EWM22917.1, cds7756 (CDS) Nannochloropsis gaditana

Overview
NameEWM22917.1
Unique Namecds7756
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:352736..353998 -

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Properties
Property NameValue
Protein idEWM22917.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101175g1.7417.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:352736..353998 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22917.1 vs. NCBI_GenBank
Match: gi|585103607|gb|EWM22917.1| (hypothetical protein Naga_101175g1 [Nannochloropsis gaditana])

HSP 1 Score: 818.15 bits (2112), Expect = 0.000e+0
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0 
Query:    1 MRNHARHRAVCLLFAALGAMAQRQEAASTRSSPSALRGPDDPLTPPRALQTWTLPGGVTVGIGPNGITINPPAPEYPPPPPPAPPKPTSPPKEAPPQAAPKVIPSPVIPKAALPPPPSPPPPPPPPPPPPPKPVVPALGGVTCASLGDTDNYNAVQDPTCTAFLAQYYEHARMFAGFASDEQGKFMEEFCRPPPASSLSCGQSLTMVLEAERLGCALPPPRPLPPSLPPSLPPSLPPSPPTETRQAPPTPPLSTPGNDIVVPPDAAAAAAAAVTAHGAPEPLDTTPVTIQTANGPVAAPPTTGGQKEAMAVEKAAAKKDETPQTGRKNVTEGMNSKAFPFDYPGLRLGCITDPTGGYCAMKRAAVPSEPLGRTETACDFFLSCCYAQYDRMHFDGLPPVEEIETACPGAKAALRGPVCTV 420
            MRNHARHRAVCLLFAALGAMAQRQEAASTRSSPSALRGPDDPLTPPRALQTWTLPGGVTVGIGPNGITINPPAPEYPPPPPPAPPKPTSPPKEAPPQAAPKVIPSPVIPKAALPPPPSPPPPPPPPPPPPPKPVVPALGGVTCASLGDTDNYNAVQDPTCTAFLAQYYEHARMFAGFASDEQGKFMEEFCRPPPASSLSCGQSLTMVLEAERLGCALPPPRPLPPSLPPSLPPSLPPSPPTETRQAPPTPPLSTPGNDIVVPPDAAAAAAAAVTAHGAPEPLDTTPVTIQTANGPVAAPPTTGGQKEAMAVEKAAAKKDETPQTGRKNVTEGMNSKAFPFDYPGLRLGCITDPTGGYCAMKRAAVPSEPLGRTETACDFFLSCCYAQYDRMHFDGLPPVEEIETACPGAKAALRGPVCTV
Sbjct:    1 MRNHARHRAVCLLFAALGAMAQRQEAASTRSSPSALRGPDDPLTPPRALQTWTLPGGVTVGIGPNGITINPPAPEYPPPPPPAPPKPTSPPKEAPPQAAPKVIPSPVIPKAALPPPPSPPPPPPPPPPPPPKPVVPALGGVTCASLGDTDNYNAVQDPTCTAFLAQYYEHARMFAGFASDEQGKFMEEFCRPPPASSLSCGQSLTMVLEAERLGCALPPPRPLPPSLPPSLPPSLPPSPPTETRQAPPTPPLSTPGNDIVVPPDAAAAAAAAVTAHGAPEPLDTTPVTIQTANGPVAAPPTTGGQKEAMAVEKAAAKKDETPQTGRKNVTEGMNSKAFPFDYPGLRLGCITDPTGGYCAMKRAAVPSEPLGRTETACDFFLSCCYAQYDRMHFDGLPPVEEIETACPGAKAALRGPVCTV 420
[Close]
BLAST of EWM22917.1 vs. NCBI_GenBank
Match: gi|553182746|ref|XP_005853779.1| (hypothetical protein NGA_0459000 [Nannochloropsis gaditana CCMP526] >gi|422295280|gb|EKU22579.1| hypothetical protein NGA_0459000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 93.2041 bits (230), Expect = 1.125e-17
Identity = 52/88 (59.09%), Postives = 60/88 (68.18%), Query Frame = 0 
Query:  338 FPFDYPGLRLGCITDPTG-GYCAMKRAAVPSEPLGRTET---ACDFFLSCCYAQYDRMHFDGLPP--VEEIETACPGAKAALRGPVCT 419
            FP DYPGLRLGCI DP    +CA+KRAAVP    G  E    ACDF+LSCCYAQY +  F  +P   VEE+E ACPG+ A L+G VCT
Sbjct:  210 FPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVG-GDAEDGGPACDFYLSCCYAQYVQT-FGSVPTEFVEEVEAACPGSTAFLQGSVCT 295
The following BLAST results are available for this feature:
BLAST of EWM22917.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103607|gb|EWM22917.1|0.000e+0100.00hypothetical protein Naga_101175g1 [Nannochloropsi... [more]
gi|553182746|ref|XP_005853779.1|1.125e-1759.09hypothetical protein NGA_0459000 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7777rna7777Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications