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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101697g1.10558.mrna |
| Orig protein id | gnl|cribi|Naga_101697g1.10558 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:368364..369333 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7781 ID=rna7781|Name=rna7781|organism=Nannochloropsis gaditana|type=mRNA|length=2621bp
GGGAATGTAGATAAAGTACGAAAGCGTGCACACGCAGGAGTAAAGACCCA
AGGAACGCCTCCTCAACGTACAACTCCTTCGACCACCCAACTGAAGAAGT
CCCACCGAGCATGCGGCGCGGCTCTTCCTTGACTCCTCCTCCAGGGTTGA
GAGGACATGAAATCAGTTCCGGAAGATCCAGGCAGGCGTCTCCAGTCTCG
TCCTTGGGCCAGCGTGCAGCATCCCCAAGCCGTCTTGCCAGCTCTCGCCG
GGAAAGCCTCAGCCACGACTTCGCTGCCATGGTGTCCATGTTGGAGGCGG
AGCACCAAGCTTCCTTCGACCCACCCTCCACCGTGCCCATCCACAATCCC
AAATACATCCACAGCTACAGCCACAGCCCTAATCGGCCTTCTTCCCCTTT
CTCTGTCGGCTCAAGGCCGTCCTCCCCTTCCTCCCTCCCTTCCTCCCTCC
CTTCCTCCCCGACCTCCGCCGTCCCCACGGGCACCCCCACCAGTTTTCGG
CCCCTCTCGTTGTCGCCCAAGCACATGGTCGCTTCCCCTCCTTCCTCCCG
CCCTCCCTCCTCCTCCCCCACGGCCATCGGCCCCCTACGCAGGCACACAG
ACGCGCGACAACCCTCCCTCGGTCGTCGTGGGCAGGCGGCGGCCCATCCT
CTTCCCATGACGCAGGCCAGCCACCGAGCTTCCTCCCCGCCTGGGGCCTT
ATTGGCCGGAAACAAAGGGGAACGCTCCCCCATGTCTTCGCCGTCCCTGT
CCCACACACCCAGCGTTCAGGACCCCAACCAATGCAGCCACCCACAGGCC
AGCCACGGGCACACGTCCGGGACTGCGGGGGAGAAAATCAAGGTGTGCGT
GCGCGTCCGGCCCTTGGACCCGAACCGGGAGGAAGAGGAAGCGTGGACGT
ACGACCCCCACGTGATCAGTCAAGCGGTCTTTCCCGCCTGGGAGGCCAAG
TCTATGTACCGGCAATTAGCGGGTCGGGCCCAGGTGGCCTATGCCTTTGA
CAACCTCTTTGGGCCCGAACGCAGCACCAGGGAGATCTACGCCGAGGCCC
TGCGCGACCTGGTCCACGCCTCGCTTCAGGGGATCCACGCCACAGTCTTC
GCCTACGGGCAGACGGCGACGGGCAAAACTTACACCCTTCAAGGGACTCG
CACGGCGCCCGGGGTCATCCCCATGGCGGTCCACGACTGCTTTGCGAACG
TCCCGGAAGGCCGGACGTGCCGCTTCCGAGTTTCGTACCTGGAAATTTAC
AACGAGCAAATTCGGGACTTACTGCGTCCCGAAACGCCCTCCAGCAAGAT
TCAGGTGTTGGACGACAAGGAGGGCGGGATCATCGTCAAAGGCTTGCAAG
AAGCAGTCGTGGAAAGCCCATTGGAGGCCTTGGCCCTGGTCGCCCAGGGA
GAAGAGCAACGTCACGTGGGCGCCACCGAATTGAACGAAGTTTCCTCCCG
CTCCCACACCATCTTCCGCCTTAGCATCGAGTCGCATGCCTCGGAGGACA
AAGCCGTCCCGCCCACGTCCAAGCGGACCTCCATCTTGAGCCTCATCGAT
CTGGCCGGGTCGGAGAACGCCAAGCTCACGAATGCCAAGGGCGGGCGGCA
ACGGGAAGGGCAATTCATCAATAAGAGTCTTCTGGCACTCGGCCACGTCA
TCCAAAAGCTCTCCGAGGCGACCGGGTGGCGGAATATCCCCGGTTCCCCG
CACATTCCTTTCCGTGACTCGAAGCTGACCCGTTTCTTGCAACCGGCCTT
GGAAGGAAATGCCCTGGTCGCCATCGTCTGCTCCATCTCTTCTGCCGTCT
CTTGTTTGGATGAAACCCATCACACCTTGAAATTTGCCTCCCGGGCAAAG
AAAATCCAGGTCCAGGCGGCCGTGAACGAGATCCCCGACGAAGGCGCGTT
GCTGGTGAAATACCAAGAGGAAATCGTCGCCCTCCGCGCCCAATTGGCCC
GGGCGTCCGCCCTCTCCGCCACCAGCCCCCGCCTGCGAAGCCTCCACCGG
GCAGCGTCCTTGTCTCGGATGGAATCAGGGGCTAGCTTGACTCGGGCAGG
AACGGCCAGCACCTGGGAAGATGCGGCGGGAAGCGTGTCGGGGTCACCCC
AGGTATCGGTGCACCGTGTCGTGAGCATCATCGAGAAGGTGCTGGAGGCT
GCCATGGGCGAGGAGGAGGGCGGGGAGGGAGCGCACGGGGCGGACACCTC
CGCAACAAGCTCGGATTTGGTCGTGGCGCTGCGGCAGCTCCGTGCGGACG
TGTGGGCATTGAGCGGCCCCGAAGGCCGGCAGGCCACCTGCCCCGCGCCC
GAAGCGGTGTCGCCGCAGGCGGAAGCACCCGTTTTGCCCCTCGACACGGG
CGAGGACGAGACCTTGCCAGCCGCCAACGACCAAGGGAACCGCACAAGGA
ATGATGAGCAGGGAAGGGAGGTGGAGGGGGACGACGCGGACGTCTCGGGG
CAATGGGGAGACCTGTGCGGGCGCCTGGAGCAATTGCAGGTGAAGGAAAC
ATTGAGTCAGGCGGATCGAAAGTTCCTCCAGCGGACGATTTTGGAGCAAG
AGATATTGTTCATGCCCTCACGTCTGCAGAGTATGCATATGCCGAAGGAA
GAACAAAGGGCGGGGAACTAG back to topprotein sequence of rna7781 >rna7781-protein ID=rna7781-protein|Name=rna7781|organism=Nannochloropsis gaditana|type=polypeptide|length=250bp
MRKEEERTAPSNWLPRTGRRQKSHDARKGGKKQEARREGKKEREGRERAR
KRKGCRMREKTHNTSSHVLASVLGDKEKQRGREGGREGGCRRGSRKGSDG
PSLSDAVQSVEPCPIHSSWKREERERFRIALDSGAIQGDAEKGRESRARA
WLKLPTVFHFFLCSLFSCKAFAPSIPSVHPHPIPHAPALFPALLPARLPA
LPPVIDERSQGLHPSRLTLPHPGCPRAVGGHDHVGKLVEGEAGGRHVRLM back to topmRNA from alignment at CM002473.1:368364..369333+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7781 ID=rna7781|Name=rna7781|organism=Nannochloropsis gaditana|type=mRNA|length=970bp|location=Sequence derived from alignment at CM002473.1:368364..369333+ (Nannochloropsis gaditana)
ggagaggtggcgaaaggggaagcacctgcctccccgtccctgaTCGACCC
AGAGGAGGATCCAGATCCTGTAGGTCTTTCCCAGCCATTGAGCCAGACGC
AATACGCCGAGgtgatgaaggggaggaggaagtcgagggatccccccttc
ctttcgcgccattttaTCCCTGTGGCGTCCCCCGCGATTCTAAGGAGGAA
CATGGAGGGCAGGttggaagatgaggaaggaggaggagcgaacGGCTCCC
TCGAATTGGCTTCcacggacaggaaggaggcagaagagcCATGACGcacg
caaaggagggaagaagcaagaggcgcggagggagggaaagaaagaaagag
aagggagagagagagcacgaaagaggaagggatgtaGAATGAGAGAGAAG
ACCCACAACACGTCTTCACACGTGCTTGCCAGTGTGCTCGGGGACAAAGA
GaagcaaagagggagggaaggagggagggagggagggtgcaggAGGGGAT
CGAGAAAGGGTTCGGACGGCCCCTCCTTGTCAGACGCCGTACAATCCGTG
GAGCCCTGTCCCATCCATAGCAGttggaagagagaagagagagaacgATT
CCGCATTGCCCTAGACTCAGGGGCCATTCAAGGAGATgcagaaaagggaa
gagaaagcagagcACGCGCATGGTTGAAGTTGCCAACGGTgtttcatttt
ttcctctGTAGCCTGTTCTCTTGCAAAGCCTTCGCACCCTCAATACCCTC
GGTCCACCCACACCCGATTCCGcatgcccccgccctctttcccgccctcc
ttcccgcccgccttcccgccctgccaCCCGTCATTGATGAGCgcagccaa
ggcctccatccTTCGCGTCTcactctcccccaccccggCTGCCCCCGCGC
GGTGGGGGGACATGACCACGTTGGGAAGctcgtggaaggggaagcgggag
ggaggcatgtgCGGCTCATG back to topCoding sequence (CDS) from alignment at CM002473.1:368364..369333+ >rna7781 ID=rna7781|Name=rna7781|organism=Nannochloropsis gaditana|type=CDS|length=750bp|location=Sequence derived from alignment at CM002473.1:368364..369333+ (Nannochloropsis gaditana)
atgaggaaggaggaggagcgaacGGCTCCCTCGAATTGGCTTCcacggac
aggaaggaggcagaagagcCATGACGcacgcaaaggagggaagaagcaag
aggcgcggagggagggaaagaaagaaagagaagggagagagagagcacga
aagaggaagggatgtaGAATGAGAGAGAAGACCCACAACACGTCTTCACA
CGTGCTTGCCAGTGTGCTCGGGGACAAAGAGaagcaaagagggagggaag
gagggagggagggagggtgcaggAGGGGATCGAGAAAGGGTTCGGACGGC
CCCTCCTTGTCAGACGCCGTACAATCCGTGGAGCCCTGTCCCATCCATAG
CAGttggaagagagaagagagagaacgATTCCGCATTGCCCTAGACTCAG
GGGCCATTCAAGGAGATgcagaaaagggaagagaaagcagagcACGCGCA
TGGTTGAAGTTGCCAACGGTgtttcattttttcctctGTAGCCTGTTCTC
TTGCAAAGCCTTCGCACCCTCAATACCCTCGGTCCACCCACACCCGATTC
CGcatgcccccgccctctttcccgccctccttcccgcccgccttcccgcc
ctgccaCCCGTCATTGATGAGCgcagccaaggcctccatccTTCGCGTCT
cactctcccccaccccggCTGCCCCCGCGCGGTGGGGGGACATGACCACG
TTGGGAAGctcgtggaaggggaagcgggagggaggcatgtgCGGCTCATG back to top
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