EWM22941.1, cds7732 (CDS) Nannochloropsis gaditana

Overview
NameEWM22941.1
Unique Namecds7732
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:270631..271539 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22941.1
Productprotein phosphatase-7
Orig transcript idgnl|cribi|Naga_101732g1.4364.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:270631..271539 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
Homology
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|585103668|gb|EWM22941.1| (protein phosphatase-7 [Nannochloropsis gaditana])

HSP 1 Score: 580.867 bits (1496), Expect = 0.000e+0
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0
Query:    1 MRAVCKVQVNWESLRDLLVPRDCLVEGKGWAEGGKEVEVEGNTEGPSPVGAEGGVEEEEEEAGREGDVEGTIEGRSKDIKGDEAEEATVPKKGGVEGGKEGPDEGGMEGGAREVWIKYEGFLESFQVQNRRAKREGQGAQHVFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSKDGRLDGRLGEGGGEGGGEEGGNVVKAGLLIPPTAGGAVEETLRRQAMLRRASSKLVMGREGRRSSLSMSR 302
            MRAVCKVQVNWESLRDLLVPRDCLVEGKGWAEGGKEVEVEGNTEGPSPVGAEGGVEEEEEEAGREGDVEGTIEGRSKDIKGDEAEEATVPKKGGVEGGKEGPDEGGMEGGAREVWIKYEGFLESFQVQNRRAKREGQGAQHVFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSKDGRLDGRLGEGGGEGGGEEGGNVVKAGLLIPPTAGGAVEETLRRQAMLRRASSKLVMGREGRRSSLSMSR
Sbjct:    1 MRAVCKVQVNWESLRDLLVPRDCLVEGKGWAEGGKEVEVEGNTEGPSPVGAEGGVEEEEEEAGREGDVEGTIEGRSKDIKGDEAEEATVPKKGGVEGGKEGPDEGGMEGGAREVWIKYEGFLESFQVQNRRAKREGQGAQHVFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSKDGRLDGRLGEGGGEGGGEEGGNVVKAGLLIPPTAGGAVEETLRRQAMLRRASSKLVMGREGRRSSLSMSR 302          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|299117042|emb|CBN73813.1| (protein phosphatase 5, catalytic subunit variant [Ectocarpus siliculosus])

HSP 1 Score: 113.62 bits (283), Expect = 1.539e-24
Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 0
Query:  116 IKYEGFLESFQVQNRRAKREGQGAQ-HVFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSKDGRLDGRLG 241
            I +  F+  F V+      +G G    +FDA+Y +R +LEA+F FFD DG+GSISREEF RGCE++N         +  GEG  +  +D +L ++D D N++I +NEFFE FRL+D+ DG +DG+ G
Sbjct:  468 INWRAFMSKFHVKLSARASKGVGKNVAMFDAMYADREKLEAIFRFFDTDGNGSISREEFHRGCELLN---------QQAGEGEYLENIDVILGVMDMDNNDSIDINEFFEVFRLVDAADGTVDGKYG 585          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|698778851|ref|XP_009822469.1| (hypothetical protein, variant 3 [Aphanomyces astaci] >gi|574122129|gb|ETV87605.1| hypothetical protein, variant 3 [Aphanomyces astaci])

HSP 1 Score: 82.8037 bits (203), Expect = 5.295e-14
Identity = 47/118 (39.83%), Postives = 65/118 (55.08%), Query Frame = 0
Query:  116 IKYEGFLESFQVQNRRAKREGQGAQH-VFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSK 232
            I Y  FL SF     RA  EG    H VFDALY +R+ LEA+F FFD+D  G IS +EF RGC ++N  + +    +             +   +D D   +IS+N+FFEAFR++D +
Sbjct:  516 INYVKFLASF-----RAVYEGHREWHGVFDALYPHRKALEAIFCFFDRDQSGQISMDEFKRGCLLLNDHLPSPDRWKDPIA---------LFRDIDIDGTRSISINKFFEAFRIIDKQ 619          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|673015098|ref|XP_008861510.1| (hypothetical protein, variant 3 [Aphanomyces invadans] >gi|574483110|gb|ETW10101.1| hypothetical protein, variant 3 [Aphanomyces invadans])

HSP 1 Score: 75.8702 bits (185), Expect = 1.160e-11
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0
Query:  121 FLESFQVQNRRAKREGQGAQH-VFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDS 231
            FL SF      A  EGQ     VFDALY +R+ LEA+F FFD+D  G+IS +EF +GC ++N         E      +  +   +   +D D   AIS+N+FFEAFR++DS
Sbjct:  523 FLSSFC-----AVYEGQPEWRGVFDALYPHRKALEAIFCFFDRDHSGAISMDEFKQGCLLLN---------EHLPLSDRWKDPIALFRDMDIDGTRAISINKFFEAFRIVDS 620          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|673015106|ref|XP_008861514.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574483109|gb|ETW10100.1| hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 75.485 bits (184), Expect = 1.228e-11
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0
Query:  121 FLESFQVQNRRAKREGQGAQH-VFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDS 231
            FL SF      A  EGQ     VFDALY +R+ LEA+F FFD+D  G+IS +EF +GC ++N         E      +  +   +   +D D   AIS+N+FFEAFR++DS
Sbjct:  525 FLSSFC-----AVYEGQPEWRGVFDALYPHRKALEAIFCFFDRDHSGAISMDEFKQGCLLLN---------EHLPLSDRWKDPIALFRDMDIDGTRAISINKFFEAFRIVDS 622          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|698778843|ref|XP_009822465.1| (hypothetical protein H257_01121 [Aphanomyces astaci] >gi|574122126|gb|ETV87602.1| hypothetical protein H257_01121 [Aphanomyces astaci])

HSP 1 Score: 75.0998 bits (183), Expect = 1.921e-11
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 0
Query:  131 RAKREGQGAQHVFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSK 232
            R  RE  G   VFDALY +R+ LEA+F FFD+D  G IS +EF RGC ++N  + +    +             +   +D D   +IS+N+FFEAFR++D +
Sbjct:  550 RRHREWHG---VFDALYPHRKALEAIFCFFDRDQSGQISMDEFKRGCLLLNDHLPSPDRWKDPIA---------LFRDIDIDGTRSISINKFFEAFRIIDKQ 639          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|673015104|ref|XP_008861513.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574483108|gb|ETW10099.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 74.7146 bits (182), Expect = 2.600e-11
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0
Query:  142 VFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDS 231
            VFDALY +R+ LEA+F FFD+D  G+IS +EF +GC ++N         E      +  +   +   +D D   AIS+N+FFEAFR++DS
Sbjct:  557 VFDALYPHRKALEAIFCFFDRDHSGAISMDEFKQGCLLLN---------EHLPLSDRWKDPIALFRDMDIDGTRAISINKFFEAFRIVDS 637          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|673015096|ref|XP_008861509.1| (hypothetical protein H310_00480 [Aphanomyces invadans] >gi|574483107|gb|ETW10098.1| hypothetical protein H310_00480 [Aphanomyces invadans])

HSP 1 Score: 74.7146 bits (182), Expect = 2.652e-11
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0
Query:  142 VFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDS 231
            VFDALY +R+ LEA+F FFD+D  G+IS +EF +GC ++N         E      +  +   +   +D D   AIS+N+FFEAFR++DS
Sbjct:  559 VFDALYPHRKALEAIFCFFDRDHSGAISMDEFKQGCLLLN---------EHLPLSDRWKDPIALFRDMDIDGTRAISINKFFEAFRIVDS 639          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|669155816|ref|XP_008613470.1| (hypothetical protein SDRG_09323 [Saprolegnia diclina VS20] >gi|530735105|gb|EQC33347.1| hypothetical protein SDRG_09323 [Saprolegnia diclina VS20])

HSP 1 Score: 74.7146 bits (182), Expect = 2.752e-11
Identity = 39/120 (32.50%), Postives = 64/120 (53.33%), Query Frame = 0
Query:  116 IKYEGFLESFQVQNRRAKREGQGAQHVFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSKDGR 235
            ++Y  FLES+Q     A+    G Q   D  Y+ R++L+ +F FFDKD  G I+ +EF +GC ++N        A    E  ++  +  + + LD      IS+N F EAFR+ ++++ R
Sbjct:  519 VEYAVFLESYQ--TTYAQHGDAGGQLDLDTFYMYRKELQVIFCFFDKDNSGYITLDEFQQGCALLN--------AHVADEDAQLHNIATLFQELDLQGTGKISINAFLEAFRITNARETR 628          
BLAST of EWM22941.1 vs. NCBI_GenBank
Match: gi|813133677|ref|XP_012197900.1| (hypothetical protein SPRG_03917 [Saprolegnia parasitica CBS 223.65] >gi|641537448|gb|KDO31301.1| hypothetical protein SPRG_03917 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 73.1738 bits (178), Expect = 7.319e-11
Identity = 39/120 (32.50%), Postives = 64/120 (53.33%), Query Frame = 0
Query:  116 IKYEGFLESFQVQNRRAKREGQGAQHVFDALYVNRRQLEALFAFFDKDGDGSISREEFCRGCEVVNGLVEAEGGAEGGGEGGKILEVDRVLELLDADRNEAISVNEFFEAFRLLDSKDGR 235
            ++Y  FLES+Q  +  A+    G Q   D  Y+ R++L+ +F FFDKD  G I+ +EF +GC ++N        A    E  ++  +  + + LD      IS+N F EAFR+ + ++ R
Sbjct:  377 VEYAIFLESYQTNH--AQNGDTGGQLDLDTFYMYRKELQVIFCFFDKDNSGYITLDEFQQGCALLN--------AHVADEDAQLHNIATLFQELDLQGTGKISINAFLEAFRITNDREIR 486          
The following BLAST results are available for this feature:
BLAST of EWM22941.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103668|gb|EWM22941.1|0.000e+0100.00protein phosphatase-7 [Nannochloropsis gaditana][more]
gi|299117042|emb|CBN73813.1|1.539e-2444.09protein phosphatase 5, catalytic subunit variant [... [more]
gi|698778851|ref|XP_009822469.1|5.295e-1439.83hypothetical protein, variant 3 [Aphanomyces astac... [more]
gi|673015098|ref|XP_008861510.1|1.160e-1141.07hypothetical protein, variant 3 [Aphanomyces invad... [more]
gi|673015106|ref|XP_008861514.1|1.228e-1141.07hypothetical protein, variant 2 [Aphanomyces invad... [more]
gi|698778843|ref|XP_009822465.1|1.921e-1139.22hypothetical protein H257_01121 [Aphanomyces astac... [more]
gi|673015104|ref|XP_008861513.1|2.600e-1142.22hypothetical protein, variant 1 [Aphanomyces invad... [more]
gi|673015096|ref|XP_008861509.1|2.652e-1142.22hypothetical protein H310_00480 [Aphanomyces invad... [more]
gi|669155816|ref|XP_008613470.1|2.752e-1132.50hypothetical protein SDRG_09323 [Saprolegnia dicli... [more]
gi|813133677|ref|XP_012197900.1|7.319e-1132.50hypothetical protein SPRG_03917 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7753rna7753Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications