EWM22953.1, cds7723 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|585103685|gb|EWM22953.1| (Protein of unknown function DUF2358 [Nannochloropsis gaditana]) HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0 Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0 Query: 1 MAVHRSRRRKGRIDEAQQEWSGREDAGEKGSEGMRHECSTSQMVSGTGKGMLALVMLLTARQTEGFHFMSPSKTAGSSAAHAGRDGGVAGVGRVPALGSEKFGRREGRPSTLSRGGRASRSGVVGTGGKWLRSSSESVVGPAVEHLVPAPSQWALPDLSFSSSSASSRSLFPSMGQSSTPATFPFILYQRAAPRALSSALAGEITQPSLAETGLLAWAGGCSDGQGESGFFHLDSELGPLCGRKGGESWVEEGEDEEEPSEECRRLSRTRRRAEEAVDPPSASVTLGDGGRKALMREEERVEPGGTWAARGEVRQAFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGMRRDRAWSGIAGLTVKVEIERS 520 MAVHRSRRRKGRIDEAQQEWSGREDAGEKGSEGMRHECSTSQMVSGTGKGMLALVMLLTARQTEGFHFMSPSKTAGSSAAHAGRDGGVAGVGRVPALGSEKFGRREGRPSTLSRGGRASRSGVVGTGGKWLRSSSESVVGPAVEHLVPAPSQWALPDLSFSSSSASSRSLFPSMGQSSTPATFPFILYQRAAPRALSSALAGEITQPSLAETGLLAWAGGCSDGQGESGFFHLDSELGPLCGRKGGESWVEEGEDEEEPSEECRRLSRTRRRAEEAVDPPSASVTLGDGGRKALMREEERVEPGGTWAARGEVRQAFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGMRRDRAWSGIAGLTVKVEIERS Sbjct: 1 MAVHRSRRRKGRIDEAQQEWSGREDAGEKGSEGMRHECSTSQMVSGTGKGMLALVMLLTARQTEGFHFMSPSKTAGSSAAHAGRDGGVAGVGRVPALGSEKFGRREGRPSTLSRGGRASRSGVVGTGGKWLRSSSESVVGPAVEHLVPAPSQWALPDLSFSSSSASSRSLFPSMGQSSTPATFPFILYQRAAPRALSSALAGEITQPSLAETGLLAWAGGCSDGQGESGFFHLDSELGPLCGRKGGESWVEEGEDEEEPSEECRRLSRTRRRAEEAVDPPSASVTLGDGGRKALMREEERVEPGGTWAARGEVRQAFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGMRRDRAWSGIAGLTVKVEIERS 520
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|299471184|emb|CBN79040.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.4185 bits (202), Expect = 2.884e-13 Identity = 52/166 (31.33%), Postives = 79/166 (47.59%), Query Frame = 0 Query: 317 FPSMTEQPPPSPQVQGDGPEP----NRND----NFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVAR-IFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKP 473 FPS+T QP P + DG E R+D +F +NLGK + LR D P +F P I+TE++ LRD + G Y+ V+ +LR R FM L W + + +++ +Y D +S Y +N+ GL Y H +E V+ N + +P Sbjct: 40 FPSITRQPRPG-IIARDGTEDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEP 204
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|159486970|ref|XP_001701509.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158271570|gb|EDO97386.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 76.2554 bits (186), Expect = 8.811e-13 Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 0 Query: 333 DGPEPNRNDN------FTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRND 468 D P+ RN + + N+G A+ LR D+P+LF+RE + SIY ED+ RD R G YQ++++SLR V+V I W P I++R+ + RV ++ FD +S YR+++ G IYEH ++ V+ D Sbjct: 15 DRPQRTRNQDREKDPDYFANVGDAIRSLREDIPMLFQRELNYSIYREDIVFRD-PRNTVKGMKNYQLIFWSLRFHGKLFFNKLYVDVKRI-WQPEDSVIKMRWTVHGIPRVPWEAEGT-FDGISTYRLDSHGRIYEHCVDNVLLRD 157
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|1199290271|gb|OUS45371.1| (hypothetical protein BE221DRAFT_116063 [Ostreococcus tauri]) HSP 1 Score: 78.1814 bits (191), Expect = 5.925e-12 Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 0 Query: 329 QVQGDGPEPN--RNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHAR------------IYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCP----ARQSIEVRFQIR-----VDTL-SDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYA 481 Q QGD EP+ ++D+F G+A+ LR D P + +REP SIY +++ L D I AS K Y+ V+ +R+ + +EV I W P ++I VR+ +R V +L +D FD +S Y+++++G IYEH I + + + + +VN+ A Sbjct: 203 QGQGDDDEPSSSKDDDFYAQSGEAIRILREDYPDMLKREPRWSIYRDNIGLVDETMTFAGPGRDGRGGIMASNKNEYKRVFKIVRIVAAVLFSNSTIEVSRI-WSPLGSSGLRTIRVRWAVRGKLRLVSSLGADEARFDGISEYKLDSKGFIYEHKITDLDWDVAALRERVVNMMRA 378
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|308813129|ref|XP_003083871.1| (OJ1076_H08.5 gene product (ISS) [Ostreococcus tauri] >gi|116055753|emb|CAL57838.1| Protein of unknown function DUF2358 [Ostreococcus tauri]) HSP 1 Score: 78.1814 bits (191), Expect = 6.312e-12 Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 0 Query: 329 QVQGDGPEPN--RNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHAR------------IYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCP----ARQSIEVRFQIR-----VDTL-SDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYA 481 Q QGD EP+ ++D+F G+A+ LR D P + +REP SIY +++ L D I AS K Y+ V+ +R+ + +EV I W P ++I VR+ +R V +L +D FD +S Y+++++G IYEH I + + + + +VN+ A Sbjct: 203 QGQGDDDEPSSSKDDDFYAQSGEAIRILREDYPDMLKREPRWSIYRDNIGLVDETMTFAGPGRDGRGGIMASNKNEYKRVFKIVRIVAAVLFSNSTIEVSRI-WSPLGSSGLRTIRVRWAVRGKLRLVSSLGADEARFDGISEYKLDSKGFIYEHKITDLDWDVAALRERVVNMMRA 378
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|971514066|dbj|GAQ84121.1| (hypothetical protein KFL_001770060 [Klebsormidium nitens]) HSP 1 Score: 76.6406 bits (187), Expect = 1.625e-11 Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 0 Query: 336 EPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIR---VDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPS 474 E N D F +N+G A+ LR ++P LF R+P +IY ED+ RD + G Y++++++LR V++ I W P + I VR+ +R +FD S Y+++ G IYEH ++ VI +S+ PS Sbjct: 160 ESNERDQFYVNVGDAIRTLREELPGLFYRKPTYNIYREDIVFRDRVNTF-HGLDNYKLIFWALRFHGKIFFKAIWVDIQRI-WQPNDKVIMVRWTVRGVPRVPWEAQGHFDGTSEYKLDKDGKIYEHKVDNVI---MSQPPS 296
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|302850158|ref|XP_002956607.1| (hypothetical protein VOLCADRAFT_77161 [Volvox carteri f. nagariensis] >gi|300258134|gb|EFJ42374.1| hypothetical protein VOLCADRAFT_77161 [Volvox carteri f. nagariensis]) HSP 1 Score: 75.8702 bits (185), Expect = 3.296e-11 Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = 0 Query: 339 RNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRV-ARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRND 468 R++++ N+G A+ LR D+P+LF+RE + IY +DV RD + K YQ++++SLR +IF V+V I W P I++R+ + RV ++ FD +S YR+++ G IYEH ++ ++ D Sbjct: 110 RSEDYFANVGDAIRCLREDIPMLFQRELNFDIYRDDVVFRDPRNCFKGMK-NYQLIFWSLRFHGKIFFKT-LYVDVRRI-WQPEDGIIKMRWTVHGIPRVPWEAEGT-FDGISTYRLDSHGKIYEHSVDNILLRD 240
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|145355490|ref|XP_001421994.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582233|gb|ABP00288.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 73.9442 bits (180), Expect = 1.062e-10 Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 0 Query: 316 AFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIY------------ASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCP----ARQSIEVRFQIR-----VDTL-SDSLYFDAVSVYRVNARGLIYEHLIEKV 464 A TE PS DGP +++D+F G+A+ LR D P L +EP +IY +D+ L D + A+ Y+ V+ +R+ + +EV I W P ++I VR+ +R V ++ +D FD +S Y+++++G IYEH I + Sbjct: 141 AIVDSTESKGPSGGRDEDGPSSSKDDDFYAQSGEAIRVLREDYPYLLTKEPRWTIYRDDIGLLDETMTFAGPGREGRNGVMATNMSEYKRVFKIIRIIAAVLFSQSTMEVSRI-WSPLGSSGLRTIRVRWSVRGKVRLVGSIGADEARFDGISEYKLDSKGFIYEHKITDL 310
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|302814143|ref|XP_002988756.1| (hypothetical protein SELMODRAFT_47740, partial [Selaginella moellendorffii] >gi|300143577|gb|EFJ10267.1| hypothetical protein SELMODRAFT_47740, partial [Selaginella moellendorffii]) HSP 1 Score: 67.3958 bits (163), Expect = 7.877e-10 Identity = 42/130 (32.31%), Postives = 72/130 (55.38%), Query Frame = 0 Query: 342 NFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRN 467 ++ +N+G A+ LR ++P+LF R+ IY ED+ RD + G Y+ + LR+ + VE+L++ W P+ +I +R+ + RV + L FD VS Y+++++G IYEH + VI N Sbjct: 1 DYHVNVGYAIRTLREELPVLFHRDLSYQIYREDISFRDPVNCF-HGLGNYKFIVQVLRLNGRMLFKSIWVEILSV-WQPSESTIVIRWSVRGIPRVPWEARGL-FDGVSEYKLDSKGKIYEHKVHNVIFN 127
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|548845083|gb|ERN04574.1| (hypothetical protein AMTR_s00075p00066800 [Amborella trichopoda]) HSP 1 Score: 70.0922 bits (170), Expect = 1.502e-9 Identity = 64/223 (28.70%), Postives = 104/223 (46.64%), Query Frame = 0 Query: 263 CRRLSRTRR--RAEEAVDPPSASVTLGDGGRKA----LMREEERVEPGGTWAARGEVRQAF-------PSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRV-ARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRN 467 C + S RR R ++ + + V+LG R+ + E ERV+ G + + F S+ +PP S Q +G N ++ +NLG A+ LR D+P +F REP +IY +D+ +D + G Y++++ +LR RIF L L+ W P +I +R+ + RV S FD S Y+++ G IYEH ++ N Sbjct: 17 CPKTSSCRRSKRESKSRNGVNIRVSLGPDCRRLGSSWELMERERVDAVQRELGMGILGEVFVSQLNLLSSVQYEPPSSKQKEGGD---NSKQDYYVNLGYAIRTLREDLPEIFYREPSFNIYRDDIVFKDRLNTFG-GIDNYKLIFRALRFYGRIF--FKALWIDLHTVWQPVESTIMIRWTVHGIPRVPWESQGR-FDGTSEYKLDKDGKIYEHRVDNFALN 232 The following BLAST results are available for this feature:
BLAST of EWM22953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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