EWM22911.1, cds7761 (CDS) Nannochloropsis gaditana

Overview
NameEWM22911.1
Unique Namecds7761
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:370707..371052 -
Alignment locationCM002473.1:370140..370450 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22911.1
ProductNAD(P)-binding domain protein
Orig transcript idgnl|cribi|Naga_101284g2.10103.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:370707..371052 -
CM002473.1supercontigCM002473.1:370140..370450 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|585103592|gb|EWM22911.1| (NAD(P)-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 430.639 bits (1106), Expect = 2.283e-152
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
Query:    1 MRQALPPYSSRLLFLGSCTLVVSIPLVLLALRLPSTSTFLQRTVDRVSGRIKEKKQRPRALPPASLHVHVALKGVTVRESDIGLLRSLLHPSITLTHGDEVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWRAGGGPSLNVTMREEAAGVCIPGSARRGA 218
            MRQALPPYSSRLLFLGSCTLVVSIPLVLLALRLPSTSTFLQRTVDRVSGRIKEKKQRPRALPPASLHVHVALKGVTVRESDIGLLRSLLHPSITLTHGDEVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWRAGGGPSLNVTMREEAAGVCIPGSARRGA
Sbjct:    1 MRQALPPYSSRLLFLGSCTLVVSIPLVLLALRLPSTSTFLQRTVDRVSGRIKEKKQRPRALPPASLHVHVALKGVTVRESDIGLLRSLLHPSITLTHGDEVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWRAGGGPSLNVTMREEAAGVCIPGSARRGA 218          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|1129204665|gb|OLQ07111.1| (Glyoxylate reductase [Symbiodinium microadriaticum])

HSP 1 Score: 95.1301 bits (235), Expect = 3.935e-19
Identity = 55/121 (45.45%), Postives = 71/121 (58.68%), Query Frame = 0
Query:   79 ESDIGLLRSLLHPSITLTHGDEVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLP---FLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWRAGGGPS 196
            E+D   LR+ L P +  T G  V   TQ+LV  FP++  L      L+AL+ PFAG+P+     L     V   L VHN+HHN+  TAEM + L +AAAK LLPAD +LR+GDW   G PS
Sbjct:   62 EADQAELRARLRPEVQCTFGPVVPRGTQILVTAFPAESDLQACGVDLKALVIPFAGLPVATKNVLQEGGWVRRGLQVHNVHHNSSTTAEMAIALGMAAAKQLLPADQKLRKGDWSPRGLPS 182          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|922857764|gb|KOO25972.1| (d-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 78.5666 bits (192), Expect = 1.697e-13
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 0
Query:   55 KQRPRALPPASLHVHVALKGVTVRESD---IGLLRSLLHPSITLTHGDEVDPLTQVLV---ANFPSKELLARLA-PTLRALIFPFAGVPLPF------LAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWRAGGGP 195
            +QR RAL  A+     AL+    R+ D   + +LR+    ++++T G ++     VL+   A  P +   A  A P L+ALI  +AG+ LP       +A    +   +++HNLHHNAP TAEMG+ LLLAA K LLPADA+LR GDWR  G P
Sbjct:   22 RQR-RALTSAAKR---ALRAHYCRDVDDELLHVLRTSATEAVSVTAGGDLPDDVDVLIFPGAATPDRVYAAAAALPNLKALIMAYAGI-LPAQIDKMRVAFGDRLGSTVTLHNLHHNAPMTAEMGVALLLAATKRLLPADAKLRAGDWRPRGLP 170          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|1000254737|gb|KXK17667.1| (Phosphoglycerate dehydrogenase [Armatimonadetes bacterium OLB18])

HSP 1 Score: 74.7146 bits (182), Expect = 3.362e-12
Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = 0
Query:   80 SDIGLLRSLLHPSITLTHGDEVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDW 189
             ++  LR  +   I L  G+      +VLV  +P+ E L   +  LR++I PF GVP P         P LS+HN+HH+ P TAEM L L+ A  K ++P D  LR+G+W
Sbjct:   12 EEVARLREWVGEGIELFGGEPGPSDYEVLVDGWPNAERL-EASSVLRSVIVPFTGVP-PETLTLLRQRPRLSLHNIHHSGPETAEMALALMFAVCKRIVPMDRLLRKGEW 119          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|1150199442|gb|OOO03478.1| (Glycerate dehydrogenase [Chromatiales bacterium USCg_Taylor])

HSP 1 Score: 69.3218 bits (168), Expect = 2.069e-10
Identity = 55/131 (41.98%), Postives = 71/131 (54.20%), Query Frame = 0
Query:   63 PASLHVHVALKGVTVRESDIGLLRSLLHPSITLTHGD----EVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDW 189
            P  +H+    K        +  LR  LHP I LT GD      D   ++LV  FPS+  +A  +P LRALI P+AGVP+  L       P + VH+LH+N  PTAEM + LLLAAAK ++P D   RR  W
Sbjct:    5 PVKVHIQYGPK-----PEHLAALRERLHPEIQLTVGDGPPRPAD--FEILVHGFPSRADVA-ASPKLRALIVPWAGVPIETL-DLMRTFPGIPVHSLHYNVGPTAEMAIALLLAAAKMIVPFDRNFRRHRW 126          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|1084583300|gb|OGO38989.1| (hypothetical protein A2W35_02840 [Chloroflexi bacterium RBG_16_57_11])

HSP 1 Score: 68.5514 bits (166), Expect = 4.035e-10
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 0
Query:   85 LRSLLHPSITLTHGDEV-DPLT-QVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWR 190
            L S L P I LT G  + DP T +VLVA  P+++ L + +P LR ++ PFAG+P           P+L VHNLHHNA  TAEM L LLLAA+K ++P D  LR  DWR
Sbjct:   17 LESRLLPEIRLTVGQLLPDPATFEVLVAGRPNRQQL-QASPNLRIVVIPFAGLP-DATRLVLQDFPNLVVHNLHHNAAITAEMALALLLAASKFIVPYDQALRHNDWR 122          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|931547786|gb|KPL22786.1| (hypothetical protein AMJ93_06355 [Anaerolineae bacterium SM23_84])

HSP 1 Score: 68.1662 bits (165), Expect = 4.506e-10
Identity = 51/113 (45.13%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   79 ESDIGLLRSLLHPSITLTHGDE--VDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDW 189
            E+ +  LR+ LHP ITL+ G    V     +LVA  P++E +   +P L  LI P++GVP           P ++VHNLHHNA P AE+ L LLLAAAK L+P D  LR  DW
Sbjct:    7 ETVLNQLRAKLHPDITLSTGSNLPVPAEYDILVAGRPAREHIT-ASPNLHTLIIPWSGVP-ESTRQLMLEFPQIAVHNLHHNAQPVAELALALLLAAAKFLIPMDRALRSHDW 117          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|931513788|gb|KPK91745.1| (hypothetical protein AMJ88_12870 [Anaerolineae bacterium SM23_ 63])

HSP 1 Score: 67.3958 bits (163), Expect = 8.999e-10
Identity = 57/113 (50.44%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   79 ESDIGLLRSLLHPSITLTHGDEV--DPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDW 189
            E  +  L++ L PSI L+ G E+  D    VLVA  P +E LA   P L+ALI PFAGVP           P +SVHNLH+NA  T+EM L LLLAAAK LLP D  LR  DW
Sbjct:   13 EGSLAHLQAHLLPSIQLSLGSELPSDRNVDVLVAGRPKREHLAA-CPDLQALIIPFAGVPKE-TCDLMKEFPQISVHNLHYNAAATSEMALALLLAAAKFLLPIDRALRANDW 123          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|1160021785|gb|OPL18449.1| (hypothetical protein AVO35_03725 [Candidatus Aegiribacteria bacterium MLS_C])

HSP 1 Score: 66.2402 bits (160), Expect = 3.006e-9
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   92 SITLTHGDEVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDW 189
             +TLT G  +     VLV   P +ELL   AP L  L+ P+AG+P          +P ++VHN+HHNA   AE+ + L++AA + +L +D  LR GDW
Sbjct:   30 GVTLTTGS-ISGNCSVLVCGRPGRELL-EAAPGLSHLLIPWAGLP-ESTRELMMEYPGIAVHNIHHNAAFAAELAVGLMIAAGRLILSSDRALRMGDW 124          
BLAST of EWM22911.1 vs. NCBI_GenBank
Match: gi|1041168526|emb|CUS04561.2| (putative dehydrogenase [Ardenticatena])

HSP 1 Score: 65.855 bits (159), Expect = 3.200e-9
Identity = 57/127 (44.88%), Postives = 77/127 (60.63%), Query Frame = 0
Query:   64 ASLHVHVALKGVTVRESDIGLLRSLLHPSITLTHGDEVDPLTQVLVANFPSKELLARLAPTLRALIFPFAGVPLPFLAHCASVHPHLSVHNLHHNAPPTAEMGLTLLLAAAKCLLPADAQLRRGDWR 190
            A LHVH   + +T  E+   +L+ LL P+I L+ G +      +L++  P++E LA  AP LRA++ P+AG+P       A   P ++VHNLHHNA P AE+ L LLLAAAK  L  D  LR GDWR
Sbjct:    2 ADLHVHFD-RPLTADEA--AVLKPLLSPAIALSAGADAPADATILISGRPTREQLA-AAPGLRAVVIPWAGLPGETRDLLADF-PGVAVHNLHHNAAPVAELALMLLLAAAKFALRYDRALRAGDWR 123          
The following BLAST results are available for this feature:
BLAST of EWM22911.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103592|gb|EWM22911.1|2.283e-152100.00NAD(P)-binding domain protein [Nannochloropsis gad... [more]
gi|1129204665|gb|OLQ07111.1|3.935e-1945.45Glyoxylate reductase [Symbiodinium microadriaticum... [more]
gi|922857764|gb|KOO25972.1|1.697e-1340.91d-isomer specific 2-hydroxyacid dehydrogenase NAD-... [more]
gi|1000254737|gb|KXK17667.1|3.362e-1238.18Phosphoglycerate dehydrogenase [Armatimonadetes ba... [more]
gi|1150199442|gb|OOO03478.1|2.069e-1041.98Glycerate dehydrogenase [Chromatiales bacterium US... [more]
gi|1084583300|gb|OGO38989.1|4.035e-1049.07hypothetical protein A2W35_02840 [Chloroflexi bact... [more]
gi|931547786|gb|KPL22786.1|4.506e-1045.13hypothetical protein AMJ93_06355 [Anaerolineae bac... [more]
gi|931513788|gb|KPK91745.1|8.999e-1050.44hypothetical protein AMJ88_12870 [Anaerolineae bac... [more]
gi|1160021785|gb|OPL18449.1|3.006e-939.80hypothetical protein AVO35_03725 [Candidatus Aegir... [more]
gi|1041168526|emb|CUS04561.2|3.200e-944.88putative dehydrogenase [Ardenticatena][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7782rna7782Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications