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Properties
| Property Name | Value |
|---|
| Product | beta transducin trp-asp domain-containing |
| Orig transcript id | gnl|cribi|Naga_101805g1.184.mrna |
| Orig protein id | gnl|cribi|Naga_101805g1.184 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:268731..270369 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7752 ID=rna7752|Name=rna7752|organism=Nannochloropsis gaditana|type=mRNA|length=2489bp
GTACAAACCTCAAGCCTTTAATGCCATTCTCTGAGGAGTGGCGTTAAGTA
ACAAGGACGAGGGGTATCGTGACAGCGTCAGGCATGAGGTTTTGATTGGT
GCGTGCGCCAACGAAAATTTCTCCTCAGGGTAAAGTGTCGAGCCTGCAAC
AGGTTGCCGCAATGGCGAGAAGTAACCGGGAGGGGGCTTTCTCATCGCTC
CCCTCGATAGAAAAGTGGGCCACGCAGCAACGTGCAGCATTAAAAGAGGA
GCGAGAGGCAGAACGACAAGAAGTGACAGCGGCTTTGGCTCAGCTTACAC
CCCAAGAATGTCAGGAAAAAGGCGTTTCTCTTCTCCATCTGAACATCGCG
GGCATAAGCACGGGTCTATACGCGCGCAAATGCATCAGTCTGGGGGCCTC
CACGGCCGTGCGAAAGGACGGAAGCTTGCCTGCGCATGGCTTTGGGGCCG
GTGACGAGGTCGTGCTGCGGTCCATGAAAGGCAGCAGCAGTAAAGGTTCG
GGGGCGGGGGCCACTGGGAGTGAACGGATCACCGGTGTGATTGCGCGGAC
CACAGGCGGCAGAGTGGACATGGTTGCCTCCACAGAGGACTTGGACAGCG
ACCTTTTGGAGGGCTGGGCCGCAGGGGGCCCGGGTAGCGGGCATCTGCGC
CTGGACATGCTCTCGAACGAGAGCACGCACGAGAAGATGCTGCAAGCTGT
GGAGGACGTCTGCAACTACCCGGCCGACGGCCCTGCGGCCCGGATCATCG
ACATGTGTTTCGGCGGTCGTGCCTGCCTCGGGACCCTCCCCCCCGTTCCC
AAGACTGCCCCTACCCAGCTCCCTCCCGACGGCCCTTCCTACTCGGGCGC
CGTCCTGAACGACGCTCAGCGGGCCGCCGTCACCTTAGGGATGAGCACTG
AGGACGTGGCCTTGATCCACGGCCCTCCCGGCACGGGCAAGACCACCGCC
GTGGTAGAGCTGATCCTGCAGGCGGTGCGCCGGCAGCAGCGCCGGGTCTT
GGTCTGTGCCCCGTCGAACGTGGCCGTCGACAACATCGCCGAGCGCTTAG
CCCTGGCGCCCCCTCCACCGCTCCCTCCCTCCTCCTCCACCGCCCCCCCG
CCCCCCCGCACGGAGCTGTCCAAGCGGCCCGTCCGTATCGTCCGCCTCGG
TCACCCCGCCCGCCTCGCCCCCGCCACCCAGGCCTACTCCCTGGAGGCCC
TGGTGGAGGGAGCGGACGGGACCGCCCTAGTCCGTGACATCCGGGCCGAG
CTCGCGGCCTTGGAGCGACGCGGGGTCTCCCCCAAGACACCGCAGCTGCG
AGAAGCACGGAGGCAATGGCGGAGCGAAACCAGGGCTTTGCGACGGGAGC
TCCGGACGCGGGAGGCGCGGGTGGTGGGGGAGGTGGTGTCGTCGCGGGAG
GTGGTCCTGTGCACCTGTGTGGGGGCGGGGGCCCGGGTCTTGCGGGAGGA
GCGCTTCGACCTGGTCGTGATCGACGAGGCCGCGCAAGCTCTGGAAGCCG
CCTGCTGGATCCCCATCCAACGGGGCGGGCGGGTGGTGCTGGCGGGGGAC
CACAAGCAGCTCGCGCCCACGGTCAAGAGCGGGCGGGCGGAGGCCTTGGG
TCTGGGGGTGACGCTCTTCGACCGGCTCATGCGGGAGGACGGGTTCGGGG
GGCCGGCGGGGGGGCGGGCCTGCATGCTCCAGGTCCAGTACCGGATGCAT
GCGGACATATGTGCATGGGCGTCCCGGGCGATGTACCAAGGGCGCTTGCG
AGCCGACCCCTCCGTGGCCGGGAGGACGCTGGCGGGGCTGGGGAAGGGCG
AGAGGGAGGACGGGGAAGAGGACGGGGACGAGGACATGACGGAGGCAGTC
TTGTTGTTCCTGGACACGGCGGGGTGCGGGATGGAGGAGGAAGAAGGGGA
AAGACCCCCCTCTCCCCCGCCCTCCTCCCCCTCCTCCTCCCCCTCCCGGC
CACGCGCTCCCAAAAAAACCGTGCGCGCCCGCAGCCTCCTAAGCTCTTCT
CGGGCCAACGAGGGCGAGGCTCAGGTCGTGGCGGCCCATGTCCAGGCCTT
ACTCCGCCGCACCGGCCTCGCCCCCGCCGACGTGGCCGTCATCACGCCCT
ACAACGCCCAGGTGGAGCGCCTCCGCTCGCTGTTGCACCCGCAGTACCCG
GATCTGCAGGTCCGATCCGTGGACGGCTTCCAAGGCGGGGAACGGGAGGC
AGTGGTGCTCTCCTTGGTCCGGAGCAATCTCCGAGGCGAGGTGGGCTTTC
TCCGGGACGACCGGCGGTTGAACGTGGCCGTTACTCGGGCGAAACGGCAC
TGTTGCCTGGTCGGGGACTCGGAAACGGTGGGGAGGCACCCCTTCCTGGC
CTCCTTGCTCCAGCATTGTGAGGAGGTGGGGCAGATCCGATCAGCCATGG
AGTACCTCCCGGAGTGGGGAGGGGGCGGAGGAGGGGGAGGGAGGGGCGCG
GAGGAGGGAAGGGAATCCAGGGAGCGGTCGACAGCGTAA back to topprotein sequence of rna7752 >rna7752-protein ID=rna7752-protein|Name=rna7752|organism=Nannochloropsis gaditana|type=polypeptide|length=301bp
MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGG
GEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGEEG
EEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQK
PGAPLPPPRAPNPLMLNLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHL
LLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGL
RERLKGFRDGVAMNVEGLRLLKREVEEGKQAFLVPGEGEEEDGGKKRIRR
E back to topmRNA from alignment at CM002473.1:268731..270369+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7752 ID=rna7752|Name=rna7752|organism=Nannochloropsis gaditana|type=mRNA|length=1639bp|location=Sequence derived from alignment at CM002473.1:268731..270369+ (Nannochloropsis gaditana)
GGGGCCAGGCCCGCTTGGGTCTGCGGCACGTGCGCTCCCTccggctggag
gaggacgtgctggcGGTGCGGTATTCAAATACCCGGAGCCAGGCCCGGCT
CCTGGTGGCGGTTGCGCTCTTGGACTCGACCGTCAAGGTCTTCTTCGACG
ACTCCCTCAagttcttcctctccctctacgGGCACCagctccccgtcctc
gccctcgacgtCTCCCACGACGATGAGCTCCTGGTCACGGCCTCGGCCGA
CCGGACCGTTAAAATCTGGGGCCTGGATTTCGGCGATTGCCACCGATCCC
TTCGAGCCCACCAGGACAGCGTGATGGCggtccgcttcctccccggcacc
CACTCCTTTTTTTCGGCGGGAAAAGACAAGCTCCTTAAGTACTGGGACGC
GGACAGTTTCGAGCTGATCCTCACGCACCGAGGCCATGCGGGGGAGGTGT
GGGCGATGGGGgtggaaggtgggggggaggtgctggccacggggggggcg
gaccgGAGCGTGCGGGtgtgggaaaggagcgatGACCAGGTctttgtgga
ggaggagaggcagcgagagctggaggagatgttcgaggacggggtgggga
aggagggcaggggggaggaaggggaggaaggggcggagagcgggcgggcg
gggcggcaGCACCTCGAGAGCGTGAAGCAGGGGGAGCGGTTgagcgaggc
cttggaggtgaTGAGGGCGGACAatgggctggaggaggagcacctTAAGT
TCCTGAAAGCCGCCCGGCAGAAACCCggcgccccccttcctccccctcgg
gcCCCGAACCCTCTGATGCTgaaccttcccccccaccggttcctcctctt
ccacctccgcctcctgaaGGGCCCCGACCTCGAGcaagccctcctcgtcc
tccccctcgacctcatgcacctcctccttcgcggcctctgccgcctcctt
agggaggacatggaggtggagctgtGCTGGCgctgtctcctcttcctctt
ccgaacgcatcaccgcctcctcctccacagccgCGACCTGATGCCCCTCC
TCATGGACCTGCGCGGCGGTCTGAGAGAGCGGTTGAAAGGGTTTCGGGAC
GGGGTGGCGATGAATGTGGAGGGGCTCCGTTtgttgaagagggaggtgga
ggaggggaagcaagcCTTCCTGgtcccgggggagggagaggaggaggacg
gggggaagaagcgcaTTCGGCgggagtgagggggaaggaaggagggaggg
gagggggggaagggtttatggggaggaaggaaagagcagcGTGGCGTCGC
GACGGAGTCGTGTGCttaggagaaagggaaggaagcattCGGGGCAGGAA
TGAAAACGAAGACGCCGGAGGCACCTTTTGTCTTTATTTTTTTAAACGCT
TAATGAGGATACATCCATGCGATGCGTTCCTGTACTGGTAAGTGGTGGTT
CCTGGTCATGAATTATTTCCAATCCAAATTGCATATGccgatctccctcc
tccctggaggGTCCCCgcccttcaacctccccctcttccgcgcAATCCCG
CAAGTAACGGGCGCTTCCAcgtctctcccgccctccttttgcCTCTCAtt
gcctcccttgcccccgtTGAGAAGACGccctctctgtcc back to topCoding sequence (CDS) from alignment at CM002473.1:268731..270369+ >rna7752 ID=rna7752|Name=rna7752|organism=Nannochloropsis gaditana|type=CDS|length=906bp|location=Sequence derived from alignment at CM002473.1:268731..270369+ (Nannochloropsis gaditana)
ATGGCggtccgcttcctccccggcaccCACTCCTTTTTTTCGGCGGGAAA
AGACAAGCTCCTTAAGTACTGGGACGCGGACAGTTTCGAGCTGATCCTCA
CGCACCGAGGCCATGCGGGGGAGGTGTGGGCGATGGGGgtggaaggtggg
ggggaggtgctggccacggggggggcggaccgGAGCGTGCGGGtgtggga
aaggagcgatGACCAGGTctttgtggaggaggagaggcagcgagagctgg
aggagatgttcgaggacggggtggggaaggagggcaggggggaggaaggg
gaggaaggggcggagagcgggcgggcggggcggcaGCACCTCGAGAGCGT
GAAGCAGGGGGAGCGGTTgagcgaggccttggaggtgaTGAGGGCGGACA
atgggctggaggaggagcacctTAAGTTCCTGAAAGCCGCCCGGCAGAAA
CCCggcgccccccttcctccccctcgggcCCCGAACCCTCTGATGCTgaa
ccttcccccccaccggttcctcctcttccacctccgcctcctgaaGGGCC
CCGACCTCGAGcaagccctcctcgtcctccccctcgacctcatgcacctc
ctccttcgcggcctctgccgcctccttagggaggacatggaggtggagct
gtGCTGGCgctgtctcctcttcctcttccgaacgcatcaccgcctcctcc
tccacagccgCGACCTGATGCCCCTCCTCATGGACCTGCGCGGCGGTCTG
AGAGAGCGGTTGAAAGGGTTTCGGGACGGGGTGGCGATGAATGTGGAGGG
GCTCCGTTtgttgaagagggaggtggaggaggggaagcaagcCTTCCTGg
tcccgggggagggagaggaggaggacggggggaagaagcgcaTTCGGCgg
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