EWM22953.1, cds7723 (CDS) Nannochloropsis gaditana

Overview
NameEWM22953.1
Unique Namecds7723
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:230863..232252 +
Alignment locationCM002473.1:232386..232491 +
Alignment locationCM002473.1:232597..232663 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22953.1
ProductProtein of unknown function DUF2358
Orig transcript idgnl|cribi|Naga_100396g3.7451.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:230863..232252 +
CM002473.1supercontigCM002473.1:232386..232491 +
CM002473.1supercontigCM002473.1:232597..232663 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358
Homology
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|585103685|gb|EWM22953.1| (Protein of unknown function DUF2358 [Nannochloropsis gaditana])

HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0
Query:    1 MAVHRSRRRKGRIDEAQQEWSGREDAGEKGSEGMRHECSTSQMVSGTGKGMLALVMLLTARQTEGFHFMSPSKTAGSSAAHAGRDGGVAGVGRVPALGSEKFGRREGRPSTLSRGGRASRSGVVGTGGKWLRSSSESVVGPAVEHLVPAPSQWALPDLSFSSSSASSRSLFPSMGQSSTPATFPFILYQRAAPRALSSALAGEITQPSLAETGLLAWAGGCSDGQGESGFFHLDSELGPLCGRKGGESWVEEGEDEEEPSEECRRLSRTRRRAEEAVDPPSASVTLGDGGRKALMREEERVEPGGTWAARGEVRQAFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGMRRDRAWSGIAGLTVKVEIERS 520
            MAVHRSRRRKGRIDEAQQEWSGREDAGEKGSEGMRHECSTSQMVSGTGKGMLALVMLLTARQTEGFHFMSPSKTAGSSAAHAGRDGGVAGVGRVPALGSEKFGRREGRPSTLSRGGRASRSGVVGTGGKWLRSSSESVVGPAVEHLVPAPSQWALPDLSFSSSSASSRSLFPSMGQSSTPATFPFILYQRAAPRALSSALAGEITQPSLAETGLLAWAGGCSDGQGESGFFHLDSELGPLCGRKGGESWVEEGEDEEEPSEECRRLSRTRRRAEEAVDPPSASVTLGDGGRKALMREEERVEPGGTWAARGEVRQAFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGMRRDRAWSGIAGLTVKVEIERS
Sbjct:    1 MAVHRSRRRKGRIDEAQQEWSGREDAGEKGSEGMRHECSTSQMVSGTGKGMLALVMLLTARQTEGFHFMSPSKTAGSSAAHAGRDGGVAGVGRVPALGSEKFGRREGRPSTLSRGGRASRSGVVGTGGKWLRSSSESVVGPAVEHLVPAPSQWALPDLSFSSSSASSRSLFPSMGQSSTPATFPFILYQRAAPRALSSALAGEITQPSLAETGLLAWAGGCSDGQGESGFFHLDSELGPLCGRKGGESWVEEGEDEEEPSEECRRLSRTRRRAEEAVDPPSASVTLGDGGRKALMREEERVEPGGTWAARGEVRQAFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGMRRDRAWSGIAGLTVKVEIERS 520          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|299471184|emb|CBN79040.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 82.4185 bits (202), Expect = 2.884e-13
Identity = 52/166 (31.33%), Postives = 79/166 (47.59%), Query Frame = 0
Query:  317 FPSMTEQPPPSPQVQGDGPEP----NRND----NFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVAR-IFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKP 473
            FPS+T QP P   +  DG E      R+D    +F +NLGK +  LR D P +F   P   I+TE++ LRD   +   G   Y+ V+ +LR  R  FM        L   W   +  +     +++      +Y D +S Y +N+ GL Y H +E V+ N  + +P
Sbjct:   40 FPSITRQPRPG-IIARDGTEDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEP 204          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|159486970|ref|XP_001701509.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158271570|gb|EDO97386.1| predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 76.2554 bits (186), Expect = 8.811e-13
Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 0
Query:  333 DGPEPNRNDN------FTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRND 468
            D P+  RN +      +  N+G A+  LR D+P+LF+RE + SIY ED+  RD  R    G   YQ++++SLR           V+V  I W P    I++R+ +    RV   ++   FD +S YR+++ G IYEH ++ V+  D
Sbjct:   15 DRPQRTRNQDREKDPDYFANVGDAIRSLREDIPMLFQRELNYSIYREDIVFRD-PRNTVKGMKNYQLIFWSLRFHGKLFFNKLYVDVKRI-WQPEDSVIKMRWTVHGIPRVPWEAEGT-FDGISTYRLDSHGRIYEHCVDNVLLRD 157          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|1199290271|gb|OUS45371.1| (hypothetical protein BE221DRAFT_116063 [Ostreococcus tauri])

