EWM22913.1, cds7760 (CDS) Nannochloropsis gaditana

Overview
NameEWM22913.1
Unique Namecds7760
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:368584..369333 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22913.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101697g1.10558.mrna
GbkeyCDS
End range.
End range369333
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:368584..369333 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22913.1 vs. NCBI_GenBank
Match: gi|585103595|gb|EWM22913.1| (hypothetical protein Naga_101697g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 498.049 bits (1281), Expect = 4.533e-178
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0 
Query:    1 MRKEEERTAPSNWLPRTGRRQKSHDARKGGKKQEARREGKKEREGRERARKRKGCRMREKTHNTSSHVLASVLGDKEKQRGREGGREGGCRRGSRKGSDGPSLSDAVQSVEPCPIHSSWKREERERFRIALDSGAIQGDAEKGRESRARAWLKLPTVFHFFLCSLFSCKAFAPSIPSVHPHPIPHAPALFPALLPARLPALPPVIDERSQGLHPSRLTLPHPGCPRAVGGHDHVGKLVEGEAGGRHVRLM 250
            MRKEEERTAPSNWLPRTGRRQKSHDARKGGKKQEARREGKKEREGRERARKRKGCRMREKTHNTSSHVLASVLGDKEKQRGREGGREGGCRRGSRKGSDGPSLSDAVQSVEPCPIHSSWKREERERFRIALDSGAIQGDAEKGRESRARAWLKLPTVFHFFLCSLFSCKAFAPSIPSVHPHPIPHAPALFPALLPARLPALPPVIDERSQGLHPSRLTLPHPGCPRAVGGHDHVGKLVEGEAGGRHVRLM
Sbjct:    1 MRKEEERTAPSNWLPRTGRRQKSHDARKGGKKQEARREGKKEREGRERARKRKGCRMREKTHNTSSHVLASVLGDKEKQRGREGGREGGCRRGSRKGSDGPSLSDAVQSVEPCPIHSSWKREERERFRIALDSGAIQGDAEKGRESRARAWLKLPTVFHFFLCSLFSCKAFAPSIPSVHPHPIPHAPALFPALLPARLPALPPVIDERSQGLHPSRLTLPHPGCPRAVGGHDHVGKLVEGEAGGRHVRLM 250
The following BLAST results are available for this feature:
BLAST of EWM22913.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103595|gb|EWM22913.1|4.533e-178100.00hypothetical protein Naga_101697g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7781rna7781Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications