EWM22950.1, cds7722 (CDS) Nannochloropsis gaditana

Overview
NameEWM22950.1
Unique Namecds7722
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:228024..230042 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22950.1
ProductArf3-interacting protein 1, N-terminal domain protein
Orig transcript idgnl|cribi|Naga_100396g2.7448.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:228024..230042 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR012860Afi1_N
Homology
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|585103682|gb|EWM22950.1| (Arf3-interacting protein 1, N-terminal domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1333.16 bits (3449), Expect = 0.000e+0
Identity = 672/672 (100.00%), Postives = 672/672 (100.00%), Query Frame = 0
Query:    1 MSNPDPMPTTPFPLSSGRTWHAAAVAAAAAASAAAAADPLVSAREGKAGEDSGSGLVVHHIVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAGGGEGEGDGGTLGGRGAGREGGKGGVCEYLEGELLSGELDAAFSAHLRATMAAAYSAPLRMPSGRREVEGGGGAREGAGTEGGGLEEYLRVALNAHTQALVALADEGGSLALTKRSREVVGRMAMAQSHRVQRMRQWMAEAVRGKVMVRGREGKGSEVGRRRIRHTPAPASPLLTCSASPPRRNSS 672
            MSNPDPMPTTPFPLSSGRTWHAAAVAAAAAASAAAAADPLVSAREGKAGEDSGSGLVVHHIVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAGGGEGEGDGGTLGGRGAGREGGKGGVCEYLEGELLSGELDAAFSAHLRATMAAAYSAPLRMPSGRREVEGGGGAREGAGTEGGGLEEYLRVALNAHTQALVALADEGGSLALTKRSREVVGRMAMAQSHRVQRMRQWMAEAVRGKVMVRGREGKGSEVGRRRIRHTPAPASPLLTCSASPPRRNSS
Sbjct:    1 MSNPDPMPTTPFPLSSGRTWHAAAVAAAAAASAAAAADPLVSAREGKAGEDSGSGLVVHHIVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAGGGEGEGDGGTLGGRGAGREGGKGGVCEYLEGELLSGELDAAFSAHLRATMAAAYSAPLRMPSGRREVEGGGGAREGAGTEGGGLEEYLRVALNAHTQALVALADEGGSLALTKRSREVVGRMAMAQSHRVQRMRQWMAEAVRGKVMVRGREGKGSEVGRRRIRHTPAPASPLLTCSASPPRRNSS 672          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|553187844|ref|XP_005854690.1| (spindle pole body interacting protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294369|gb|EKU21669.1| spindle pole body interacting protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 464.922 bits (1195), Expect = 1.413e-158
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0
Query:  272 PVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAGGGEGEGDGGTLGGRGAGREGG 508
            PVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERG+TSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAGGGEGEGDGGTLGG GAGREGG
Sbjct:    1 PVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGQTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAGGGEGEGDGGTLGGSGAGREGG 237          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|298713483|emb|CBJ27038.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 190.66 bits (483), Expect = 1.385e-48
Identity = 172/576 (29.86%), Postives = 237/576 (41.15%), Query Frame = 0
Query:   72 STVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQE-----------AAEEGGHT------TDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTP---VVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPGEAG----GGEGEGDGGTLGGRGAGREGGKGGVCEYLEGELLS--GELDAAFSAHLRATMAAAYSAPLRMPSGRREVEGGGGAREGAGTEGGGLEEYLRVALNAHTQALVALADEGGSLALTKRSREVVGRMAMAQSHRVQRMR 621