HSP 1 Score: 78.1814 bits (191), Expect = 5.925e-12
Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 0
Query:  329 QVQGDGPEPN--RNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHAR------------IYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCP----ARQSIEVRFQIR-----VDTL-SDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYA 481
            Q QGD  EP+  ++D+F    G+A+  LR D P + +REP  SIY +++ L D               I AS K  Y+ V+  +R+    +     +EV  I W P      ++I VR+ +R     V +L +D   FD +S Y+++++G IYEH I  +  +  + +  +VN+  A
Sbjct:  203 QGQGDDDEPSSSKDDDFYAQSGEAIRILREDYPDMLKREPRWSIYRDNIGLVDETMTFAGPGRDGRGGIMASNKNEYKRVFKIVRIVAAVLFSNSTIEVSRI-WSPLGSSGLRTIRVRWAVRGKLRLVSSLGADEARFDGISEYKLDSKGFIYEHKITDLDWDVAALRERVVNMMRA 378          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|308813129|ref|XP_003083871.1| (OJ1076_H08.5 gene product (ISS) [Ostreococcus tauri] >gi|116055753|emb|CAL57838.1| Protein of unknown function DUF2358 [Ostreococcus tauri])

HSP 1 Score: 78.1814 bits (191), Expect = 6.312e-12
Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 0
Query:  329 QVQGDGPEPN--RNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHAR------------IYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCP----ARQSIEVRFQIR-----VDTL-SDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYA 481
            Q QGD  EP+  ++D+F    G+A+  LR D P + +REP  SIY +++ L D               I AS K  Y+ V+  +R+    +     +EV  I W P      ++I VR+ +R     V +L +D   FD +S Y+++++G IYEH I  +  +  + +  +VN+  A
Sbjct:  203 QGQGDDDEPSSSKDDDFYAQSGEAIRILREDYPDMLKREPRWSIYRDNIGLVDETMTFAGPGRDGRGGIMASNKNEYKRVFKIVRIVAAVLFSNSTIEVSRI-WSPLGSSGLRTIRVRWAVRGKLRLVSSLGADEARFDGISEYKLDSKGFIYEHKITDLDWDVAALRERVVNMMRA 378          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|971514066|dbj|GAQ84121.1| (hypothetical protein KFL_001770060 [Klebsormidium nitens])

HSP 1 Score: 76.6406 bits (187), Expect = 1.625e-11
Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 0
Query:  336 EPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIR---VDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPS 474
            E N  D F +N+G A+  LR ++P LF R+P  +IY ED+  RD    +  G   Y++++++LR           V++  I W P  + I VR+ +R           +FD  S Y+++  G IYEH ++ VI   +S+ PS
Sbjct:  160 ESNERDQFYVNVGDAIRTLREELPGLFYRKPTYNIYREDIVFRDRVNTF-HGLDNYKLIFWALRFHGKIFFKAIWVDIQRI-WQPNDKVIMVRWTVRGVPRVPWEAQGHFDGTSEYKLDKDGKIYEHKVDNVI---MSQPPS 296          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|302850158|ref|XP_002956607.1| (hypothetical protein VOLCADRAFT_77161 [Volvox carteri f. nagariensis] >gi|300258134|gb|EFJ42374.1| hypothetical protein VOLCADRAFT_77161 [Volvox carteri f. nagariensis])

HSP 1 Score: 75.8702 bits (185), Expect = 3.296e-11
Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = 0
Query:  339 RNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRV-ARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRND 468
            R++++  N+G A+  LR D+P+LF+RE +  IY +DV  RD    +   K  YQ++++SLR   +IF      V+V  I W P    I++R+ +    RV   ++   FD +S YR+++ G IYEH ++ ++  D
Sbjct:  110 RSEDYFANVGDAIRCLREDIPMLFQRELNFDIYRDDVVFRDPRNCFKGMK-NYQLIFWSLRFHGKIFFKT-LYVDVRRI-WQPEDGIIKMRWTVHGIPRVPWEAEGT-FDGISTYRLDSHGKIYEHSVDNILLRD 240          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|145355490|ref|XP_001421994.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582233|gb|ABP00288.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 73.9442 bits (180), Expect = 1.062e-10
Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 0
Query:  316 AFPSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIY------------ASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCP----ARQSIEVRFQIR-----VDTL-SDSLYFDAVSVYRVNARGLIYEHLIEKV 464
            A    TE   PS     DGP  +++D+F    G+A+  LR D P L  +EP  +IY +D+ L D    +            A+    Y+ V+  +R+    +     +EV  I W P      ++I VR+ +R     V ++ +D   FD +S Y+++++G IYEH I  +
Sbjct:  141 AIVDSTESKGPSGGRDEDGPSSSKDDDFYAQSGEAIRVLREDYPYLLTKEPRWTIYRDDIGLLDETMTFAGPGREGRNGVMATNMSEYKRVFKIIRIIAAVLFSQSTMEVSRI-WSPLGSSGLRTIRVRWSVRGKVRLVGSIGADEARFDGISEYKLDSKGFIYEHKITDL 310          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|302814143|ref|XP_002988756.1| (hypothetical protein SELMODRAFT_47740, partial [Selaginella moellendorffii] >gi|300143577|gb|EFJ10267.1| hypothetical protein SELMODRAFT_47740, partial [Selaginella moellendorffii])

HSP 1 Score: 67.3958 bits (163), Expect = 7.877e-10
Identity = 42/130 (32.31%), Postives = 72/130 (55.38%), Query Frame = 0
Query:  342 NFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRN 467
            ++ +N+G A+  LR ++P+LF R+    IY ED+  RD    +  G   Y+ +   LR+    +     VE+L++ W P+  +I +R+ +    RV   +  L FD VS Y+++++G IYEH +  VI N
Sbjct:    1 DYHVNVGYAIRTLREELPVLFHRDLSYQIYREDISFRDPVNCF-HGLGNYKFIVQVLRLNGRMLFKSIWVEILSV-WQPSESTIVIRWSVRGIPRVPWEARGL-FDGVSEYKLDSKGKIYEHKVHNVIFN 127          
BLAST of EWM22953.1 vs. NCBI_GenBank
Match: gi|548845083|gb|ERN04574.1| (hypothetical protein AMTR_s00075p00066800 [Amborella trichopoda])

HSP 1 Score: 70.0922 bits (170), Expect = 1.502e-9
Identity = 64/223 (28.70%), Postives = 104/223 (46.64%), Query Frame = 0
Query:  263 CRRLSRTRR--RAEEAVDPPSASVTLGDGGRKA----LMREEERVEPGGTWAARGEVRQAF-------PSMTEQPPPSPQVQGDGPEPNRNDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRV-ARIFMPMPPLVEVLNIRWCPARQSIEVRFQI----RVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRN 467
            C + S  RR  R  ++ +  +  V+LG   R+      + E ERV+        G + + F        S+  +PP S Q +G     N   ++ +NLG A+  LR D+P +F REP  +IY +D+  +D    +  G   Y++++ +LR   RIF     L   L+  W P   +I +R+ +    RV   S    FD  S Y+++  G IYEH ++    N
Sbjct:   17 CPKTSSCRRSKRESKSRNGVNIRVSLGPDCRRLGSSWELMERERVDAVQRELGMGILGEVFVSQLNLLSSVQYEPPSSKQKEGGD---NSKQDYYVNLGYAIRTLREDLPEIFYREPSFNIYRDDIVFKDRLNTFG-GIDNYKLIFRALRFYGRIF--FKALWIDLHTVWQPVESTIMIRWTVHGIPRVPWESQGR-FDGTSEYKLDKDGKIYEHRVDNFALN 232          
The following BLAST results are available for this feature:
BLAST of EWM22953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103685|gb|EWM22953.1|0.000e+0100.00Protein of unknown function DUF2358 [Nannochlorops... [more]
gi|299471184|emb|CBN79040.1|2.884e-1331.33conserved unknown protein [Ectocarpus siliculosus][more]
gi|159486970|ref|XP_001701509.1|8.811e-1334.25predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
gi|1199290271|gb|OUS45371.1|5.925e-1230.51hypothetical protein BE221DRAFT_116063 [Ostreococc... [more]
gi|308813129|ref|XP_003083871.1|6.312e-1230.51OJ1076_H08.5 gene product (ISS) [Ostreococcus taur... [more]
gi|971514066|dbj|GAQ84121.1|1.625e-1132.39hypothetical protein KFL_001770060 [Klebsormidium ... [more]
gi|302850158|ref|XP_002956607.1|3.296e-1134.07hypothetical protein VOLCADRAFT_77161 [Volvox cart... [more]
gi|145355490|ref|XP_001421994.1|1.062e-1028.65predicted protein [Ostreococcus lucimarinus CCE990... [more]
gi|302814143|ref|XP_002988756.1|7.877e-1032.31hypothetical protein SELMODRAFT_47740, partial [Se... [more]
gi|548845083|gb|ERN04574.1|1.502e-928.70hypothetical protein AMTR_s00075p00066800 [Amborel... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7744rna7744Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications