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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101147g1.1289.mrna |
| Orig protein id | gnl|cribi|Naga_101147g1.1289 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:345560..346996 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7774 ID=rna7774|Name=rna7774|organism=Nannochloropsis gaditana|type=mRNA|length=643bp
GCTGCGGTAACATTTGAGCTTGGATTCCGTTAGAGGAGGTGCCACTCAAT
GTATGTTCAAGTATCCAGCATCTTCCATCGCGTCTCCGGCATCACCATAG
TCATCTCGTGACCCGCAGCATGGCAGCTTGTGATGGCGAAGAAGACCGCC
ATGCAAGGCAACTGGACATATTGCCCGTCTCTTTCCGAGATGCTTTTGAC
GAAAGTTGTGGAAACCTAAAACCTGCCCACACCCTGTCAATAGCGCCCAT
GATGGAATGGACAGACCGGCATTACCGATACATGATGCGGGGCTTGACAC
GACACACGCAGCTTTACACGGAAATGATCGTCGACAGCACGCTCCTCCAT
CGCCGGGAGGACCTAGACATCTTCCTGGGTCATGACGAGTGCGAACATCC
CTTAGCCGTCCAATTAGGCGGGTCCGATCCGGTCCAAGTCGGAGAAGCCG
CCGCTCTCTGCGAAGCCTACGGCGGTTTCAACGAGATCAATTTGAATGTC
CGTTACGCTTCTCGATAACGGATCAATGACCTTTACAGGGTTATGCCTAC
CTTCTCTTGACGCTTTTTTAGTTAGCCCTCTTCTGTCTGTCCGTGTGGGT
GCGGTGGCTGCGAAGACTCTCTCCCATCCTCATTCACCACCCC back to topprotein sequence of rna7774 >rna7774-protein ID=rna7774-protein|Name=rna7774|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp
MYYRHGHTRTWEASRGIVSAEQMRTTAPLSPSSPSHASFLLPLLFLVHVC
RQKKKMVPASKALKGALVAALASASLGLAAPVDPTTPVAPLEATTAIAPG
ECMSYQSGDANAVLCVQEAKLTAPNNLLLAGFLFNNGTVELCDVKLAPLN
APGVTAFWPDWASDASYEKYFNLKQMTSVGLTATPNADGSLPSVEIVSLR
ACDPTKDAAVPVAAEGGVEVPAEGGVEVPMEDGVATVFPLETRKIALEDS
PMMPPVKKEVLGEEPTGAGPEIVPNARRLASDKRGGRGASAGGRLWHLSE
RHREPDLVLGKRPGSHPKHGHLPRFPLQQRHGPCLRRPPSPGQCPRTDPA
VARLVAYLGL back to topmRNA from alignment at CM002473.1:345560..346996+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7774 ID=rna7774|Name=rna7774|organism=Nannochloropsis gaditana|type=mRNA|length=1437bp|location=Sequence derived from alignment at CM002473.1:345560..346996+ (Nannochloropsis gaditana)
ATGTACTACAGGCACGGACACACACGCACGTGGGAAGCATCCCGTGGAAT
AGTTTCCGCAGAACAAATGCGGACGACCGCACCGCTCAGTCCCTCATCCC
CATCCCAtgcttctttcctccttcccttgctcttccttgtccatgTCTGC
AggcaaaaaaaaaaaatggTTCCTGCTTCCAAAGCTCTCAAGGGCGCCTT
GGTCGCAGCATTGGCCTCTGCCAGCCTCGGTCTTGCCGCCCCGGTAGACC
CGACGACGCCGGTCGCCCCCCTGGAAGCCACCACCGCCATTGCGCCGGGG
GAATGCATGTCCTACCAAAGTGGGGACGCGAACGCCGTCCTTTGCGTGCA
GGAGGCCAAGCTGACCGCGCCCAACAACCTTTtggtgggtgggaggagct
gtgggggagggggaggactgTTTTCTCTTGGAGGTCTCTCTCGCTCCGGG
