGATCGACCC
AGAGGAGGATCCAGATCCTGTAGGTCTTTCCCAGCCATTGAGCCAGACGC
AATACGCCGAGGTGATGAAGGGGAGGAGGAAGTCGAGGGATCCCCCCTTC
CTTTCGCGCCATTTTATCCCTGTGGCGTCCCCCGCGATTCTAAGGAGGAA
CATGGAGGGCAGGTTGGAAGATGAGGAAGGAGGAGGAGCGAACGGCTCCC
TCGAATTGGCTTCCACGGACAGGAAGGAGGCAGAAGAGCCATGACGCACG
CAAAGGAGGGAAGAAGCAAGAGGCGCGGAGGGAGGGAAAGAAAGAAAGAG
AAGGGAGAGAGAGAGCACGAAAGAGGAAGGGATGTAGAATGAGAGAGAAG
ACCCACAACACGTCTTCACACGTGCTTGCCAGTGTGCTCGGGGACAAAGA
GAAGCAAAGAGGGAGGGAAGGAGGGAGGGAGGGAGGGTGCAGGAGGGGAT
CGAGAAAGGGTTCGGACGGCCCCTCCTTGTCAGACGCCGTACAATCCGTG
GAGCCCTGTCCCATCCATAGCAGTTGGAAGAGAGAAGAGAGAGAACGATT
CCGCATTGCCCTAGACTCAGGGGCCATTCAAGGAGATGCAGAAAAGGGAA
GAGAAAGCAGAGCACGCGCATGGTTGAAGTTGCCAACGGTGTTTCATTTT
TTCCTCTGTAGCCTGTTCTCTTGCAAAGCCTTCGCACCCTCAATACCCTC
GGTCCACCCACACCCGATTCCGCATGCCCCCGCCCTCTTTCCCGCCCTCC
TTCCCGCCCGCCTTCCCGCCCTGCCACCCGTCATTGATGAGCGCAGCCAA
GGCCTCCATCCTTCGCGTCTCACTCTCCCCCACCCCGGCTGCCCCCGCGC
GGTGGGGGGACATGACCACGTTGGGAAGCTCGTGGAAGGGGAAGCGGGAG
GGAGGCATGTGCGGCTCATG
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protein sequence of rna7782

>rna7782-protein ID=rna7782-protein|Name=rna7782|organism=Nannochloropsis gaditana|type=polypeptide|length=218bp
MRQALPPYSSRLLFLGSCTLVVSIPLVLLALRLPSTSTFLQRTVDRVSGR
IKEKKQRPRALPPASLHVHVALKGVTVRESDIGLLRSLLHPSITLTHGDE
VDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHL
SVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWRAGGGPSLNVT
MREEAAGVCIPGSARRGA
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mRNA from alignment at CM002473.1:369992..371107-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7782 ID=rna7782|Name=rna7782|organism=Nannochloropsis gaditana|type=mRNA|length=1116bp|location=Sequence derived from alignment at CM002473.1:369992..371107- (Nannochloropsis gaditana)
ACACGTAGGTCATACGCAGGGCTTCCCTCGGGGTACCTGTCCTTTTGTCC
GCTTGATGCGGCAGGCCCTCCCTCCCTACTCATCGCGACTACTCTTCCTG
GGCTCCTGCACTCTGGTCGTGTCCATCCCCCTTGTCCTCCTGGCCTTACG
CCTTCCTTCGACATCCACATTTCTCCAACGCACGGTCGACCGCGTGTCGG
GACGCATCAAGGAAAAAAAACAGCGCCCGCGGGCACTGCCCCCGGCGTCT
TTACATGTGCATGTCGCCTTGAAAGGCGTTACAGTCCGGGAAAGCGATAT
CGGACTCCTGCGATCCTTGCTCCATCCCTCCATCACCCTCACGCATGGCG
ACGAGGTGGACCCCCTCACTCAAGTCCTGGTGGCGAATTTCCCTTCCAAA
GGTAAAGAAAGGAGGACGACAACGTCTCCGAAGGCGTGGTAGGGAGCGAA
TCAGAGGAGGGAAGGAAGAATCACGAGGGGCCAGGGGGAAAGAGGAAAAA
GGAATGAAGAGGGACAAGAGTGACGGAGGGGAACGCGGGAAGGAGGGGGG
