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Properties
Property Name | Value |
Product | Protein of unknown function DUF2358 |
Orig transcript id | gnl|cribi|Naga_100396g3.7451.mrna |
Orig protein id | gnl|cribi|Naga_100396g3.7451 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002473.1 | supercontig | CM002473.1:230863..232663 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7744 ID=rna7744|Name=rna7744|organism=Nannochloropsis gaditana|type=mRNA|length=3083bp TACGGCCTGTGAGGTGGCGGCTTGAAGGGATGGCGAGCCTCTCGGAAACG TTCTGGGTGGCCGGGCTTGTCAACCTGCTCGACGCTCGCACTTAAGTTTC CCGCGGCTGCACTTAGCAAGTCGTGAGTCGCTTCTCATGAGGGCATCCTT TGTGATAACATCGCGTCGGATGTGAATACGGTATTCCACGCGTTACAAAA AGAAAAAATCAAAAAATGCGTCGCGGGGTATTTAGTACGCTCTGTCTCCT TCACAGTATCAAACATGTCGTGGCCTCAACCCTGGGGGCCGTTGGTTGTC CATCCTGGAAACAATTGCACGTAGGCGCACCTCCACTGATATGTCAAACC CAGACCCTATGCCGACTACGCCTTTCCCGTTGAGCAGCGGGCGCACGTGG CATGCCGCTGCTGTGGCTGCGGCTGCTGCTGCCTCTGCCGCTGCTGCTGC TGACCCGCTTGTATCAGCCAGGGAAGGGAAGGCTGGCGAGGATTCGGGAA GTGGGTTGGTAGTCCATCACATTGTTCTGAGTGAATTCGACATCGTCACT GGCTCGACTGTCCGGTACCAGTATCCTCGACCTGTGCCAGGCGAGTCGCC GGACAGCCTGGCGGAGAAGATGCTGCCGGAGGGAGCACACAGCCACGCAG AGAATGAAACCTGGTTTTTTTTCAACCGAGGGTCTTTGACGTGGGACGAG CAGGAGGCGGCAGAGGAGGGGGGGCACACGACGGACGACAGGGCCGGAGA AGAAAACGACCGTGTGGACGGGGAAAGCATGAACATTATTTCGCCAGCTC CGCCGTTTCTTTACGGCTACAGCATTGTCAAGACCCAACGCGATCCCCAT GCACGTCGGGGGGCTTGGGTGAAGGCGCTGGCATTGGTCTCCCCGCTGCC CATTTTGGAGGCCCTCCGCCCGGCCATGGCCCTGGCTCTGGATGAATGCT TCTCTCGGGACTCTCACCCTGCAACAGTACCCGCGCCACCACCCGAAGCG CCCCCCCCCGCCCTCCCTCCCTCTTCTGGAGGCGAAGACGCCCTCCTCCA GGTCATTCGCCGCCTCTTTCACCGACTCAACGCCCTCGACCTCCGGCAAA TCCCGCGTCCCACCCTGCTCGAGCGCCAGCTCATGCGTCGGGGGGTCTGC ACACCCGTCGTCCCCGCAGCAGATCTCACTCGGCCCGACTCGGTCTACCA CCCCTCTCACCCGGCATGGAGGAGGCGGGTCTCCTTGCCTTGGGCGGACC TTCCTCAGGGGCTTCAGGCGGTGGGAGGGGGCCGGGAGGAGGAGAGAGGC CGGACGAGCCCTGCGCTGACCCACCCTCAGCCACGCCTTCCGCGGCCCCC CGAGCCCGTCACCCTCTCCCTCGCCTTCTCTCTTCCCCGCTATTCGGACG AGGCCGGTCGCCCCTCTCTTGCCTGGCTGCTCCGGCGCTTTCCCGACGAC CTGATGCGGATCTACCAGGCCCTCCTTCTGGGGAAACGCCTCCTCTTCCT GACCGTCTCGGAGCCAGCCGCCTCCGCCTGTCGCGCCGTCCTCTCCTCCC TCCTCCTGCTCTCCCCCCCCTTCCTCGGACTTCTCCGCCGGGCCTTCCCC TACGTCAGCCTGGCCGACCTGAGCTTCCTCCAGCTCCCTTCGCCTCCCAC CACTCCCTCTGTCAGCGACAAGGGGGCTCTCGGCCTGGCGCGGGGGTATG TGGCGGGCGCCACCAACCCCGTGTTCGCCAGGCGCGAGGAGTGGTGGGAC CTCCTGTGCGACCTGGACCGCGGCCGCTGCTTCCTGCCGGGGGAGGCAGG AGGAGGGGAGGGAGAGGGTGACGGAGGCACGTTGGGAGGGAGAGGGGCAG GACGGGAGGGGGGCAAAGGCGGAGTGTGCGAGTATTTGGAGGGAGAGCTG CTGTCAGGGGAGCTCGATGCCGCCTTTTCGGCGCACTTGCGAGCGACCAT GGCGGCAGCTTATAGCGCGCCGTTGCGGATGCCTTCAGGGAGGAGAGAGG TGGAGGGAGGAGGAGGAGCAAGAGAAGGGGCAGGGACGGAGGGAGGGGGG CTAGAGGAGTACCTCCGGGTCGCTCTAAACGCGCACACCCAGGCACTCGT GGCGCTGGCGGACGAGGGGGGGTCGCTAGCGCTCACCAAGCGGTCGCGAG AAGTGGTGGGGCGGATGGCGATGGCTCAGAGCCACCGGGTGCAGAGGATG CGGCAGTGGATGGCGGAGGCGGTCCGGGGAAAAGTCATGGTAAGGGGGCG GGAAGGGAAAGGGAGTGAAGTCGGCCGCCGGAGGATTCGGCACACGCCCG CCCCAGCCTCTCCCCTTCTCACGTGCTCAGCTTCCCCCCCTCGCCGCAAC AGCTCGTGATGGACCCCTGGGCCGGGCTGGCCTCCCTCCGCCTCCCTCTT GCCGCCATGCGGTCCCACTGCCACCTTTTGGAGCTGGCCGCGTCCCTCTC CGAGGCCGAGGTCGAGGGCATCCTCAGCGACCTGAATCAAGCCCTGCAGG ACCCCTCGGCCGCCCTCGCCTTCCTCGCCGCCACTCCCGAGCATAGCCAC TACGATAAGCGGGTGTTGGGAGGGGCGGGAGCCTTCTCCGTGGTGGGCGC TGCCTTATTCCACCCCTCTCAGAACTGCAGGTTTTATGCCTGTCTCATAT TGCATAGATTGGAGCTGTGCCCAGCCTCAAGGCCGGCTGTGGAGTCTCTG AACGGGATGGTGCGTCTGGCCTACCGGCGAGTTTGGCGGGAGATGACATC TGGGTGAAAGAGGGGTGTGGGAAGAGGGCGGAGCGTGGAGGAGGGTGTGG TAGAACCCTGTTTGCGTAGGCCTGCAGGCATTAGAAGCCAGCGGCAGTCG GGGTGATCGATCCCGGGCCAGCCTCGTAGGGGTACGGGGGGGGCTTAATG CTTGGAATGGGTTTTGGAAAACAATGGAGCGCACTCGTCCTAATGCAATC CTCTCATATGTGCGAAGTACAGAAAGTAAAGTTAATTACAGGCTAACATC GCGTTGTCGCCTTCAATTTTTATTTTAGATGTGTGACATGAAACGATGAT GGGAAAATGGAGCTATTCCCCAACAAAATATGC back to topprotein sequence of rna7744 >rna7744-protein ID=rna7744-protein|Name=rna7744|organism=Nannochloropsis gaditana|type=polypeptide|length=520bp MAVHRSRRRKGRIDEAQQEWSGREDAGEKGSEGMRHECSTSQMVSGTGKG MLALVMLLTARQTEGFHFMSPSKTAGSSAAHAGRDGGVAGVGRVPALGSE KFGRREGRPSTLSRGGRASRSGVVGTGGKWLRSSSESVVGPAVEHLVPAP SQWALPDLSFSSSSASSRSLFPSMGQSSTPATFPFILYQRAAPRALSSAL AGEITQPSLAETGLLAWAGGCSDGQGESGFFHLDSELGPLCGRKGGESWV EEGEDEEEPSEECRRLSRTRRRAEEAVDPPSASVTLGDGGRKALMREEER VEPGGTWAARGEVRQAFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKA LDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRV ARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRV NARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGMR RDRAWSGIAGLTVKVEIERS back to topmRNA from alignment at CM002473.1:230863..232663+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7744 ID=rna7744|Name=rna7744|organism=Nannochloropsis gaditana|type=mRNA|length=1801bp|location=Sequence derived from alignment at CM002473.1:230863..232663+ (Nannochloropsis gaditana) ATGGCCGTTCACAGGTCACGACGTAGGAAAGGAAGAATAGATGAAGCCCA
GCAGGAGTGGAGTGGCCGAGAGGAtgcgggggagaaaggcagtGAAGGCA
TGAGACATGAGTGCTCCACGTCACAAATGGTGTCAGGAACAGGGAAGGGC
ATGCTGGCCCTGGTGATGCTCTTGACGGCCAGACAAACGGAGGGATTTCA
TTTCATGAGCCCATCGAAAACTGCGGGAAGCAGCGCGGCTCatgcaggga
gggatggcggggTAGCAGGGGTGGGACGGGTACCAGCACTCGGCAGCGAG
AAATTCGGTCGGCGCGAGGGACGCCCGTCGACTTTAtcgagggggggcag
agcgAGCAGGTCCGGAGTGGTGGGCACAGGCGGCAAGTGGCTGCGGTCTT
CCTCCGAGAGTGTCGTGGGGCCGGCGGTGGAGCACCTGGTCCCTGCACCC
TCCCAGTGGGCGCTCCCcgacctctccttctcctcctcctccgcctcttc
gcgctctcttttcccctccatggGCCAATCGTCCACTCCTGCCactttcc
ccttcattctCTATCAGAGGGCAGCCCCCAGGGCCCtatcctccgccttg
gcagGGGAGATCACTCAACCCTCGCTGGCAGAAACGGGGCTGTTGGCCTG
GGCCGGTGGCTGCAGCGACGGTCAAGGGGAAAGCGGCTTCTTCCATTTGG
ACTCGGAGCTGGGGCCTTTGtgtggaagaaaagggggggagtcatgggtc
gaggagggggaggacgaggaagaaccGAGCGAGGAGTGCCGGCGGTTGTC
ACGGACCAGGAgaagagcggaggaggccgtTGATCCTCCCTCGGCGTCAG
TCACCCTGGGAGACGGTGGACGGAAGGCGCTcatgcgggaagaggaaagg
gtggagcCGGGCGGGACGTGGGCCGCCCGCGGGGAGGTCCGTcaggcctt
cccctccatgaccgagcagcctcccccctccccgcaggTGCAAGGGGACG
GTCCGGAGCCCAACCGGAACGATAACTTCACGATCAATCTTGGCAAGGCC
CTGGATCATCTGCGTGTGGATGTGCCTCTTCTGTTCGAGAGGGAGCCCGA
CCTGAGCATCTACACGGAGGACGTGCGGCTGCGCGATCACGCCCGCATTT
ACGCCTCGGGCAAGTTCATGTACCAGATGGTCTACTTCTCCCTGCGCGTG
GCGAGGATCTTCATGCCCATGCCTCCGCTGGTGGAGGTCCTGAACATTCG
CTGGTGTCCCGCCAGGCAGAGCATCGAGGTGCGATTCCAGATTCGCGTAG
ACACGCTCTCAGACAGCCTCTACTTCGACGCCGTCTCCGTCTACCGGGTC
AACGCGCGGGGCCTGATCTACGAGCACCTGATCGAGAAAGGTGCGTGCcg
gggaaaagatgagggGGGGATCGTGGCGCTTGCCGAATACCTTGTCCTGA
TTGCTTGCCTCGTGGCCAAGAGGACCTCCTCTAGCTCTTCCTCaccatct
cctttcctggCGCCTTCCCACAGTGATACGGAACGACCTCTCGGAGAAAC
CCTCGATCGTCAACCTCTTCTACGCGACACGACAGGTCCTGGTGGGCGGC
AAAGTGCCCATCCCGGACAGCGTGGGCATGtaaggcggggaagagggctg
GGAATGACGCGCGGGGGAGACAGGAATTGCGACGAGAAACATGGGGGCAG
TGTATAGAGCCGTATCAATCGACACGGCGGACAGGAGGCGGGACAGAGCG
TGGTCAGGGATAGCAGGGTTGACAGTGAAAGTGGAGATAGAGCGCAGCTA
G back to topCoding sequence (CDS) from alignment at CM002473.1:230863..232663+ >rna7744 ID=rna7744|Name=rna7744|organism=Nannochloropsis gaditana|type=CDS|length=4689bp|location=Sequence derived from alignment at CM002473.1:230863..232663+ (Nannochloropsis gaditana) ATGGCCGTTCACAGGTCACGACGTAGGAAAGGAAGAATAGATGAAGCCCA GCAGGAGTGGAGTGGCCGAGAGGAtgcgggggagaaaggcagtGAAGGCA TGAGACATGAGTGCTCCACGTCACAAATGGTGTCAGGAACAGGGAAGGGC ATGCTGGCCCTGGTGATGCTCTTGACGGCCAGACAAACGGAGGGATTTCA TTTCATGAGCCCATCGAAAACTGCGGGAAGCAGCGCGGCTCatgcaggga gggatggcggggTAGCAGGGGTGGGACGGGTACCAGCACTCGGCAGCGAG AAATTCGGTCGGCGCGAGGGACGCCCGTCGACTTTAtcgagggggggcag agcgAGCAGGTCCGGAGTGGTGGGCACAGGCGGCAAGTGGCTGCGGTCTT CCTCCGAGAGTGTCGTGGGGCCGGCGGTGGAGCACCTGGTCCCTGCACCC TCCCAGTGGGCGCTCCCcgacctctccttctcctcctcctccgcctcttc gcgctctcttttcccctccatggGCCAATCGTCCACTCCTGCCactttcc ccttcattctCTATCAGAGGGCAGCCCCCAGGGCCCtatcctccgccttg gcagGGGAGATCACTCAACCCTCGCTGGCAGAAACGGGGCTGTTGGCCTG GGCCGGTGGCTGCAGCGACGGTCAAGGGGAAAGCGGCTTCTTCCATTTGG ACTCGGAGCTGGGGCCTTTGtgtggaagaaaagggggggagtcatgggtc gaggagggggaggacgaggaagaaccGAGCGAGGAGTGCCGGCGGTTGTC ACGGACCAGGAgaagagcggaggaggccgtTGATCCTCCCTCGGCGTCAG TCACCCTGGGAGACGGTGGACGGAAGGCGCTcatgcgggaagaggaaagg gtggagcCGGGCGGGACGTGGGCCGCCCGCGGGGAGGTCCGTcaggcctt cccctccatgaccgagcagcctcccccctccccgcaggTGCAAGGGGACG GTCCGGAGCCCAACCGGAACGATAACTTCACGATCAATCTTGGCAAGGCC CTGGATCATCTGCGTGTGGATGTGCCTCTTCTGTTCGAGAGGGAGCCCGA CCTGAGCATCTACACGGAGGACGTGCGGCTGCGCGATCACGCCCGCATTT ACGCCTCGGGCAAGTTCATGTACCAGATGGTCTACTTCTCCCTGCGCGTG GCGAGGATCTTCATGCCCATGCCTCCGCTGGTGGAGGTCCTGAACATTCG CTGGTGTCCCGCCAGGCAGAGCATCGAGGTGCGATTCCAGATTCGCGTAG ACACGCTCTCAGACAGCCTCTACTTCGACGCCGTCTCCGTCTACCGGGTC AACGCGCGGGGCCTGATCTACGAGCACCTGATCGAGAAAGTGATACGGAA CGACCTCTCGGAGAAACCCTCGATCGTCAACCTCTTCTACGCGACACGAC AGGTCCTGGTGGGCGGCAAAGTGCCCATCCCGGACAGCGTGGGCATGAGG CGGGACAGAGCGTGGTCAGGGATAGCAGGGTTGACAGTGAAAGTGGAGAT AGAGCGCAGCTAGATGGCCGTTCACAGGTCACGACGTAGGAAAGGAAGAA TAGATGAAGCCCAGCAGGAGTGGAGTGGCCGAGAGGAtgcgggggagaaa ggcagtGAAGGCATGAGACATGAGTGCTCCACGTCACAAATGGTGTCAGG AACAGGGAAGGGCATGCTGGCCCTGGTGATGCTCTTGACGGCCAGACAAA CGGAGGGATTTCATTTCATGAGCCCATCGAAAACTGCGGGAAGCAGCGCG GCTCatgcagggagggatggcggggTAGCAGGGGTGGGACGGGTACCAGC ACTCGGCAGCGAGAAATTCGGTCGGCGCGAGGGACGCCCGTCGACTTTAt cgagggggggcagagcgAGCAGGTCCGGAGTGGTGGGCACAGGCGGCAAG TGGCTGCGGTCTTCCTCCGAGAGTGTCGTGGGGCCGGCGGTGGAGCACCT GGTCCCTGCACCCTCCCAGTGGGCGCTCCCcgacctctccttctcctcct cctccgcctcttcgcgctctcttttcccctccatggGCCAATCGTCCACT CCTGCCactttccccttcattctCTATCAGAGGGCAGCCCCCAGGGCCCt atcctccgccttggcagGGGAGATCACTCAACCCTCGCTGGCAGAAACGG GGCTGTTGGCCTGGGCCGGTGGCTGCAGCGACGGTCAAGGGGAAAGCGGC TTCTTCCATTTGGACTCGGAGCTGGGGCCTTTGtgtggaagaaaaggggg ggagtcatgggtcgaggagggggaggacgaggaagaaccGAGCGAGGAGT GCCGGCGGTTGTCACGGACCAGGAgaagagcggaggaggccgtTGATCCT CCCTCGGCGTCAGTCACCCTGGGAGACGGTGGACGGAAGGCGCTcatgcg ggaagaggaaagggtggagcCGGGCGGGACGTGGGCCGCCCGCGGGGAGG TCCGTcaggccttcccctccatgaccgagcagcctcccccctccccgcag gTGCAAGGGGACGGTCCGGAGCCCAACCGGAACGATAACTTCACGATCAA TCTTGGCAAGGCCCTGGATCATCTGCGTGTGGATGTGCCTCTTCTGTTCG AGAGGGAGCCCGACCTGAGCATCTACACGGAGGACGTGCGGCTGCGCGAT CACGCCCGCATTTACGCCTCGGGCAAGTTCATGTACCAGATGGTCTACTT CTCCCTGCGCGTGGCGAGGATCTTCATGCCCATGCCTCCGCTGGTGGAGG TCCTGAACATTCGCTGGTGTCCCGCCAGGCAGAGCATCGAGGTGCGATTC CAGATTCGCGTAGACACGCTCTCAGACAGCCTCTACTTCGACGCCGTCTC CGTCTACCGGGTCAACGCGCGGGGCCTGATCTACGAGCACCTGATCGAGA AAGTGATACGGAACGACCTCTCGGAGAAACCCTCGATCGTCAACCTCTTC TACGCGACACGACAGGTCCTGGTGGGCGGCAAAGTGCCCATCCCGGACAG CGTGGGCATGAGGCGGGACAGAGCGTGGTCAGGGATAGCAGGGTTGACAG TGAAAGTGGAGATAGAGCGCAGCTAGATGGCCGTTCACAGGTCACGACGT AGGAAAGGAAGAATAGATGAAGCCCAGCAGGAGTGGAGTGGCCGAGAGGA tgcgggggagaaaggcagtGAAGGCATGAGACATGAGTGCTCCACGTCAC AAATGGTGTCAGGAACAGGGAAGGGCATGCTGGCCCTGGTGATGCTCTTG ACGGCCAGACAAACGGAGGGATTTCATTTCATGAGCCCATCGAAAACTGC GGGAAGCAGCGCGGCTCatgcagggagggatggcggggTAGCAGGGGTGG GACGGGTACCAGCACTCGGCAGCGAGAAATTCGGTCGGCGCGAGGGACGC CCGTCGACTTTAtcgagggggggcagagcgAGCAGGTCCGGAGTGGTGGG CACAGGCGGCAAGTGGCTGCGGTCTTCCTCCGAGAGTGTCGTGGGGCCGG CGGTGGAGCACCTGGTCCCTGCACCCTCCCAGTGGGCGCTCCCcgacctc tccttctcctcctcctccgcctcttcgcgctctcttttcccctccatggG CCAATCGTCCACTCCTGCCactttccccttcattctCTATCAGAGGGCAG CCCCCAGGGCCCtatcctccgccttggcagGGGAGATCACTCAACCCTCG CTGGCAGAAACGGGGCTGTTGGCCTGGGCCGGTGGCTGCAGCGACGGTCA AGGGGAAAGCGGCTTCTTCCATTTGGACTCGGAGCTGGGGCCTTTGtgtg gaagaaaagggggggagtcatgggtcgaggagggggaggacgaggaagaa ccGAGCGAGGAGTGCCGGCGGTTGTCACGGACCAGGAgaagagcggagga ggccgtTGATCCTCCCTCGGCGTCAGTCACCCTGGGAGACGGTGGACGGA AGGCGCTcatgcgggaagaggaaagggtggagcCGGGCGGGACGTGGGCC GCCCGCGGGGAGGTCCGTcaggccttcccctccatgaccgagcagcctcc cccctccccgcaggTGCAAGGGGACGGTCCGGAGCCCAACCGGAACGATA ACTTCACGATCAATCTTGGCAAGGCCCTGGATCATCTGCGTGTGGATGTG CCTCTTCTGTTCGAGAGGGAGCCCGACCTGAGCATCTACACGGAGGACGT GCGGCTGCGCGATCACGCCCGCATTTACGCCTCGGGCAAGTTCATGTACC AGATGGTCTACTTCTCCCTGCGCGTGGCGAGGATCTTCATGCCCATGCCT CCGCTGGTGGAGGTCCTGAACATTCGCTGGTGTCCCGCCAGGCAGAGCAT CGAGGTGCGATTCCAGATTCGCGTAGACACGCTCTCAGACAGCCTCTACT TCGACGCCGTCTCCGTCTACCGGGTCAACGCGCGGGGCCTGATCTACGAG CACCTGATCGAGAAAGTGATACGGAACGACCTCTCGGAGAAACCCTCGAT CGTCAACCTCTTCTACGCGACACGACAGGTCCTGGTGGGCGGCAAAGTGC CCATCCCGGACAGCGTGGGCATGAGGCGGGACAGAGCGTGGTCAGGGATA GCAGGGTTGACAGTGAAAGTGGAGATAGAGCGCAGCTAG back to top
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