CGCTTTCCCTGCCGAGGTCCGGGTAGCCTTTTGTCGGGCGTTCATCGATT
CGTCTTTCCGACGCTCTTGCTTGTGTCTctgttctccttcctcgtgtcct
tcctctcccttctccctccatccgagatcctcctccccttcccctcttca
catcctccccccctttcccccccccctccctcccctccctcccctccccg
ccttccagcTGGCCGGTTTCCTCTTCAACAACGGGACCGTCGAGCTCTGC
GACGTCAAGCTCGCGCCCTTGAACGCCCCGGGGGTCACTGCCTTTTGGCC
CGACTGGGCGAGCGACGCCTCCTACGAGAAATACTTCAACTTGAAGCAGA
TGACCTCGGTGGGTCTGACAGCCACCCCCAACGCGGACGGGAGCTTGCCC
TCTGTGGAAATCGTCAGCCTCCGGGCCTGTGACCCCACCAAGGACGCCGC
GGTCCCGGtcgcggcggagggcggggtggaggtgccggcggagggcgggg
tggaggtgccgatggaggacggggtcGCCACCGTCTTCCCGTTGGAGACT
CGGAAGATTGCCTTGGAGGACTCCCCCATGATGCCCCccgtgaagaagga
ggtgctgggtGAGGAGCCGACGGGGGCCGGGCCCGAGATCGTGCCCAACG
CCCGTCGGCTGGCCAGTGaggggctggtggaggcggaggacgcgggggag
gccggggcggaggaagggccggaATTGGGGGAGGACTCAACCAAGGCGac
aagcgaggagggcgcggagcTTCTGCTGGCGGGCGATTGTGGCATTTATC
AGAACGGCACCGTGAGCCTGACCTTGTGCTTGGAAAGCGTCCTGGCTCCC
ACCCAAAGCATGGCCATCTACCACGGTTTCCTCTACAACAACGGCACGGC
CCCTGCCTGCGACGTCCGCCTTCGCCCGGTCAATGCCCCCGAACTGATCC
AGCTGTGGCCCGATTGGTCGCCTACCTCGGCCTATGA back to topCoding sequence (CDS) from alignment at CM002473.1:345560..346996+ >rna7774 ID=rna7774|Name=rna7774|organism=Nannochloropsis gaditana|type=CDS|length=3249bp|location=Sequence derived from alignment at CM002473.1:345560..346996+ (Nannochloropsis gaditana)
ATGTACTACAGGCACGGACACACACGCACGTGGGAAGCATCCCGTGGAAT
AGTTTCCGCAGAACAAATGCGGACGACCGCACCGCTCAGTCCCTCATCCC
CATCCCAtgcttctttcctccttcccttgctcttccttgtccatgTCTGC
AggcaaaaaaaaaaaatggTTCCTGCTTCCAAAGCTCTCAAGGGCGCCTT
GGTCGCAGCATTGGCCTCTGCCAGCCTCGGTCTTGCCGCCCCGGTAGACC
CGACGACGCCGGTCGCCCCCCTGGAAGCCACCACCGCCATTGCGCCGGGG
GAATGCATGTCCTACCAAAGTGGGGACGCGAACGCCGTCCTTTGCGTGCA
GGAGGCCAAGCTGACCGCGCCCAACAACCTTTtgcTGGCCGGTTTCCTCT
TCAACAACGGGACCGTCGAGCTCTGCGACGTCAAGCTCGCGCCCTTGAAC
GCCCCGGGGGTCACTGCCTTTTGGCCCGACTGGGCGAGCGACGCCTCCTA
CGAGAAATACTTCAACTTGAAGCAGATGACCTCGGTGGGTCTGACAGCCA
CCCCCAACGCGGACGGGAGCTTGCCCTCTGTGGAAATCGTCAGCCTCCGG
GCCTGTGACCCCACCAAGGACGCCGCGGTCCCGGtcgcggcggagggcgg
ggtggaggtgccggcggagggcggggtggaggtgccgatggaggacgggg
tcGCCACCGTCTTCCCGTTGGAGACTCGGAAGATTGCCTTGGAGGACTCC
CCCATGATGCCCCccgtgaagaaggaggtgctgggtGAGGAGCCGACGGG
GGCCGGGCCCGAGATCGTGCCCAACGCCCGTCGGCTGGCCAGCGacaagc
gaggagggcgcggagcTTCTGCTGGCGGGCGATTGTGGCATTTATCAGAA
CGGCACCGTGAGCCTGACCTTGTGCTTGGAAAGCGTCCTGGCTCCCACCC
AAAGCATGGCCATCTACCACGGTTTCCTCTACAACAACGGCACGGCCCCT
GCCTGCGACGTCCGCCTTCGCCCGGTCAATGCCCCCGAACTGATCCAGCT