AAAAGGTGTGAGACAAGCTCCTCCGTACCGACGACAAGTTTCCCACCTCC
CTCCTTCCGTCCCTACCTCCCGCCCTCCCCCCCGCCCTCCCTCCCTCCTT
CGCACAGAGCTTTTGGCCCGCCTCGCGCCTACCCTGCGCGCCCTTATCTT
CCCTTTCGCCGGAGTGCCCCTCCCTTTCCTCGCGCACTGCGCCTCCGTCC
ACCCCCACCTCTCCGTCCACAACCTTCACCACAACGCTCCCCCTACCGCG
GAAATGGGCCTGACCCTCCTCTTGGCGGCGGCGAAGTGCCTCCTGCCCGC
GGACGCCCAGCTCCGTCGCGGCGATTGGAGGGCCGGGGGAGGGCCGTCGT
TGAACGTGACCATGCGCGAAGAGGCCGCAGGTGTGTGCATACCCGGATCA
GCCCGGCGGGGCGCATGAACAAGCTATCCCTCTTGACTACTGAGACTCCG
TTTCTTCCCTCCTGTGTATGGACAAGCTCCCTCTTGACTATTGAGGCTCC
ATCCCTTCCCTCCTTCGTTCTTCCCCCGTTCCATTACCCTCCCCTCCTTC
GTTCTTCCCCCCTACC
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Coding sequence (CDS) from alignment at CM002473.1:369992..371107-

>rna7782 ID=rna7782|Name=rna7782|organism=Nannochloropsis gaditana|type=CDS|length=1314bp|location=Sequence derived from alignment at CM002473.1:369992..371107- (Nannochloropsis gaditana)
AGCTTTTGGCCCGCCTCGCGCCTACCCTGCGCGCCCTTATCTTCCCTTTC
GCCGGAGTGCCCCTCCCTTTCCTCGCGCACTGCGCCTCCGTCCACCCCCA
CCTCTCCGTCCACAACCTTCACCACAACGCTCCCCCTACCGCGGAAATGG
GCCTGACCCTCCTCTTGGCGGCGGCGAAGTGCCTCCTGCCCGCGGACGCC
CAGCTCCGTCGCGGCGATTGGAGGGCCGGGGGAGGGCCGTCGTTGAACGT
GACCATGCGCGAAGAGGCCGCAGGTGTGTGCATACCCGGATCAGCCCGGC
GGGGCGCATGAATGCGGCAGGCCCTCCCTCCCTACTCATCGCGACTACTC
TTCCTGGGCTCCTGCACTCTGGTCGTGTCCATCCCCCTTGTCCTCCTGGC
CTTACGCCTTCCTTCGACATCCACATTTCTCCAACGCACGGTCGACCGCG
TGTCGGGACGCATCAAGGAAAAAAAACAGCGCCCGCGGGCACTGCCCCCG
GCGTCTTTACATGTGCATGTCGCCTTGAAAGGCGTTACAGTCCGGGAAAG
CGATATCGGACTCCTGCGATCCTTGCTCCATCCCTCCATCACCCTCACGC
ATGGCGACGAGGTGGACCCCCTCACTCAAGTCCTGGTGGCGAATTTCCCT
TCCAAAGAGCTTTTGGCCCGCCTCGCGCCTACCCTGCGCGCCCTTATCTT
CCCTTTCGCCGGAGTGCCCCTCCCTTTCCTCGCGCACTGCGCCTCCGTCC
ACCCCCACCTCTCCGTCCACAACCTTCACCACAACGCTCCCCCTACCGCG
GAAATGGGCCTGACCCTCCTCTTGGCGGCGGCGAAGTGCCTCCTGCCCGC
GGACGCCCAGCTCCGTCGCGGCGATTGGAGGGCCGGGGGAGGGCCGTCGT
TGAACGTGACCATGCGCGAAGAGGCCGCAGGTGTGTGCATACCCGGATCA
GCCCGGCGGGGCGCATGAATGCGGCAGGCCCTCCCTCCCTACTCATCGCG
ACTACTCTTCCTGGGCTCCTGCACTCTGGTCGTGTCCATCCCCCTTGTCC
TCCTGGCCTTACGCCTTCCTTCGACATCCACATTTCTCCAACGCACGGTC
GACCGCGTGTCGGGACGCATCAAGGAAAAAAAACAGCGCCCGCGGGCACT
GCCCCCGGCGTCTTTACATGTGCATGTCGCCTTGAAAGGCGTTACAGTCC
GGGAAAGCGATATCGGACTCCTGCGATCCTTGCTCCATCCCTCCATCACC
CTCACGCATGGCGACGAGGTGGACCCCCTCACTCAAGTCCTGGTGGCGAA
TTTCCCTTCCAAAG
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Synonyms
Publications