EWM22942.1, cds7731 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|585103670|gb|EWM22942.1| (beta transducin trp-asp domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGEEGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQAFLVPGEGEEEDGGKKRIRRE 301
MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGEEGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQAFLVPGEGEEEDGGKKRIRRE
Sbjct: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGEEGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQAFLVPGEGEEEDGGKKRIRRE 301
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|632956639|ref|XP_007894057.1| (PREDICTED: WD repeat-containing protein 3 [Callorhinchus milii]) HSP 1 Score: 198.749 bits (504), Expect = 6.059e-54 Identity = 107/280 (38.21%), Postives = 167/280 (59.64%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKE-GRGEEGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLML---NLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVE 276
M +RF+ TH FF+AGKD+ +K WDAD FE I T GH GEVW + + G+ + + D+S+R+WER+ + + +EEER+ + E +E+ V KE G GE+ E+G AG++ +E+VK ER+ EA+E+ R + EEH + A ++ G LPPP NP++ N+ P R++L +R +K +LE++LLVLP LL ++ +EVEL RCL FL R H + ++ L+ ++ LR ++ RD + N+ GL+ L+RE+E
Sbjct: 632 MCLRFVAKTHLFFTAGKDRKVKQWDADKFEHIQTLEGHHGEVWCLAISPNGDHVVSSAHDKSLRLWERTRETIILEEEREMQREAEYEESVAKESGPVVPGEQEGEAGLAGKKTIETVKATERIMEAIELYREETTKLEEH----REACKRAGKELPPP--TNPILTAYGNISPSRYVLDVIRKVKSSELEESLLVLPFSYTPDLLTLFNEYIQHSLEVELICRCLFFLLRIHFGQITGNQMLLTVMDSLRQNTIGKINAMRDVMGFNLAGLQFLQREIE 905
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|973192027|ref|XP_015219591.1| (PREDICTED: WD repeat-containing protein 3 [Lepisosteus oculatus]) HSP 1 Score: 193.356 bits (490), Expect = 3.772e-52 Identity = 108/284 (38.03%), Postives = 168/284 (59.15%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGEE----GEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLML---NLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEE 277
M ++F+P TH FF+AGKDK +K WDAD FE + T GH EVW + V G+ + + D+S+R+WER+ + + +EEE++ E +E+ + K G+E GE E+G AG++ +E+VK ER+ EALE+ R + EEH AA G LPPP +P+++ N+ P +++L +R ++ +LE++LLVLP + LL +R +EVEL RCL FL R H + S+ L+ ++ DLR R++ RD + N+ GL+ L+RE+E
Sbjct: 581 MFLQFVPKTHLFFTAGKDKKIKQWDADKFEHVQTLEGHHREVWCLAVSPSGDYVVSSAHDKSLRLWERTREPIILEEEKEMAREAEYEESLAK---GDEPVVPGETQGEAGLAGKKTIETVKAAERIMEALELYREETRKLEEH----SAACSAAGRKLPPP-TMSPILVAFGNISPSQYVLDVIRKVRSSELEESLLVLPFSYVPDLLSLFNEFIRGGLEVELVCRCLFFLLRIHFGQITSSQMLLTVIDDLRKNTISRVRQIRDILGFNIAGLQFLQREIEN 856
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|942166478|ref|XP_014346288.1| (PREDICTED: WD repeat-containing protein 3 [Latimeria chalumnae]) HSP 1 Score: 192.586 bits (488), Expect = 8.614e-52 Identity = 104/285 (36.49%), Postives = 171/285 (60.00%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRG-EEGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLML---NLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQA 281
M+++F+P TH FF+AGKD+ +K WDA+ FELI T GH EVW + V G+ + + D+S+R+WER+ + + +EEER+ + E +E+ V + R GE E+ AG++ +E+VK ER+ EA+E+ R + EEH K A G +PPP A NP++L +L P R++L + ++ +LE++LLVLP + LL ++ ++VEL RCLLFL R H + ++ L+ ++ ++ R++ RD + N+ GL+ L+RE+E+ +Q
Sbjct: 633 MSLQFVPKTHLFFTAGKDRKIKQWDAEKFELIQTLEGHHQEVWTVAVSANGDHIVSSSHDKSLRLWERTREPLILEEEREMQREAEYEESVAQGARSVVPGETQGEASLAGKKSIETVKAAERIIEAIEIYREETKKLEEHRSICKVA----GKEVPPP-AVNPILLAYGSLSPSRYVLEVFKKVRSSELEESLLVLPFSYVPDLLTLFDEYIQLSLDVELVCRCLLFLLRIHFGQITSNQLLLTVMERIKRNTVGRVQQIRDVLGFNMAGLQFLQREIEDSEQV 912
