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Properties
| Property Name | Value |
|---|
| Product | Arf3-interacting protein 1, N-terminal domain protein |
| Orig transcript id | gnl|cribi|Naga_100396g2.7448.mrna |
| Orig protein id | gnl|cribi|Naga_100396g2.7448 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:227300..230449 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7743 ID=rna7743|Name=rna7743|organism=Nannochloropsis gaditana|type=mRNA|length=2025bp
TAAGGTGCGGCCTTCCATGTGCGACTCCACTTCTACTACCAAAGCTTCGT
CAGCGTCCTCCATTATAGTCTCAATGAACGATGAAGACGACTACCTTTCA
GACAACAGCAGCTGCGACAGTCGCATGGAAAAAGAAATGGATGCAGCCAA
CATGCTATCCTCCCTTAGAATGCTCACTCCGCGCAAGCTGAATGAAGAGT
CGCTCCGCCCTGCTCCCTCTGGGGCTGGTGATAGGCAGAGCAAATGGCCC
GCGGCGCACAGGCCTCCCGCATCTTCGACTGCGACCCTCTGCCCGGCGGC
GACGCTCAAGCGAGAAATGAGTATGGCAAGTACAACTAGTGCCAGTAGTC
TAAATAGCAGCAGCAGCAATAACAGTGACAGCAACAACGTGAAGGCTGGG
CTCTGCAGCACCATTGAGAGCATGGGCCCGGGGTCGGGGAGCGACATGGA
GACTAAATCAGCGGATCTTCAGTCCATTCACCCCACTGCCTTCAAACCTG
GCGGAAAATGGACAAGCAAAGAAGACGAGCAACTTCGAAAGGGAGTGACA
GCGGTTGGAGAGTGCAACTGGGACACAATATCGACGCAGTTTCTGCACTC
GCAACGCTCGGCCATCCAATGCTCGCATCGGTGGCAAAAAGTTTTGCGTC
CAGGCCTTGTCAAAGGGCCCTGGACACAAGAAGAGGACGATATCATAGTC
GTATGTCGGCAGAACGGGGTGACCGAGTGGAAAGAGATCGCCCTCCGCTT
AGAAGGGAGGCTAGGGAAGCAGTGCCGAGACCGGTGGTTGAACCACTTGG
ACCCGGCCATCAGCAAGCACTACTGGACGGAGGAAGAGGACAAGGTCCTT
GCCGAAGGCCGCAGGCTTTACGGGAACGCCTGGGCGAAAATAGCCAAGCT
TCTTCCAGGAAGGCCGGAGAATTCTATCAAAAATCGCTGGTATAGCGCAC
GCCGGGCTCAAGAGCGCTCCTTCGTTGCCCCGCCACGCTGGGACCTGAAA
TTTGAAAAGAAAGTTATCAGCGATTTTTGCGCTTCGTTTCGCAAGGAGGA
GGTTAACGTGGACGACATTCTCGCCCATATCATCGCCGTCCTCCGTGTCC
GGGACCCAGTGGCTTACTCTCCGTCCCTCGCGCACATCAACCGCCAGAAG
CTCCACCGACGCCTCACCGCGGGGCTGAAAAGAGAGGCGGCCAAGTATCA
ACCGGACTCCGACCTCCGGCAGGCCCTGAGGCGCGCCAAGTTGGTACAGC
AGAAAGGAGGCTCCTGGGAGGGGTTGGCGGCTCGCAGGTTGGCTGCGGCA
CCCAATGGGCCCGTGCTTGCCTCCGACACCTCGCAAGGCCCGGCCATCCC
CTCCTCGTCCTCCTCCACCTCACATCCCGCCCTGCCCCTTTCGGCGTCGC
CCTGCTCTTCCTCTTTCCACCCGCCTCCCCCCCCGGGCGCCGATACCCAT
ATGAGCCAGGTCATGATCCTCCTCCAGGATGCCTTGCGCGCGGAGACAGA
CTCCGGCCGAAGAGAGCTGCTGCAGCAAGCAGTCTCGGCGACCGTACAGT
CCAACCGAGCCGCCGTCAACTACGTGGAAGGGATCCTGGGCGGAGGCTTT
GCCAAGCTGGACTTGCAGGACGCGGGGGACAGGGCCAGCCTGGTAGAGGC
TCTGACCTCGGCGGTGCGGCGGGGCTTGTTTGTCTCGTAAGGGAATGATG
AAAGGGAAACTCTCTGGAGTGGAGCGCAGGAAAGGATTATTGCATACAGG
AAGGGGAAGGTCTTTTCTGGGTGTTCAGAACTCGATGTGGAGCCTTATCT
CTCTATATGAAATGGCAAATCGATTTATTGGTGCATATTTTGTTGGGGAA
TAGCTCCATTTTCCCATCATCGTTTCATGTCACACATCTAAAATAAAAAT
TGAAGGCGACAACGCGATGTTAGCCTGTAATTAACTTTACTTTCTGTACT
TCGCACATATGAGAGGATTGCATTAGGACGAGTGCGCTCCATTGTTTTCC
AAAACCCATTCCAAGCATTAAGCCC back to topprotein sequence of rna7743 >rna7743-protein ID=rna7743-protein|Name=rna7743|organism=Nannochloropsis gaditana|type=polypeptide|length=672bp
MSNPDPMPTTPFPLSSGRTWHAAAVAAAAAASAAAAADPLVSAREGKAGE
DSGSGLVVHHIVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAH
SHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNII
SPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALAL
DECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALD
LRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLP
WADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPR
YSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAV
LSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLA
RGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAGGGEGEGDGGTLGG
RGAGREGGKGGVCEYLEGELLSGELDAAFSAHLRATMAAAYSAPLRMPSG
RREVEGGGGAREGAGTEGGGLEEYLRVALNAHTQALVALADEGGSLALTK
RSREVVGRMAMAQSHRVQRMRQWMAEAVRGKVMVRGREGKGSEVGRRRIR
HTPAPASPLLTCSASPPRRNSS back to topmRNA from alignment at CM002473.1:227300..230449- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7743 ID=rna7743|Name=rna7743|organism=Nannochloropsis gaditana|type=mRNA|length=3150bp|location=Sequence derived from alignment at CM002473.1:227300..230449- (Nannochloropsis gaditana)
TACGGCCTGTGAGGTGGCGGCTTGAAGGGATGGCGAGCCTCTCGGAAACG
TTCTGGGTGGCCGGGCTTGTCAACCTGCTCGACGCTCGCACTTAAGTTTC
CCGCGGCTGCACTTAGCAAGTCGTGAGTCGCTTCTCATGAGGGCATCCTT
TGTGATAACATCGCGTCGGATGTGAATACGGTATTCCACGCGTTACAAAA
AGAAAAAATCAAAAAATGCGTCGCGGGGTATTTAGTACGCTCTGTCTCCT
TCACAGGTAGGGGAAGATGAAGAAGGGATGAAAGTTAAAAAAACATGAGT
TGTAACTTCTTTTTATATCACAGTATCAAACATGTCGTGGCCTCAACCCT
GGGGGCCGTTGGTTGTCCATCCTGGAAACAATTGCACGTAGGCGCACCTC
CACTGATATGTCAAACCCAGACCCTATGCCGACTACGCCTTTCCCGTTGA
GCAGCGGGCGCACGTGGCATGCCGCTGCTGTGGCTGCGGCTGCTGCTGCC
TCTGCCGCTGCTGCTGCTGACCCGCTTGTATCAGCCAGGGAAGGGAAGGC
TGGCGAGGATTCGGGAAGTGGGTTGGTAGTCCATCACATTGTTCTGAGTG
AATTCGACATCGTCACTGGCTCGACTGTCCGGTACCAGTATCCTCGACCT
GTGCCAGGCGAGTCGCCGGACAGCCTGGCGGAGAAGATGCTGCCGGAGGG
AGCACACAGCCACGCAGAGAATGAAACCTGGTTTTTTTTCAACCGAGGGT
CTTTGACGTGGGACGAGCAGGAGGCGGCAGAGGAGGGGGGGCACACGACG
GACGACAGGGCCGGAGAAGAAAACGACCGTGTGGACGGGGAAAGCATGAA
CATTATTTCGCCAGCTCCGCCGTTTCTTTACGGCTACAGCATTGTCAAGA
CCCAACGCGATCCCCATGCACGTCGGGGGGCTTGGGTGAAGGCGCTGGCA
TTGGTCTCCCCGCTGCCCATTTTGGAGGCCCTCCGCCCGGCCATGGCCCT
GGCTCTGGATGAATGCTTCTCTCGGGACTCTCACCCTGCAACAGTACCCG
CGCCACCACCCGAAGCGCCCCCCCCCGCCCTCCCTCCCTCTTCTGGAGGC
GAAGACGCCCTCCTCCAGGTCATTCGCCGCCTCTTTCACCGACTCAACGC
CCTCGACCTCCGGCAAATCCCGCGTCCCACCCTGCTCGAGCGCCAGCTCA
TGCGTCGGGGGGTCTGCACACCCGTCGTCCCCGCAGCAGATCTCACTCGG
CCCGACTCGGTCTACCACCCCTCTCACCCGGCATGGAGGAGGCGGGTCTC
CTTGCCTTGGGCGGACCTTCCTCAGGGGCTTCAGGCGGTGGGAGGGGGCC
GGGAGGAGGAGAGAGGCCGGACGAGCCCTGCGCTGACCCACCCTCAGCCA
CGCCTTCCGCGGCCCCCCGAGCCCGTCACCCTCTCCCTCGCCTTCTCTCT
TCCCCGCTATTCGGACGAGGCCGGTCGCCCCTCTCTTGCCTGGCTGCTCC
GGCGCTTTCCCGACGACCTGATGCGGATCTACCAGGCCCTCCTTCTGGGG
AAACGCCTCCTCTTCCTGACCGTCTCGGAGCCAGCCGCCTCCGCCTGTCG
CGCCGTCCTCTCCTCCCTCCTCCTGCTCTCCCCCCCCTTCCTCGGACTTC
TCCGCCGGGCCTTCCCCTACGTCAGCCTGGCCGACCTGAGCTTCCTCCAG
CTCCCTTCGCCTCCCACCACTCCCTCTGTCAGCGACAAGGGGGCTCTCGG
CCTGGCGCGGGGGTATGTGGCGGGCGCCACCAACCCCGTGTTCGCCAGGC
GCGAGGAGTGGTGGGACCTCCTGTGCGACCTGGACCGCGGCCGCTGCTTC
CTGCCGGGGGAGGCAGGAGGAGGGGAGGGAGAGGGTGACGGAGGCACGTT
GGGAGGGAGAGGGGCAGGACGGGAGGGGGGCAAAGGCGGAGTGTGCGAGT
ATTTGGAGGGAGAGCTGCTGTCAGGGGAGCTCGATGCCGCCTTTTCGGCG
CACTTGCGAGCGACCATGGCGGCAGCTTATAGCGCGCCGTTGCGGATGCC
TTCAGGGAGGAGAGAGGTGGAGGGAGGAGGAGGAGCAAGAGAAGGGGCAG
GGACGGAGGGAGGGGGGCTAGAGGAGTACCTCCGGGTCGCTCTAAACGCG
CACACCCAGGCACTCGTGGCGCTGGCGGACGAGGGGGGGTCGCTAGCGCT
CACCAAGCGGTCGCGAGAAGTGGTGGGGCGGATGGCGATGGCTCAGAGCC
ACCGGGTGCAGAGGATGCGGCAGTGGATGGCGGAGGCGGTCCGGGGAAAA
GTCATGGTAAGGGGGCGGGAAGGGAAAGGGAGTGAAGTCGGCCGCCGGAG
GATTCGGCACACGCCCGCCCCAGCCTCTCCCCTTCTCACGTGCTCAGCTT
CCCCCCCTCGCCGCAACAGCTCGTGATGGACCCCTGGGCCGGGCTGGCCT
CCCTCCGCCTCCCTCTTGCCGCCATGCGGTCCCACTGCCACCTTTTGGAG
CTGGCCGCGTCCCTCTCCGAGGCCGAGGTCGAGGGCATCCTCAGCGACCT
GAATCAAGCCCTGCAGGACCCCTCGGCCGCCCTCGCCTTCCTCGCCGCCA
CTCCCGAGCATAGCCACTACGATAAGCGGGTGTTGGGAGGGGCGGGAGCC
TTCTCCGTGGTGGGCGCTGCCTTATTCCACCCCTCTCAGAACTGCAGGTT
TTATGCCTGTCTCATATTGCATAGATTGGAGCTGTGCCCAGCCTCAAGGC
CGGCTGTGGAGTCTCTGAACGGGATGGTGCGTCTGGCCTACCGGCGAGTT
TGGCGGGAGATGACATCTGGGTGAAAGAGGGGTGTGGGAAGAGGGCGGAG
CGTGGAGGAGGGTGTGGTAGAACCCTGTTTGCGTAGGCCTGCAGGCATTA
GAAGCCAGCGGCAGTCGGGGTGATCGATCCCGGGCCAGCCTCGTAGGGGT
ACGGGGGGGGCTTAATGCTTGGAATGGGTTTTGGAAAACAATGGAGCGCA
CTCGTCCTAATGCAATCCTCTCATATGTGCGAAGTACAGAAAGTAAAGTT
AATTACAGGCTAACATCGCGTTGTCGCCTTCAATTTTTATTTTAGATGTG
TGACATGAAACGATGATGGGAAAATGGAGCTATTCCCCAACAAAATATGC
back to topCoding sequence (CDS) from alignment at CM002473.1:227300..230449- >rna7743 ID=rna7743|Name=rna7743|organism=Nannochloropsis gaditana|type=CDS|length=2019bp|location=Sequence derived from alignment at CM002473.1:227300..230449- (Nannochloropsis gaditana)
ATGTCAAACCCAGACCCTATGCCGACTACGCCTTTCCCGTTGAGCAGCGG
GCGCACGTGGCATGCCGCTGCTGTGGCTGCGGCTGCTGCTGCCTCTGCCG
CTGCTGCTGCTGACCCGCTTGTATCAGCCAGGGAAGGGAAGGCTGGCGAG
GATTCGGGAAGTGGGTTGGTAGTCCATCACATTGTTCTGAGTGAATTCGA
CATCGTCACTGGCTCGACTGTCCGGTACCAGTATCCTCGACCTGTGCCAG
GCGAGTCGCCGGACAGCCTGGCGGAGAAGATGCTGCCGGAGGGAGCACAC
AGCCACGCAGAGAATGAAACCTGGTTTTTTTTCAACCGAGGGTCTTTGAC
GTGGGACGAGCAGGAGGCGGCAGAGGAGGGGGGGCACACGACGGACGACA
GGGCCGGAGAAGAAAACGACCGTGTGGACGGGGAAAGCATGAACATTATT
TCGCCAGCTCCGCCGTTTCTTTACGGCTACAGCATTGTCAAGACCCAACG
CGATCCCCATGCACGTCGGGGGGCTTGGGTGAAGGCGCTGGCATTGGTCT
CCCCGCTGCCCATTTTGGAGGCCCTCCGCCCGGCCATGGCCCTGGCTCTG
GATGAATGCTTCTCTCGGGACTCTCACCCTGCAACAGTACCCGCGCCACC
ACCCGAAGCGCCCCCCCCCGCCCTCCCTCCCTCTTCTGGAGGCGAAGACG
CCCTCCTCCAGGTCATTCGCCGCCTCTTTCACCGACTCAACGCCCTCGAC
CTCCGGCAAATCCCGCGTCCCACCCTGCTCGAGCGCCAGCTCATGCGTCG
GGGGGTCTGCACACCCGTCGTCCCCGCAGCAGATCTCACTCGGCCCGACT
CGGTCTACCACCCCTCTCACCCGGCATGGAGGAGGCGGGTCTCCTTGCCT
TGGGCGGACCTTCCTCAGGGGCTTCAGGCGGTGGGAGGGGGCCGGGAGGA
GGAGAGAGGCCGGACGAGCCCTGCGCTGACCCACCCTCAGCCACGCCTTC
CGCGGCCCCCCGAGCCCGTCACCCTCTCCCTCGCCTTCTCTCTTCCCCGC
TATTCGGACGAGGCCGGTCGCCCCTCTCTTGCCTGGCTGCTCCGGCGCTT
TCCCGACGACCTGATGCGGATCTACCAGGCCCTCCTTCTGGGGAAACGCC
TCCTCTTCCTGACCGTCTCGGAGCCAGCCGCCTCCGCCTGTCGCGCCGTC
CTCTCCTCCCTCCTCCTGCTCTCCCCCCCCTTCCTCGGACTTCTCCGCCG
GGCCTTCCCCTACGTCAGCCTGGCCGACCTGAGCTTCCTCCAGCTCCCTT
CGCCTCCCACCACTCCCTCTGTCAGCGACAAGGGGGCTCTCGGCCTGGCG
CGGGGGTATGTGGCGGGCGCCACCAACCCCGTGTTCGCCAGGCGCGAGGA
GTGGTGGGACCTCCTGTGCGACCTGGACCGCGGCCGCTGCTTCCTGCCGG
GGGAGGCAGGAGGAGGGGAGGGAGAGGGTGACGGAGGCACGTTGGGAGGG
AGAGGGGCAGGACGGGAGGGGGGCAAAGGCGGAGTGTGCGAGTATTTGGA
GGGAGAGCTGCTGTCAGGGGAGCTCGATGCCGCCTTTTCGGCGCACTTGC
GAGCGACCATGGCGGCAGCTTATAGCGCGCCGTTGCGGATGCCTTCAGGG
AGGAGAGAGGTGGAGGGAGGAGGAGGAGCAAGAGAAGGGGCAGGGACGGA
GGGAGGGGGGCTAGAGGAGTACCTCCGGGTCGCTCTAAACGCGCACACCC
AGGCACTCGTGGCGCTGGCGGACGAGGGGGGGTCGCTAGCGCTCACCAAG
CGGTCGCGAGAAGTGGTGGGGCGGATGGCGATGGCTCAGAGCCACCGGGT
GCAGAGGATGCGGCAGTGGATGGCGGAGGCGGTCCGGGGAAAAGTCATGG
TAAGGGGGCGGGAAGGGAAAGGGAGTGAAGTCGGCCGCCGGAGGATTCGG
CACACGCCCGCCCCAGCCTCTCCCCTTCTCACGTGCTCAGCTTCCCCCCC
TCGCCGCAACAGCTCGTGA back to top
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