            STVR+ YP  VPG S D  AE MLPEGAH+HA + T  F NR     DE             +AE+G  +        D++ E      GE          FL+  ++V+ Q DP  RRGA VKA+ + S    +E  RP + +AL++ + R      VP                      +V+  LF  LN+  L   PRPT  ER LMRRGV       VP   L             W   +S  +           GG                          T+  +  L  + DE   PS+  L+  F  ++M IY A+L G+R++F+  +  A   C+ VL++  L+SPP  G+L RA+PY SL+DLSFL+  S                  YVAG TNP+F    EWWD+LC LD     LP  +G      E   DGG  GG    + GG GG      GE  S  G  DA       A  A                      +  AG +GG  E + R   + +TQ LV L  +  +    + +   + +  +A   R++R+R
Sbjct:   15 STVRHAYPSSVPGVSDDWFAEHMLPEGAHNHALDWTVMFLNRDKTALDEDWPAYFDCDEPAGSAEKGRSSAGGIDAVGDKSYEPRLARGGEGEGEGEEGRSFLHCINLVRKQDDPTVRRGAVVKAMCICSRYNYIEVFRPMLMIALEQYYQRQ-----VP----------------------EVLESLFEALNSAHLAGAPRPTPWERALMRRGVADKHMGTVPVEHLA----------ATWTYMMSFKYC----------GG--------------------------TVQASIPLYAFPDETLSPSVTLLVNLFGQNVMAIYNAVLTGRRVIFVGYNHAAGDVCKIVLAACALVSPPIQGILHRAYPYASLSDLSFLETTS------------------YVAGVTNPMFETHPEWWDVLCQLD-----LPNGSGTVITTEEMFSDGG--GGLHRVKSGGVGGSMTNTNGEDKSKTGGKDAGLFFQGDANFA---------------------TKLLAGVKGGKGESWARCEFHDYTQGLVDLVLDQHAGLHERLTSLSLDKTMIANEGRLRRLR 471          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|301121216|ref|XP_002908335.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103366|gb|EEY61418.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 184.882 bits (468), Expect = 6.762e-48
Identity = 132/451 (29.27%), Postives = 193/451 (42.79%), Query Frame = 0
Query:   62 VLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNR----GSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFL--PGEAGGGEGEGDGGTLGGRGAGRE 506
            + +EFD+  GST+R  YP P    SP+  A+ MLPEG H+  E+ T FF NR     S+  DE+++ E    T D+               I  P   F+Y  S+V+T  D  ARRGA V A+AL S      AL+  + LA+ +                          S  E+    V++ LF   NA+D+  +   + +ER+LM+R + +    AA+  R D+       A   R    W D+P  LQ                                    F +    D+    +L  LL+ F D  M ++ A+L G+R++ L  + PA   C  VL++  L+ PP  GL+ R +PY +L DL FL  P                  GY+AG TNP+F  + EWWD+LCD+  G  F+  P E    +       L G  AG +
Sbjct:   19 LYAEFDLTKGSTLRASYPSPFAHYSPEFFADIMLPEGVHNREEDFTIFFLNRQNAHKSINTDEKDSNESQTRTADE---------------IQDPLQSFMYCLSVVRTTHDTAARRGAKVTAVALCSTHKSCFALKDVLNLAVLKIVG-----------------------SKSEEESGNVLKELFAVANAVDISGVRGLSNMERRLMKRTISSTGRAAAN--REDA--QTLEKALFFRTQAMWEDIPIPLQ------------------------------------FKICSTDDQHDDGTLTQLLQTFGDQTMVLFNAVLTGQRVIMLGYNRPAGEVCNFVLATSSLVCPPLFGLIHRQYPYANLTDLGFLSTP------------------GYIAGVTNPMFKTKREWWDVLCDISTGEVFVSAPVEKEDHDVSDRSFVLDGVAAGYD 373          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|568028761|gb|ETM02697.1| (hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568028762|gb|ETM02698.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568059395|gb|ETM55971.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568059396|gb|ETM55972.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|570998031|gb|ETP54312.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570998032|gb|ETP54313.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 181.03 bits (458), Expect = 2.701e-47
Identity = 120/422 (28.44%), Postives = 180/422 (42.65%), Query Frame = 0
Query:   61 IVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFL 482
            ++ +EFD+  GST+R  YP P    SP+  A+ MLPEG H+  E+ T FF NR +         +E   +    A E+ D           P   F+Y  S+V+T  D  ARRGA V A+AL S      AL   + LA+ +                          S  E+    V++ LF   NA+D+  +   + +ER+LM+R + +    +A+     ++      A   R    W D+P  LQ                                    F +    D+    +L  LL+ F D  M ++ A+L G+R++ L  + PA   C  VL++  L+ PP  GL+ R +PY +L DL FL  P                  GY+AG TNP+F  + EWWD+LCD+  G  F+
Sbjct:   20 VLYAEFDLTKGSTLRASYPTPFAHYSPEFFADIMLPEGVHNREEDFTIFFLNRQNAHKHSDTEEQESNESQKQTADEDQD-----------PLQSFMYCLSVVRTTHDTAARRGAKVTAVALCSTHKSCFALNDVLNLAVLKIVG-----------------------SKSEEESENVLKELFAVANAVDISGVRGLSNMERRLMKRTISSTGRASANWEDAQTL----EKALFFRTQAMWEDIPIPLQ------------------------------------FKICSTDDQHDDGTLTQLLQTFGDQTMVLFNAVLTGQRVIMLGYNRPAGEVCNFVLATSSLVCPPLFGLIHRQYPYANLTDLGFLSTP------------------GYIAGVTNPMFKTKREWWDVLCDISTGEVFV 349          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|567999615|gb|ETL49651.1| (hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567999616|gb|ETL49652.1| hypothetical protein, variant 3 [Phytophthora parasitica])

HSP 1 Score: 180.644 bits (457), Expect = 3.660e-47
Identity = 120/422 (28.44%), Postives = 180/422 (42.65%), Query Frame = 0
Query:   61 IVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFL 482
            ++ +EFD+  GST+R  YP P    SP+  A+ MLPEG H+  E+ T FF NR +         +E   +    A E+ D           P   F+Y  S+V+T  D  ARRGA V A+AL S      AL   + LA+ +                          S  E+    V++ LF   NA+D+  +   + +ER+LM+R + +    +A+     ++      A   R    W D+P  LQ                                    F +    D+    +L  LL+ F D  M ++ A+L G+R++ L  + PA   C  VL++  L+ PP  GL+ R +PY +L DL FL  P                  GY+AG TNP+F  + EWWD+LCD+  G  F+
Sbjct:   20 VLYAEFDLTKGSTLRASYPTPFAHYSPEFFADIMLPEGVHNREEDFTIFFLNRQNAHKHSDTEEQESNESQKQTADEDQD-----------PLQSFMYCLSVVRTTHDTAARRGAKVTAVALCSTHKSCFALNDVLNLAVLKIVG-----------------------SKSEEESENVLKELFAVANAVDISGVRGLSNMERRLMKRTISSTGRASANWEDAQTL----EKALFFRTQAMWEDIPIPLQ------------------------------------FKICSTDDQHDDGTLTQLLQTFGDQTMVLFNAVLTGQRVIMLGYNRPAGEVCNFVLATSSLVCPPLFGLIHRQYPYANLTDLGFLSTP------------------GYIAGVTNPMFKTKREWWDVLCDISTGEVFV 349          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|567971268|gb|ETK96279.1| (hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567971269|gb|ETK96280.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|570961277|gb|ETP26256.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570961278|gb|ETP26257.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 180.259 bits (456), Expect = 1.002e-46
Identity = 120/422 (28.44%), Postives = 180/422 (42.65%), Query Frame = 0
Query:   61 IVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFL 482
