rna7753, rna7753 (mRNA) Nannochloropsis gaditana

Overview
Namerna7753
Unique Namerna7753
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1639
Alignment locationCM002473.1:270614..271539 -

Link to JBrowse

Properties
Property NameValue
Productprotein phosphatase-7
Orig transcript idgnl|cribi|Naga_101732g1.4364.mrna
Orig protein idgnl|cribi|Naga_101732g1.4364
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:270614..271539 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101732g1gene7507Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22941.1cds7732Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7753rna7753-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7753 ID=rna7753|Name=rna7753|organism=Nannochloropsis gaditana|type=mRNA|length=1639bp
GGGGCCAGGCCCGCTTGGGTCTGCGGCACGTGCGCTCCCTCCGGCTGGAG
GAGGACGTGCTGGCGGTGCGGTATTCAAATACCCGGAGCCAGGCCCGGCT
CCTGGTGGCGGTTGCGCTCTTGGACTCGACCGTCAAGGTCTTCTTCGACG
ACTCCCTCAAGTTCTTCCTCTCCCTCTACGGGCACCAGCTCCCCGTCCTC
GCCCTCGACGTCTCCCACGACGATGAGCTCCTGGTCACGGCCTCGGCCGA
CCGGACCGTTAAAATCTGGGGCCTGGATTTCGGCGATTGCCACCGATCCC
TTCGAGCCCACCAGGACAGCGTGATGGCGGTCCGCTTCCTCCCCGGCACC
CACTCCTTTTTTTCGGCGGGAAAAGACAAGCTCCTTAAGTACTGGGACGC
GGACAGTTTCGAGCTGATCCTCACGCACCGAGGCCATGCGGGGGAGGTGT
GGGCGATGGGGGTGGAAGGTGGGGGGGAGGTGCTGGCCACGGGGGGGGCG
GACCGGAGCGTGCGGGTGTGGGAAAGGAGCGATGACCAGGTCTTTGTGGA
GGAGGAGAGGCAGCGAGAGCTGGAGGAGATGTTCGAGGACGGGGTGGGGA
AGGAGGGCAGGGGGGAGGAAGGGGAGGAAGGGGCGGAGAGCGGGCGGGCG
GGGCGGCAGCACCTCGAGAGCGTGAAGCAGGGGGAGCGGTTGAGCGAGGC
CTTGGAGGTGATGAGGGCGGACAATGGGCTGGAGGAGGAGCACCTTAAGT
TCCTGAAAGCCGCCCGGCAGAAACCCGGCGCCCCCCTTCCTCCCCCTCGG
GCCCCGAACCCTCTGATGCTGAACCTTCCCCCCCACCGGTTCCTCCTCTT
CCACCTCCGCCTCCTGAAGGGCCCCGACCTCGAGCAAGCCCTCCTCGTCC
TCCCCCTCGACCTCATGCACCTCCTCCTTCGCGGCCTCTGCCGCCTCCTT
AGGGAGGACATGGAGGTGGAGCTGTGCTGGCGCTGTCTCCTCTTCCTCTT
CCGAACGCATCACCGCCTCCTCCTCCACAGCCGCGACCTGATGCCCCTCC
TCATGGACCTGCGCGGCGGTCTGAGAGAGCGGTTGAAAGGGTTTCGGGAC
GGGGTGGCGATGAATGTGGAGGGGCTCCGTTTGTTGAAGAGGGAGGTGGA
GGAGGGGAAGCAAGCCTTCCTGGTCCCGGGGGAGGGAGAGGAGGAGGACG
GGGGGAAGAAGCGCATTCGGCGGGAGTGAGGGGGAAGGAAGGAGGGAGGG
GAGGGGGGGAAGGGTTTATGGGGAGGAAGGAAAGAGCAGCGTGGCGTCGC
GACGGAGTCGTGTGCTTAGGAGAAAGGGAAGGAAGCATTCGGGGCAGGAA
TGAAAACGAAGACGCCGGAGGCACCTTTTGTCTTTATTTTTTTAAACGCT
TAATGAGGATACATCCATGCGATGCGTTCCTGTACTGGTAAGTGGTGGTT
CCTGGTCATGAATTATTTCCAATCCAAATTGCATATGCCGATCTCCCTCC
TCCCTGGAGGGTCCCCGCCCTTCAACCTCCCCCTCTTCCGCGCAATCCCG
CAAGTAACGGGCGCTTCCACGTCTCTCCCGCCCTCCTTTTGCCTCTCATT
GCCTCCCTTGCCCCCGTTGAGAAGACGCCCTCTCTGTCC
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protein sequence of rna7753

>rna7753-protein ID=rna7753-protein|Name=rna7753|organism=Nannochloropsis gaditana|type=polypeptide|length=302bp
MRAVCKVQVNWESLRDLLVPRDCLVEGKGWAEGGKEVEVEGNTEGPSPVG
AEGGVEEEEEEAGREGDVEGTIEGRSKDIKGDEAEEATVPKKGGVEGGKE
GPDEGGMEGGAREVWIKYEGFLESFQVQNRRAKREGQGAQHVFDALYVNR
RQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKIL
EVDRVLELLDADRNEAISVNEFFEAFRLLDSKDGRLDGRLGEGGGEGGGE
EGGNVVKAGLLIPPTAGGAVEETLRRQAMLRRASSKLVMGREGRRSSLSM
SR
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mRNA from alignment at CM002473.1:270614..271539-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7753 ID=rna7753|Name=rna7753|organism=Nannochloropsis gaditana|type=mRNA|length=926bp|location=Sequence derived from alignment at CM002473.1:270614..271539- (Nannochloropsis gaditana)
ATGCGGGCCGTGTGCAAGGTCCAGGTGAACTGGGAGAGCTTGAGAGACCT
GCTGGTGCCCCGAGATTGCCTGGTGGAGGGGAAGGGCTGGGCGGAAGGCG
GGAAAGAGGTCGAGGTAGAGGGGAACACGGAGGGGCCGAGTCCGGTAGGG
GCGGAGGGTGGGGTGGAGGAGGAGGAGGAGGAGGCAGGGAGGGAGGGCGA
TGTGGAGGGCACGATCGAGGGCAGGTCAAAGGACATCAAAGGGGACGAGG
CGGAAGAAGCGACGGTCCCAAAAAAGGGCGGTGTAGAGGGTGGGAAGGAG
GGCCCGGATGAGGGCGGGATGGAGGGCGGGGCCCGAGAGGTGTGGATCAA
GTACGAGGGCTTCTTGGAGAGCTTCCAGGTCCAGAATCGACGGGCGAAGC
GAGAGGGCCAGGGGGCCCAGCACGTCTTCGACGCCCTCTACGTGAACCGA
CGGCAGCTGGAGGCTCTCTTTGCCTTCTTCGACAAGGACGGGGACGGGAG
CATCAGCAGGGAGGAGTTCTGCCGAGGGTGCGAGGTGGTGAACGGGTTGG
TGGAGGCGGAGGGCGGGGCGGAGGGCGGGGGGGAGGGCGGGAAGATCCTG
GAGGTGGACCGGGTGCTGGAGCTCTTAGATGCGGATCGGAACGAGGCAAT
CAGTGTGAACGAATTCTTCGAAGCCTTCCGGCTACTGGACTCCAAGGACG
GCCGTCTGGACGGGAGGCTGGGGGAGGGCGGGGGGGAGGGCGGGGGGGAG
GAAGGGGGCAACGTGGTGAAGGCGGGCCTGCTGATTCCCCCGACAGCAGG
CGGCGCCGTAGAGGAAACCTTAAGGAGACAGGCGATGCTGAGGCGAGCAT
CCTCGAAGTTAGTGATGGGGAGGGAAGGAAGGAGGAGTTCCCTGTCCATG
TCCAGGTAGGAGGAGGTCAAGGGAGG
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Coding sequence (CDS) from alignment at CM002473.1:270614..271539-

>rna7753 ID=rna7753|Name=rna7753|organism=Nannochloropsis gaditana|type=CDS|length=909bp|location=Sequence derived from alignment at CM002473.1:270614..271539- (Nannochloropsis gaditana)
ATGCGGGCCGTGTGCAAGGTCCAGGTGAACTGGGAGAGCTTGAGAGACCT
GCTGGTGCCCCGAGATTGCCTGGTGGAGGGGAAGGGCTGGGCGGAAGGCG
GGAAAGAGGTCGAGGTAGAGGGGAACACGGAGGGGCCGAGTCCGGTAGGG
GCGGAGGGTGGGGTGGAGGAGGAGGAGGAGGAGGCAGGGAGGGAGGGCGA
TGTGGAGGGCACGATCGAGGGCAGGTCAAAGGACATCAAAGGGGACGAGG
CGGAAGAAGCGACGGTCCCAAAAAAGGGCGGTGTAGAGGGTGGGAAGGAG
GGCCCGGATGAGGGCGGGATGGAGGGCGGGGCCCGAGAGGTGTGGATCAA
GTACGAGGGCTTCTTGGAGAGCTTCCAGGTCCAGAATCGACGGGCGAAGC
GAGAGGGCCAGGGGGCCCAGCACGTCTTCGACGCCCTCTACGTGAACCGA
CGGCAGCTGGAGGCTCTCTTTGCCTTCTTCGACAAGGACGGGGACGGGAG
CATCAGCAGGGAGGAGTTCTGCCGAGGGTGCGAGGTGGTGAACGGGTTGG
TGGAGGCGGAGGGCGGGGCGGAGGGCGGGGGGGAGGGCGGGAAGATCCTG
GAGGTGGACCGGGTGCTGGAGCTCTTAGATGCGGATCGGAACGAGGCAAT
CAGTGTGAACGAATTCTTCGAAGCCTTCCGGCTACTGGACTCCAAGGACG
GCCGTCTGGACGGGAGGCTGGGGGAGGGCGGGGGGGAGGGCGGGGGGGAG
GAAGGGGGCAACGTGGTGAAGGCGGGCCTGCTGATTCCCCCGACAGCAGG
CGGCGCCGTAGAGGAAACCTTAAGGAGACAGGCGATGCTGAGGCGAGCAT
CCTCGAAGTTAGTGATGGGGAGGGAAGGAAGGAGGAGTTCCCTGTCCATG
TCCAGGTAG
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Synonyms
Publications