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|1005496433|ref|XP_015750807.1| (PREDICTED: WD repeat-containing protein 3-like, partial [Acropora digitifera]) HSP 1 Score: 184.882 bits (468), Expect = 3.137e-51 Identity = 111/286 (38.81%), Postives = 169/286 (59.09%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGE---EGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQAFL 283
M V+F+P TH FFS KDK LKYWDAD FE I T +GH EVW + V G+ +ATG DRS+R+WER+++ +FVEEER+ E E E+ + + E E AE+ +AG++ LE+V ERL EA+E+ + EE LK + + + P+ N+ P R++L L+ ++ +LE+AL+VLP ++ +L L + L+ EVEL RCL FL R HH ++ +R L+P++ LR + R+ RD + N+ GLR ++ E+E +++F
Sbjct: 196 MGVQFVPKTHYFFSVSKDKTLKYWDADKFEQITTLKGHYAEVWCLAVSPNGDHVATGSHDRSLRLWERTEEPLFVEEERELEREREHEESIAQNTERVIPGETEAEAEAVKAGKKTLETVMAAERLMEAIELYK------EETLKMNEEGKSRSSHPVLVAYG------NVTPVRYVLEVLKKIRSSELEEALIVLPFSVVIEMLTLLNQWLQCGWEVELSCRCLSFLLRIHHGQIVSNRVLVPVIDSLRKHAKSRVHELRDTIGFNLAGLRFIQGEMEARQESFF 469
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|676490387|ref|XP_009065252.1| (hypothetical protein LOTGIDRAFT_184187 [Lottia gigantea] >gi|556095473|gb|ESO84126.1| hypothetical protein LOTGIDRAFT_184187 [Lottia gigantea]) HSP 1 Score: 189.889 bits (481), Expect = 6.632e-51 Identity = 112/280 (40.00%), Postives = 166/280 (59.29%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRG-EEGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLP-PPRAPNPLMLNL-PPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEE 277
M V+F+P TH FFS KDK LK WDADSFE ILT GH E+W + V G +AT D+S+R+WER+ + + +EEER+ E E+ + VG+ G GE E G AG++ +E+VK ERL EA+EV + ++G E H + K + G LP PP+ P + N P+ ++L L+ +K +LE++LLV+P + LL+ L + L E EL RCL FL R H ++ ++ L+P++ LR R+ RD + N+ GL+ LKR++E+
Sbjct: 619 MCVQFVPNTHLFFSGSKDKKLKQWDADSFEHILTLEGHHAEIWTLAVSTRGNFVATASHDKSLRLWERTQEPLILEEEREMEREKEIDQQVGQSGEPVVAGETTNEVGLAGKKSIETVKAAERLMEAIEVYKDESGKLELHEEDCK----RTGKQLPKPPKHPLLIAFNSESPNHYMLDSLKKIKSSELEESLLVMPFSYVTDLLKILDKFLTFGWETELVCRCLFFLLRVHQGEIISNQILLPIVDRLRTVTSNRVNQLRDQIGFNMAGLQFLKRKLED 894
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|470520302|ref|XP_004353577.1| (WD repeat protein WDR3, putative [Acanthamoeba castellanii str. Neff] >gi|440803137|gb|ELR24049.1| WD repeat protein WDR3, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 187.193 bits (474), Expect = 7.223e-50 Identity = 108/298 (36.24%), Postives = 169/298 (56.71%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKE-GRGEEGEEGAESGRAGRQHLESVKQGERLSEAL---------------EVMRADNGLE-EEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQA 281
M+V+F+P TH FFS GKDK +KYWDAD FE I T H EVW + + G LATG DRS+RVWE++D+QVF++EE+ +++E +FE + RG+ E +ESG AG++ + ++K GERL+EA+ E++ A+ + EEH K R G PL P P+ +L + P ++L L+ ++ +L++ALL+LP ++ L RE EV+L RCL ++ R + + ++DL P+L+ L+ +R L+ +D V N + L+ +E A
Sbjct: 675 MSVQFVPNTHYFFSCGKDKTVKYWDADKFEHIFTLDAHHAEVWTLALSSQGHFLATGSHDRSLRVWEQTDEQVFLDEEKDKQMEAIFEQSLENPLERGKADE--SESGSAGKRTIGTIKAGERLAEAIELAEAEKAKLAHYRAELLEAEKVISPEEHAK-----RTAGGKPLIAPPPPDIHLLGMSPSAYVLKTLKDIRPSELDEALLILPFSIVVTFFHYLESWAREGKEVDLVARCLFYMLRIYQAQIGVTKDLRPVLLSLQKHVRAALQTHKDVVGFNKAAMAYLRSNIELSSSA 965
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|597784339|ref|XP_007255678.1| (PREDICTED: WD repeat-containing protein 3 [Astyanax mexicanus]) HSP 1 Score: 182.57 bits (462), Expect = 1.295e-48 Identity = 110/284 (38.73%), Postives = 172/284 (60.56%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGEE----GEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLML---NLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEE 277
M ++F+P TH FF+AGKD+ +K WDAD FE I T GH GEVW + + G+ + + D+S+R+WER+ + + +EEE++ E E FE+ +GK GEE GE E+ AG++ +E+VK ER+ EALE+ R ++ EEH KAA + G LPPP+ NP+++ N+ P R++L ++ ++ +LE +LLVLP + LL +++ +EVEL RCL FL R H + + L+ ++ DLR +++ RD + N GL+ L+RE+E
Sbjct: 477 MFLQFVPKTHLFFTAGKDRKIKQWDADKFEHIQTLEGHKGEVWCLAISPSGDYVVSSSHDKSLRLWERTREPIILEEEKEMEREAEFEESLGK---GEEPVVPGETKGEAEPAGKKTIETVKAAERIMEALELYREESKKLEEH----KAACEAAGKQLPPPKT-NPILVAFGNISPSRYVLDVIKKVRSSELEVSLLVLPFPYIPDLLSLFNSYVQQGLEVELVCRCLFFLLRIHFGQITSNHMLLSVIDDLRTNTISKVREIRDVLGFNSAGLQFLQREIES 752
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|241831475|ref|XP_002414853.1| (beta transducin Trp-Asp domain-containing protein, putative [Ixodes scapularis] >gi|215509065|gb|EEC18518.1| beta transducin Trp-Asp domain-containing protein, putative [Ixodes scapularis]) HSP 1 Score: 181.415 bits (459), Expect = 6.763e-48 Identity = 115/287 (40.07%), Postives = 166/287 (57.84%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGKEGRGEEGEEGA-ESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLML---NLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQAFL 283
M ++FLP TH FF+ KD +K WDAD+F+ ++T GH GEVWA+G+ G+ LAT DRS+R+W ++D+ + +EEER+ E E FE E E G E G A ++ +E+VK ERL EA++V + + EE+ LK + P P AP+PLM P R++L LR ++ +LE+ LLVLP + LL+ L LL + EVELC RCL FL R H + + L+P++ LR +RL RD V N+ GLR L+RE++ ++ L
Sbjct: 626 MCLQFLPKTHMFFTGSKDARIKQWDADNFQKVVTLEGHQGEVWALGISPNGKFLATASHDRSLRLWLKTDEPLVLEEERENEREAEFEASSNLEEAVIPREGGKDEVGLAAKKTVETVKIAERLLEAIDVYKEEKAKLEEYTALLKTNSKDP----PQRPAPHPLMTVYQTTCPERYMLETLRRIRYSELEETLLVLPFGYVIELLKALSELLSRNWEVELCCRCLFFLLRVHSGQIGATSALVPVVDRLRLATLDRLGSARDAVGFNLAGLRFLQRELDSREEVAL 908
BLAST of EWM22942.1 vs. NCBI_GenBank
Match: gi|260835252|ref|XP_002612623.1| (hypothetical protein BRAFLDRAFT_114488 [Branchiostoma floridae] >gi|229298001|gb|EEN68632.1| hypothetical protein BRAFLDRAFT_114488 [Branchiostoma floridae]) HSP 1 Score: 181.03 bits (458), Expect = 8.678e-48 Identity = 113/277 (40.79%), Postives = 169/277 (61.01%), Query Frame = 0
Query: 1 MAVRFLPGTHSFFSAGKDKLLKYWDADSFELILTHRGHAGEVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFEDGVGK-EGRGEEGEEGAESGRAGRQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLRLLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVE 276
M V+FLP TH FFSAGKD +K WDAD+F+ ILT GH EVW M + G+ + TG D+S+R+W+R+ + + +EEER+ E E+ FE + K E GE E+G AG++ +E+VK E++ EA+E+ + + EEH + +A ++ PLPPP N P RF+L ++ ++ +LE+ALLVLP + LL+ L L E EVEL RCL FL R H + ++ L+P++ +LR ++R+ RD V N+ GL+ L+RE+E
Sbjct: 631 MCVQFLPRTHMFFSAGKDGRVKQWDADNFQHILTLEGHQAEVWCMAISPNGDYVVTGSHDKSLRLWQRTQEPLILEEERESEREKDFEQTLAKGEHPAVPGETSGEAGMAGKKSVETVKAAEKVMEAVEIYKEETARLEEHRRECEALNKQ--VPLPPPHPMLLAYGNATPLRFVLEVIKKVRSSELEEALLVLPFSYVIDLLKLLNDFLTEGWEVELTCRCLFFLLRIHQGAITSNQVLLPVMDNLRKNTQDRVHQIRDVVGFNLGGLQFLQREME 905 The following BLAST results are available for this feature:
BLAST of EWM22942.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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