rna7777, rna7777 (mRNA) Nannochloropsis gaditana

Overview
Namerna7777
Unique Namerna7777
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length336
Alignment locationCM002473.1:352736..353998 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101175g1.7417.mrna
Orig protein idgnl|cribi|Naga_101175g1.7417
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:352736..353998 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101175g1gene7533Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22917.1cds7756Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7777rna7777-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7777 ID=rna7777|Name=rna7777|organism=Nannochloropsis gaditana|type=mRNA|length=336bp
ATGCCCAGAGGAAGACTGTTGGTCGCCGTTACTCATTCAAACCAGCGGTT
ACTCGCACGCGGAGGCGAAACGGGCGGGGGAACTGGTGGCAGAAACGGTC
CAGGAGCCGTTACCCCTGGTGGGGACGAAACGGTTGACGGCCTTGACCAG
AAAATACGCGTCCCCGCGGTGCAGAGAAGTGAGCGCCATGTCGTCCCCTG
CGCATGGGTGGAGAACGACGGCGAAGTTGTCCAAGAACCACTCGGCCCTT
TAAATTCAAATTTGAATTCAAACGGTGGAGCAAACGAGAAGCGAACAAGA
AGGTTGCCCTTAAAAGGTGGTAGGCTCGCGGAATAG
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protein sequence of rna7777

>rna7777-protein ID=rna7777-protein|Name=rna7777|organism=Nannochloropsis gaditana|type=polypeptide|length=420bp
MRNHARHRAVCLLFAALGAMAQRQEAASTRSSPSALRGPDDPLTPPRALQ
TWTLPGGVTVGIGPNGITINPPAPEYPPPPPPAPPKPTSPPKEAPPQAAP
KVIPSPVIPKAALPPPPSPPPPPPPPPPPPPKPVVPALGGVTCASLGDTD
NYNAVQDPTCTAFLAQYYEHARMFAGFASDEQGKFMEEFCRPPPASSLSC
GQSLTMVLEAERLGCALPPPRPLPPSLPPSLPPSLPPSPPTETRQAPPTP
PLSTPGNDIVVPPDAAAAAAAAVTAHGAPEPLDTTPVTIQTANGPVAAPP
TTGGQKEAMAVEKAAAKKDETPQTGRKNVTEGMNSKAFPFDYPGLRLGCI
TDPTGGYCAMKRAAVPSEPLGRTETACDFFLSCCYAQYDRMHFDGLPPVE
EIETACPGAKAALRGPVCTV
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mRNA from alignment at CM002473.1:352736..353998-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7777 ID=rna7777|Name=rna7777|organism=Nannochloropsis gaditana|type=mRNA|length=1263bp|location=Sequence derived from alignment at CM002473.1:352736..353998- (Nannochloropsis gaditana)
ATGAGGAATCACGCACGGCACCGCGCGGTCTGCCTCCTCTTCGCGGCCCT
GGGGGCCATGGCCCAGCGCCAGGAAGCTGCGTCCACCCGGTCGTCCCCTT
CCGCCCTTCGAGGGCCAGATGATCCTTTAACCCCCCCGCGGGCGTTGCAG
ACATGGACGTTACCTGGCGGCGTCACGGTGGGCATTGGCCCAAACGGCAT
CACCATCAACCCTCCCGCCCCGGAGTATCCGCCCCCGCCCCCGCCAGCGC
CTCCGAAGCCGACCTCGCCTCCCAAGGAAGCACCGCCACAGGCGGCTCCT
AAAGTAATCCCTTCCCCGGTTATACCCAAAGCTGCTCTGCCTCCTCCCCC
TTCTCCTCCCCCTCCCCCTCCTCCCCCTCCTCCTCCTCCTCCCAAACCAG
TTGTTCCTGCCCTGGGAGGGGTGACATGCGCGTCCTTGGGGGATACGGAC
AATTACAACGCGGTCCAGGACCCCACGTGCACCGCTTTCCTTGCCCAGTA
CTACGAGCACGCTCGCATGTTCGCGGGCTTTGCGTCCGACGAACAAGGGA
AATTTATGGAGGAATTCTGTCGTCCTCCCCCAGCCTCCTCCCTCTCTTGC
GGCCAGTCCCTGACCATGGTCTTGGAAGCGGAACGCTTGGGCTGTGCGCT
GCCCCCTCCTCGGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCTT
CCCTCCCTCCCTCCCCTCCCACGGAGACACGACAAGCGCCCCCCACTCCA
CCCCTGTCGACCCCTGGGAACGACATTGTCGTCCCGCCCGATGCCGCCGC
CGCCGCCGCCGCGGCGGTTACGGCGCACGGCGCACCCGAGCCGTTGGATA
CCACGCCCGTTACAATTCAAACGGCCAACGGTCCCGTGGCCGCCCCTCCC
ACAACGGGCGGGCAGAAGGAGGCAATGGCAGTGGAAAAAGCGGCCGCCAA
AAAGGACGAAACCCCGCAGACGGGGCGCAAGAATGTGACGGAAGGAATGA
ATTCGAAAGCTTTTCCCTTTGACTACCCCGGTTTGCGTTTGGGGTGCATC
ACGGACCCGACAGGCGGTTACTGCGCCATGAAACGGGCGGCCGTTCCGTC
GGAGCCGTTGGGACGGACGGAAACGGCGTGCGACTTCTTTTTGTCGTGCT
GCTACGCGCAGTATGATCGTATGCACTTTGATGGCTTGCCTCCCGTGGAG
GAAATCGAGACAGCCTGTCCAGGTGCCAAAGCAGCCCTGCGGGGACCGGT
ATGTACGGTCTGA
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Coding sequence (CDS) from alignment at CM002473.1:352736..353998-

>rna7777 ID=rna7777|Name=rna7777|organism=Nannochloropsis gaditana|type=CDS|length=1263bp|location=Sequence derived from alignment at CM002473.1:352736..353998- (Nannochloropsis gaditana)
ATGAGGAATCACGCACGGCACCGCGCGGTCTGCCTCCTCTTCGCGGCCCT
GGGGGCCATGGCCCAGCGCCAGGAAGCTGCGTCCACCCGGTCGTCCCCTT
CCGCCCTTCGAGGGCCAGATGATCCTTTAACCCCCCCGCGGGCGTTGCAG
ACATGGACGTTACCTGGCGGCGTCACGGTGGGCATTGGCCCAAACGGCAT
CACCATCAACCCTCCCGCCCCGGAGTATCCGCCCCCGCCCCCGCCAGCGC
CTCCGAAGCCGACCTCGCCTCCCAAGGAAGCACCGCCACAGGCGGCTCCT
AAAGTAATCCCTTCCCCGGTTATACCCAAAGCTGCTCTGCCTCCTCCCCC
TTCTCCTCCCCCTCCCCCTCCTCCCCCTCCTCCTCCTCCTCCCAAACCAG
TTGTTCCTGCCCTGGGAGGGGTGACATGCGCGTCCTTGGGGGATACGGAC
AATTACAACGCGGTCCAGGACCCCACGTGCACCGCTTTCCTTGCCCAGTA
CTACGAGCACGCTCGCATGTTCGCGGGCTTTGCGTCCGACGAACAAGGGA
AATTTATGGAGGAATTCTGTCGTCCTCCCCCAGCCTCCTCCCTCTCTTGC
GGCCAGTCCCTGACCATGGTCTTGGAAGCGGAACGCTTGGGCTGTGCGCT
GCCCCCTCCTCGGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCTT
CCCTCCCTCCCTCCCCTCCCACGGAGACACGACAAGCGCCCCCCACTCCA
CCCCTGTCGACCCCTGGGAACGACATTGTCGTCCCGCCCGATGCCGCCGC
CGCCGCCGCCGCGGCGGTTACGGCGCACGGCGCACCCGAGCCGTTGGATA
CCACGCCCGTTACAATTCAAACGGCCAACGGTCCCGTGGCCGCCCCTCCC
ACAACGGGCGGGCAGAAGGAGGCAATGGCAGTGGAAAAAGCGGCCGCCAA
AAAGGACGAAACCCCGCAGACGGGGCGCAAGAATGTGACGGAAGGAATGA
ATTCGAAAGCTTTTCCCTTTGACTACCCCGGTTTGCGTTTGGGGTGCATC
ACGGACCCGACAGGCGGTTACTGCGCCATGAAACGGGCGGCCGTTCCGTC
GGAGCCGTTGGGACGGACGGAAACGGCGTGCGACTTCTTTTTGTCGTGCT
GCTACGCGCAGTATGATCGTATGCACTTTGATGGCTTGCCTCCCGTGGAG
GAAATCGAGACAGCCTGTCCAGGTGCCAAAGCAGCCCTGCGGGGACCGGT
ATGTACGGTCTGA
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Synonyms
Publications