GTGGCCCGATTGGTCGCCTACCTCGGCCTATGAATGTACTACAGGCACGG
ACACACACGCACGTGGGAAGCATCCCGTGGAATAGTTTCCGCAGAACAAA
TGCGGACGACCGCACCGCTCAGTCCCTCATCCCCATCCCAtgcttctttc
ctccttcccttgctcttccttgtccatgTCTGCAggcaaaaaaaaaaaat
ggTTCCTGCTTCCAAAGCTCTCAAGGGCGCCTTGGTCGCAGCATTGGCCT
CTGCCAGCCTCGGTCTTGCCGCCCCGGTAGACCCGACGACGCCGGTCGCC
CCCCTGGAAGCCACCACCGCCATTGCGCCGGGGGAATGCATGTCCTACCA
AAGTGGGGACGCGAACGCCGTCCTTTGCGTGCAGGAGGCCAAGCTGACCG
CGCCCAACAACCTTTtgcTGGCCGGTTTCCTCTTCAACAACGGGACCGTC
GAGCTCTGCGACGTCAAGCTCGCGCCCTTGAACGCCCCGGGGGTCACTGC
CTTTTGGCCCGACTGGGCGAGCGACGCCTCCTACGAGAAATACTTCAACT
TGAAGCAGATGACCTCGGTGGGTCTGACAGCCACCCCCAACGCGGACGGG
AGCTTGCCCTCTGTGGAAATCGTCAGCCTCCGGGCCTGTGACCCCACCAA
GGACGCCGCGGTCCCGGtcgcggcggagggcggggtggaggtgccggcgg
agggcggggtggaggtgccgatggaggacggggtcGCCACCGTCTTCCCG
TTGGAGACTCGGAAGATTGCCTTGGAGGACTCCCCCATGATGCCCCccgt
gaagaaggaggtgctgggtGAGGAGCCGACGGGGGCCGGGCCCGAGATCG
TGCCCAACGCCCGTCGGCTGGCCAGCGacaagcgaggagggcgcggagcT
TCTGCTGGCGGGCGATTGTGGCATTTATCAGAACGGCACCGTGAGCCTGA
CCTTGTGCTTGGAAAGCGTCCTGGCTCCCACCCAAAGCATGGCCATCTAC
CACGGTTTCCTCTACAACAACGGCACGGCCCCTGCCTGCGACGTCCGCCT
TCGCCCGGTCAATGCCCCCGAACTGATCCAGCTGTGGCCCGATTGGTCGC
CTACCTCGGCCTATGAATGTACTACAGGCACGGACACACACGCACGTGGG
AAGCATCCCGTGGAATAGTTTCCGCAGAACAAATGCGGACGACCGCACCG
CTCAGTCCCTCATCCCCATCCCAtgcttctttcctccttcccttgctctt
ccttgtccatgTCTGCAggcaaaaaaaaaaaatggTTCCTGCTTCCAAAG
CTCTCAAGGGCGCCTTGGTCGCAGCATTGGCCTCTGCCAGCCTCGGTCTT
GCCGCCCCGGTAGACCCGACGACGCCGGTCGCCCCCCTGGAAGCCACCAC
CGCCATTGCGCCGGGGGAATGCATGTCCTACCAAAGTGGGGACGCGAACG
CCGTCCTTTGCGTGCAGGAGGCCAAGCTGACCGCGCCCAACAACCTTTtg
cTGGCCGGTTTCCTCTTCAACAACGGGACCGTCGAGCTCTGCGACGTCAA
GCTCGCGCCCTTGAACGCCCCGGGGGTCACTGCCTTTTGGCCCGACTGGG
CGAGCGACGCCTCCTACGAGAAATACTTCAACTTGAAGCAGATGACCTCG
GTGGGTCTGACAGCCACCCCCAACGCGGACGGGAGCTTGCCCTCTGTGGA
AATCGTCAGCCTCCGGGCCTGTGACCCCACCAAGGACGCCGCGGTCCCGG
tcgcggcggagggcggggtggaggtgccggcggagggcggggtggaggtg
ccgatggaggacggggtcGCCACCGTCTTCCCGTTGGAGACTCGGAAGAT
TGCCTTGGAGGACTCCCCCATGATGCCCCccgtgaagaaggaggtgctgg
gtGAGGAGCCGACGGGGGCCGGGCCCGAGATCGTGCCCAACGCCCGTCGG
CTGGCCAGCGacaagcgaggagggcgcggagcTTCTGCTGGCGGGCGATT
GTGGCATTTATCAGAACGGCACCGTGAGCCTGACCTTGTGCTTGGAAAGC
GTCCTGGCTCCCACCCAAAGCATGGCCATCTACCACGGTTTCCTCTACAA
CAACGGCACGGCCCCTGCCTGCGACGTCCGCCTTCGCCCGGTCAATGCCC
CCGAACTGATCCAGCTGTGGCCCGATTGGTCGCCTACCTCGGCCTATGA back to top
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