            ++ +EFD+  GST+R  YP P    SP+  A+ MLPEG H+  E+ T FF NR +         +E   +    A E+ D           P   F+Y  S+V+T  D  ARRGA V A+AL S      AL   + LA+ +                          S  E+    V++ LF   NA+D+  +   + +ER+LM+R + +    +A+     ++      A   R    W D+P  LQ                                    F +    D+    +L  LL+ F D  M ++ A+L G+R++ L  + PA   C  VL++  L+ PP  GL+ R +PY +L DL FL  P                  GY+AG TNP+F  + EWWD+LCD+  G  F+
Sbjct:   61 VLYAEFDLTKGSTLRASYPTPFAHYSPEFFADIMLPEGVHNREEDFTIFFLNRQNAHKHSDTEEQESNESQKQTADEDQD-----------PLQSFMYCLSVVRTTHDTAARRGAKVTAVALCSTHKSCFALNDVLNLAVLKIVG-----------------------SKSEEESENVLKELFAVANAVDISGVRGLSNMERRLMKRTISSTGRASANWEDAQTL----EKALFFRTQAMWEDIPIPLQ------------------------------------FKICSTDDQHDDGTLTQLLQTFGDQTMVLFNAVLTGQRVIMLGYNRPAGEVCNFVLATSSLVCPPLFGLIHRQYPYANLTDLGFLSTP------------------GYIAGVTNPMFKTKREWWDVLCDISTGEVFV 390          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|566033578|gb|ETI56489.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|566033579|gb|ETI56490.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569])

HSP 1 Score: 180.259 bits (456), Expect = 1.467e-46
Identity = 120/422 (28.44%), Postives = 180/422 (42.65%), Query Frame = 0
Query:   61 IVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFL 482
            ++ +EFD+  GST+R  YP P    SP+  A+ MLPEG H+  E+ T FF NR +         +E   +    A E+ D           P   F+Y  S+V+T  D  ARRGA V A+AL S      AL   + LA+ +                          S  E+    V++ LF   NA+D+  +   + +ER+LM+R + +    +A+     ++      A   R    W D+P  LQ                                    F +    D+    +L  LL+ F D  M ++ A+L G+R++ L  + PA   C  VL++  L+ PP  GL+ R +PY +L DL FL  P                  GY+AG TNP+F  + EWWD+LCD+  G  F+
Sbjct:   72 VLYAEFDLTKGSTLRASYPTPFAHYSPEFFADIMLPEGVHNREEDFTIFFLNRQNAHKHSDTEEQESNESQKQTADEDQD-----------PLQSFMYCLSVVRTTHDTAARRGAKVTAVALCSTHKSCFALNDVLNLAVLKIVG-----------------------SKSEEESENVLKELFAVANAVDISGVRGLSNMERRLMKRTISSTGRASANWEDAQTL----EKALFFRTQAMWEDIPIPLQ------------------------------------FKICSTDDQHDDGTLTQLLQTFGDQTMVLFNAVLTGQRVIMLGYNRPAGEVCNFVLATSSLVCPPLFGLIHRQYPYANLTDLGFLSTP------------------GYIAGVTNPMFKTKREWWDVLCDISTGEVFV 401          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|570337346|gb|ETO85294.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570337347|gb|ETO85295.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976])

HSP 1 Score: 180.259 bits (456), Expect = 1.606e-46
Identity = 120/422 (28.44%), Postives = 180/422 (42.65%), Query Frame = 0
Query:   61 IVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFL 482
            ++ +EFD+  GST+R  YP P    SP+  A+ MLPEG H+  E+ T FF NR +         +E   +    A E+ D           P   F+Y  S+V+T  D  ARRGA V A+AL S      AL   + LA+ +                          S  E+    V++ LF   NA+D+  +   + +ER+LM+R + +    +A+     ++      A   R    W D+P  LQ                                    F +    D+    +L  LL+ F D  M ++ A+L G+R++ L  + PA   C  VL++  L+ PP  GL+ R +PY +L DL FL  P                  GY+AG TNP+F  + EWWD+LCD+  G  F+
Sbjct:   72 VLYAEFDLTKGSTLRASYPTPFAHYSPEFFADIMLPEGVHNREEDFTIFFLNRQNAHKHSDTEEQESNESQKQTADEDQD-----------PLQSFMYCLSVVRTTHDTAARRGAKVTAVALCSTHKSCFALNDVLNLAVLKIVG-----------------------SKSEEESENVLKELFAVANAVDISGVRGLSNMERRLMKRTISSTGRASANWEDAQTL----EKALFFRTQAMWEDIPIPLQ------------------------------------FKICSTDDQHDDGTLTQLLQTFGDQTMVLFNAVLTGQRVIMLGYNRPAGEVCNFVLATSSLVCPPLFGLIHRQYPYANLTDLGFLSTP------------------GYIAGVTNPMFKTKREWWDVLCDISTGEVFV 401          
BLAST of EWM22950.1 vs. NCBI_GenBank
Match: gi|568028760|gb|ETM02696.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568059394|gb|ETM55970.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570998030|gb|ETP54311.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 179.489 bits (454), Expect = 6.019e-46
Identity = 120/424 (28.30%), Postives = 180/424 (42.45%), Query Frame = 0
Query:   61 IVLSEFDIVTGSTVRYQYPRPVPGESPDSLAEKMLPEGAHSHAENETWFFFNRGSLTWDEQEAAEEGGHTTDDRAGEENDRVDGESMNIISPAPPFLYGYSIVKTQRDPHARRGAWVKALALVSPLPILEALRPAMALALDECFSRDSHPATVPAPPPEAPPPALPPSSGGEDALLQVIRRLFHRLNALDLRQIPRPTLLERQLMRRGVCTPVVPAADLTRPDSVYHPSHPAWRRRVSLPWADLPQGLQAVGGGREEERGRTSPALTHPQPRLPRPPEPVTLSLAFSLPRYSDEAGRPSLAWLLRRFPDDLMRIYQALLLGKRLLFLTVSEPAASACRAVLSSLLLLSPPFLGLLRRAFPYVSLADLSFLQLPSPPTTPSVSDKGALGLARGYVAGATNPVFARREEWWDLLCDLDRGRCFLPG 484
            ++ +EFD+  GST+R  YP P    SP+  A+ MLPEG H+  E+ T FF NR +         +E   +    A E+ D           P   F+Y  S+V+T  D  ARRGA V A+AL S      AL   + LA+ +                          S  E+    V++ LF   NA+D+  +   + +ER+LM+R + +    +A+     ++      A   R    W D+P  LQ                                    F +    D+    +L  LL+ F D  M ++ A+L G+R++ L  + PA   C  VL++  L+ PP  GL+ R +PY +L DL FL  P                  GY+AG TNP+F  + EWWD+LCD+  G  F+  
Sbjct:   20 VLYAEFDLTKGSTLRASYPTPFAHYSPEFFADIMLPEGVHNREEDFTIFFLNRQNAHKHSDTEEQESNESQKQTADEDQD-----------PLQSFMYCLSVVRTTHDTAARRGAKVTAVALCSTHKSCFALNDVLNLAVLKIVG-----------------------SKSEEESENVLKELFAVANAVDISGVRGLSNMERRLMKRTISSTGRASANWEDAQTL----EKALFFRTQAMWEDIPIPLQ------------------------------------FKICSTDDQHDDGTLTQLLQTFGDQTMVLFNAVLTGQRVIMLGYNRPAGEVCNFVLATSSLVCPPLFGLIHRQYPYANLTDLGFLSTP------------------GYIAGVTNPMFKTKREWWDVLCDISTGEVFVSA 351          
The following BLAST results are available for this feature:
BLAST of EWM22950.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103682|gb|EWM22950.1|0.000e+0100.00Arf3-interacting protein 1, N-terminal domain prot... [more]
gi|553187844|ref|XP_005854690.1|1.413e-15899.16spindle pole body interacting protein, partial [Na... [more]
gi|298713483|emb|CBJ27038.1|1.385e-4829.86conserved unknown protein [Ectocarpus siliculosus][more]
gi|301121216|ref|XP_002908335.1|6.762e-4829.27conserved hypothetical protein [Phytophthora infes... [more]
gi|568028761|gb|ETM02697.1|2.701e-4728.44hypothetical protein, variant 2 [Phytophthora para... [more]
gi|567999615|gb|ETL49651.1|3.660e-4728.44hypothetical protein, variant 2 [Phytophthora para... [more]
gi|567971268|gb|ETK96279.1|1.002e-4628.44hypothetical protein, variant 2 [Phytophthora para... [more]
gi|566033578|gb|ETI56489.1|1.467e-4628.44hypothetical protein, variant 2 [Phytophthora para... [more]
gi|570337346|gb|ETO85294.1|1.606e-4628.44hypothetical protein, variant 2 [Phytophthora para... [more]
gi|568028760|gb|ETM02696.1|6.019e-4628.30hypothetical protein, variant 1 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7743rna7743Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications