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Properties
| Property Name | Value |
|---|
| Product | eukaryotic initiation factor 4a |
| Orig transcript id | gnl|cribi|Naga_100102g18.65.mrna |
| Orig protein id | gnl|cribi|Naga_100102g18.65 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:203274..205871 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7738 ID=rna7738|Name=rna7738|organism=Nannochloropsis gaditana|type=mRNA|length=2027bp
TCTCACGCCAACCTACATCACAATTTTGACGTCCTCGGCCGTACGGCATA
TGCAGGGGCAGCCAAGACATAGTCGTTTGCCACTTTGGGGAAAAAAACTC
CCGAAAATGTGGGCCATTCAGTGTCGTGGGAATGCCGTGCCCTTGCACAC
CTACAGACGAGCTTGGGGAGGTGCAGAGTGCAAGATTGGAGGTCACTCCC
ATGACCATTTGAGAATGCTACCCTTAGAGCCACACGTTTTGGGCCAAAAT
GAACTTCTAACCTTGGGAGCTGACAATTTGCGCCGTTTTGCGGTGACAAA
AGGACCTTCCACAAAGCTTTTGGAGGGCTTCCGTGCCAGTTCCAATGCGA
CGCGGACTTATCTCCGACAATCAACATCAATGTCGTCTTCGGGGGTTTTG
CCTCATTCGGCTCTAAGTAAAGCAGCAGACAACATGATGAGTGGCCTTCA
TGAACGCCCCGCACCTCGTGGGCAAGATCAACGGAATGGTATTCGTGGAG
AGTTTCTTGGATCATCCAGTACACATCATGTGTCTGAAGTTTCACATGAT
ATGTTCGCGCCAGTGCCATTCCAGCATGACTGCAAAGCTACACTTTTCCC
GACTGATGATGATGCTTGCGACCCCCTGTTTAACAAAAAGATTAAAAAGT
CGATTGCGCAAGCAGGCGCTGCAGCAGTTGTGACGAGCACTGTCTATCAG
GCAGTTAAGCATCACAAGCACAAGAATGACAGGCAATCGGCAGGCGATGG
CAACATATCTCAAACAATCGAGGAGAAACGCAAGCGAGCAGGGGAAAGTG
GGCCGTTGACAGAGCCCACGGCAGAGTTTATGGCAACGGATCCGTGGAGA
GGTGACGAACCAATTCAAGAGCCAACGCTGGACACTGCCGAGGCGTGGAG
CACATTGCTACGCACTGCTCCCGCCTGGTCGCAGCTACGATTGTACTCTT
TTATCCGGTCACTAGGTAAAGGTTCTCATGCTGAAGCTCTTCTGGTCGAA
AAAGGTTCGTACGAAAGAGACAAGAGAAAAAAATTGTGTGTTCTTAAAGT
GAGTAGTTTTTTGCCTGAGGCGATAAATGAAAGCCGACTGCTGAGTGTCC
TATCGGCAAAGAGTAATATTGCCCATCCGTATGTTGTACGCTTGGAGGAT
GTCCATGTGGAACAGTTTGGAACGAGCCACTTGGCTTTCTTACAGTTAGA
GTATTGCGAAGGTGGAGACTTGGACACTTATGTGCGGGGGCGAGGAACTT
ATTGCCGGCACGCATTTGATGACGTGCACATACATTACATCGCGAGCGAG
TTGTTGGCCGGCCTAGCATCATTGCATGCCCAAGAAATCGTCCATCGGGA
TGTCAAGCCAGCGAACATACTCCTTGGGACGGATGGTGATGTGAAGCTTT
GTGATTTTGGTGTTGCCAGCCAATATAGAGATATTTGGCCCGATGGGTCA
TATGTTCCTGCGGGATCACTAGCTTACATGAGCCCAGAGATTCGTCAAAT
GCTGTCATGTGCATCGGAAAGGGATCAATCAACATATAATATTGCCACAA
CTAGAGAGCTACCGGTCCTGACTTTAACAGGAAAGGTAGACGTCTGGGCA
TTATCTTGCGTTGTGTATGCCTTGTGTCTGTCTATCTCTGAACCCAATTT
GGTCGATGTACCTCCCTTGCAAGCGGTCGCTGAGGTTTGCGATCACAGAG
GATGGCCTCCGTTTAATGCTTCCCATAAAATTTCAAGTAAAGATCCTGGA
AAGGTAGCCAATGAGATATGTTGGCTTTTGGTGTTGGGTCTGCAGCCAAA
TCCAGAATTACGCCCTTCTGCAGAAGATTTGAAAAAGTTCGTGTCTTGTT
CTGAGAAACAAACCAATATTGAATGGTTGGCTCGTCTGTAAAGGAGATTA
GTAAATGCACCGTGTTCATAAATACTGTACATGATGCTTTCAAATTTGAG
AAAGAAGTCGTAATACAATGTGATGGAGGATTTTTGTGGCTTGTATCTCA
TTTTGATAGACACGACAGATACTGAAT back to topprotein sequence of rna7738 >rna7738-protein ID=rna7738-protein|Name=rna7738|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp
MAADPKAAVSASGSADGPGLNSQQPSSADIDTNWDECVETFDSMDLREDL
LRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQS
IDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVRE
DIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFK
EQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTL
EGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMT
KRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSL
VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNT
QIEEMPSDVADLI back to topmRNA from alignment at CM002473.1:203274..205871+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7738 ID=rna7738|Name=rna7738|organism=Nannochloropsis gaditana|type=mRNA|length=2598bp|location=Sequence derived from alignment at CM002473.1:203274..205871+ (Nannochloropsis gaditana)
ATTCGTCACCGCTTTTTTTTTGTCtccgacccctcctccttgaccacaGC
ATTTTCTAAAACCATCTCCGCCATCGCGCTTTAAGCATGGCTGCCGATCC
GAAAGCCGCTGTCTCCGCCTCGGGCTCGGCGGATGGACCGGGATTAAATT
CACAGCAACCATCGTCCGCCGATATAGACACAAACTGGGATGAGTGCGTG
GAGACTTTCGACTCCATGGACCTGCGCGAAGATCTCCTCCGCGGCATCTA
CGCTTTCGGCTTCGAGAAGCCGTCCGCAATCCAACAGCGGGCGGTGAAAC
CTGTTCTTATGGGCCGTGATGTCATTGCACAAGCCCAATCAGGTCAGTGG
CCCTGAGTAGGACGGGTGGAAGAATGACTGCTGTGGAAGTTGCCTGTGGG
CGCCGGGCTCGGAAGGAATAAAGTTCTGGGATGGGACGTCGGCGGACAGG
GGCGAGTGTGGGAATGATGATTGTGAAATTTAAACACCATCTTTCGAGTC
TTAGCGCTGCGCGCGTTGACGACAAGCATTCATCTCTGACAACCTGACCC
AACTCGCACCCGAATATCTTCACTTCTACTGCCCACCCATTGTTCTGATT
GTTCATCTGGTTGGTGTTTTCCCTGGTTGTCCTGAACCATATCTCGCCAT
GTTCGTGTGACAGGGACGGGTAAGACGGCGACCTTCGCCATCAGCATCCT
CCAGTCTATCGACACTTCAATCCGGGAATGCCAAGCGTTGGTCCTAGCAC
CCACGCGAGAGCTGGCCCTACAAATCAGAAAGGTCCTTGTCTCGCTGGGC
GACTTCGTGGAGACGCTCCAGGTGCACGCCTGTGTAGGAGGCACGGCGGT
GCGGGAAGATATTGCCAAGCTGCGCAACGGTGTACATGTGGTGGTGGGCA
CGCCGGGGCGAGTGTACGACATGATCAATCGGCGGGCGCTGAAGATGTCG
TATGTGAAGCTGTtcgtgctggacgaggcggatgAGATGCTATCGCGCGG
GTTCAAGGAGCAGATTTATGACGTCTTCAAGTTCCTCCCGGAGAAGGTGC
AGTGCGCCCTATTTTCGGCCACCATGCCCTTAGAGGTCTTGGAGGTGACC
AACAAATTCATGAGAGAGCCCGTGCGCATCCTTGTGAAGCGCGACGAGCT
CACACTGGAGGGGATCAAGCAGTTCTACGTGGCGGTAGAACGCGAGGACT
GGAAGCTGGACACGCTCTGTGATTTGTATGAGACGCTCACGATCACTCAG
GCCATCATCTACTGCAATACAAGGAGAAAGGTAAGAGCTCAGGAGTTAGG
AAGCTATTGATGGTGAGATGATCTAGTTGGGGGAAATGTCTCTCGATGGT
GAAATTAATAAGTGGGTGCAATATATATACATCCGTGCTGGCATGTTTTA
GTTAAGCTTTCTCTAATGGTTCGCCCTCTCAGGTCGACTGGCTGACGGAG
CAAATGACGAAGCGAGATTTCACGGTCTCGGCCATGCACGGTGACATGGA
CCAGAGGGAGCGAGACGTGATCATGAAGGAGTTCCGCTCGGGCTCCTCAC
GCGTCCTCATCACGACCGACCTTCTCGCGCGCGGCATCGACGTGCAGCAG
GTTTCGCTTGTCATCAACTACGATCTCCCCACTAATCGCGAGAACTACAT
CCACCGCATCGGTCGGTCGGGTCGCTTTGGGCGCAAGGGGGTGGCCATCA
ACTTTGTGACGCAGGGTGACTTACAATACATGAAGGACATCGAGGTCTTT
TACAACACCCAGATTGAGGAGATGCCCAGCGATGTGGCAGATCTCATCTA
GGCATGCTTTCCTCGGCATCACACCAGCTTTGAAAAGCACACGAAAAGGA
ATTTTGCGGGCGAGAGAGATGCAAGGAAAAATAGGTCGTCTGTCGGTCGC
AGGTCTGCACATAGCTTGATTTAAGACGCCATGGGTAGTGTGCTTTTGGG
AACGAAGAAATTGGAGTGGATGCGAGGTGTGTGATTGTGTGTTTTTGTTC
GTGTCTGTATGCTGTTGTGTAAGGCCATACTTTACCTGAGTGTGCTCGTT
GAGGAGAGTGGAAAATCGAGTGAAGATGTAATCTCAGCACTCTGTGCAGG
GAGACTCAGGCTTTTGGAAGAATATTACCGAAAGcagaaatgaaggaggg
acatgATCGGAGGTGTATCGATGAGACCCAGAAGCTTGAGGCTAGAGGAG
ATTCTTCCTGCGTCGAAAAATGGGGGTCACCACCTTATCACAGCACCTCA
GAGCAACTCCATAATTTCAGTTACGTCTCTTGCAAAGGCTTGCAGAAACA
AGGACTGCCGCAACAGCGAACAGGAGTTGTCTTCGAGAGTTTCAAGGCac
accacctctcccccctctcccttttcaggAAGAAACTATTGGGGCAAAAG
CCCGCCGCCAAGCAAGGATGTGTGCGCAAAGAGCAACGAGACGATAGATG
AATGGAGCGCACCAGTCTCCTCAAGAGCGAAGAAGGTAGTGAGCGATTAC
GATGgtgaaaaaaagaaaaaaggctTTGGTGATAAGAACCGTGTGTGCTG
TGTGCTTTTCTCAGAACCCTGAAATGAATCACACAAATTTTCTAGACA back to topCoding sequence (CDS) from alignment at CM002473.1:203274..205871+ >rna7738 ID=rna7738|Name=rna7738|organism=Nannochloropsis gaditana|type=CDS|length=3726bp|location=Sequence derived from alignment at CM002473.1:203274..205871+ (Nannochloropsis gaditana)
ATGGCTGCCGATCCGAAAGCCGCTGTCTCCGCCTCGGGCTCGGCGGATGG
ACCGGGATTAAATTCACAGCAACCATCGTCCGCCGATATAGACACAAACT
GGGATGAGTGCGTGGAGACTTTCGACTCCATGGACCTGCGCGAAGATCTC
CTCCGCGGCATCTACGCTTTCGGCTTCGAGAAGCCGTCCGCAATCCAACA
GCGGGCGGTGAAACCTGTTCTTATGGGCCGTGATGTCATTGCACAAGCCC
AATCAGGGACGGGTAAGACGGCGACCTTCGCCATCAGCATCCTCCAGTCT
ATCGACACTTCAATCCGGGAATGCCAAGCGTTGGTCCTAGCACCCACGCG
AGAGCTGGCCCTACAAATCAGAAAGGTCCTTGTCTCGCTGGGCGACTTCG
TGGAGACGCTCCAGGTGCACGCCTGTGTAGGAGGCACGGCGGTGCGGGAA
GATATTGCCAAGCTGCGCAACGGTGTACATGTGGTGGTGGGCACGCCGGG
GCGAGTGTACGACATGATCAATCGGCGGGCGCTGAAGATGTCGTATGTGA
AGCTGTtcgtgctggacgaggcggatgAGATGCTATCGCGCGGGTTCAAG
GAGCAGATTTATGACGTCTTCAAGTTCCTCCCGGAGAAGGTGCAGTGCGC
CCTATTTTCGGCCACCATGCCCTTAGAGGTCTTGGAGGTGACCAACAAAT
TCATGAGAGAGCCCGTGCGCATCCTTGTGAAGCGCGACGAGCTCACACTG
GAGGGGATCAAGCAGTTCTACGTGGCGGTAGAACGCGAGGACTGGAAGCT
GGACACGCTCTGTGATTTGTATGAGACGCTCACGATCACTCAGGCCATCA
TCTACTGCAATACAAGGAGAAAGGTCGACTGGCTGACGGAGCAAATGACG
AAGCGAGATTTCACGGTCTCGGCCATGCACGGTGACATGGACCAGAGGGA
GCGAGACGTGATCATGAAGGAGTTCCGCTCGGGCTCCTCACGCGTCCTCA
TCACGACCGACCTTCTCGCGCGCGGCATCGACGTGCAGCAGGTTTCGCTT
GTCATCAACTACGATCTCCCCACTAATCGCGAGAACTACATCCACCGCAT
CGGTCGGTCGGGTCGCTTTGGGCGCAAGGGGGTGGCCATCAACTTTGTGA
CGCAGGGTGACTTACAATACATGAAGGACATCGAGGTCTTTTACAACACC
CAGATTGAGGAGATGCCCAGCGATGTGGCAGATCTCATCTAGATGGCTGC
CGATCCGAAAGCCGCTGTCTCCGCCTCGGGCTCGGCGGATGGACCGGGAT
TAAATTCACAGCAACCATCGTCCGCCGATATAGACACAAACTGGGATGAG
TGCGTGGAGACTTTCGACTCCATGGACCTGCGCGAAGATCTCCTCCGCGG
CATCTACGCTTTCGGCTTCGAGAAGCCGTCCGCAATCCAACAGCGGGCGG
TGAAACCTGTTCTTATGGGCCGTGATGTCATTGCACAAGCCCAATCAGGG
ACGGGTAAGACGGCGACCTTCGCCATCAGCATCCTCCAGTCTATCGACAC
TTCAATCCGGGAATGCCAAGCGTTGGTCCTAGCACCCACGCGAGAGCTGG
CCCTACAAATCAGAAAGGTCCTTGTCTCGCTGGGCGACTTCGTGGAGACG
CTCCAGGTGCACGCCTGTGTAGGAGGCACGGCGGTGCGGGAAGATATTGC
CAAGCTGCGCAACGGTGTACATGTGGTGGTGGGCACGCCGGGGCGAGTGT
ACGACATGATCAATCGGCGGGCGCTGAAGATGTCGTATGTGAAGCTGTtc
gtgctggacgaggcggatgAGATGCTATCGCGCGGGTTCAAGGAGCAGAT
TTATGACGTCTTCAAGTTCCTCCCGGAGAAGGTGCAGTGCGCCCTATTTT
CGGCCACCATGCCCTTAGAGGTCTTGGAGGTGACCAACAAATTCATGAGA
GAGCCCGTGCGCATCCTTGTGAAGCGCGACGAGCTCACACTGGAGGGGAT
CAAGCAGTTCTACGTGGCGGTAGAACGCGAGGACTGGAAGCTGGACACGC
TCTGTGATTTGTATGAGACGCTCACGATCACTCAGGCCATCATCTACTGC
AATACAAGGAGAAAGGTCGACTGGCTGACGGAGCAAATGACGAAGCGAGA
TTTCACGGTCTCGGCCATGCACGGTGACATGGACCAGAGGGAGCGAGACG
TGATCATGAAGGAGTTCCGCTCGGGCTCCTCACGCGTCCTCATCACGACC
GACCTTCTCGCGCGCGGCATCGACGTGCAGCAGGTTTCGCTTGTCATCAA
CTACGATCTCCCCACTAATCGCGAGAACTACATCCACCGCATCGGTCGGT
CGGGTCGCTTTGGGCGCAAGGGGGTGGCCATCAACTTTGTGACGCAGGGT
GACTTACAATACATGAAGGACATCGAGGTCTTTTACAACACCCAGATTGA
GGAGATGCCCAGCGATGTGGCAGATCTCATCTAGATGGCTGCCGATCCGA
AAGCCGCTGTCTCCGCCTCGGGCTCGGCGGATGGACCGGGATTAAATTCA
CAGCAACCATCGTCCGCCGATATAGACACAAACTGGGATGAGTGCGTGGA
GACTTTCGACTCCATGGACCTGCGCGAAGATCTCCTCCGCGGCATCTACG
CTTTCGGCTTCGAGAAGCCGTCCGCAATCCAACAGCGGGCGGTGAAACCT
GTTCTTATGGGCCGTGATGTCATTGCACAAGCCCAATCAGGGACGGGTAA
GACGGCGACCTTCGCCATCAGCATCCTCCAGTCTATCGACACTTCAATCC
GGGAATGCCAAGCGTTGGTCCTAGCACCCACGCGAGAGCTGGCCCTACAA
ATCAGAAAGGTCCTTGTCTCGCTGGGCGACTTCGTGGAGACGCTCCAGGT
GCACGCCTGTGTAGGAGGCACGGCGGTGCGGGAAGATATTGCCAAGCTGC
GCAACGGTGTACATGTGGTGGTGGGCACGCCGGGGCGAGTGTACGACATG
ATCAATCGGCGGGCGCTGAAGATGTCGTATGTGAAGCTGTtcgtgctgga
cgaggcggatgAGATGCTATCGCGCGGGTTCAAGGAGCAGATTTATGACG
TCTTCAAGTTCCTCCCGGAGAAGGTGCAGTGCGCCCTATTTTCGGCCACC
ATGCCCTTAGAGGTCTTGGAGGTGACCAACAAATTCATGAGAGAGCCCGT
GCGCATCCTTGTGAAGCGCGACGAGCTCACACTGGAGGGGATCAAGCAGT
TCTACGTGGCGGTAGAACGCGAGGACTGGAAGCTGGACACGCTCTGTGAT
TTGTATGAGACGCTCACGATCACTCAGGCCATCATCTACTGCAATACAAG
GAGAAAGGTCGACTGGCTGACGGAGCAAATGACGAAGCGAGATTTCACGG
TCTCGGCCATGCACGGTGACATGGACCAGAGGGAGCGAGACGTGATCATG
AAGGAGTTCCGCTCGGGCTCCTCACGCGTCCTCATCACGACCGACCTTCT
CGCGCGCGGCATCGACGTGCAGCAGGTTTCGCTTGTCATCAACTACGATC
TCCCCACTAATCGCGAGAACTACATCCACCGCATCGGTCGGTCGGGTCGC
TTTGGGCGCAAGGGGGTGGCCATCAACTTTGTGACGCAGGGTGACTTACA
ATACATGAAGGACATCGAGGTCTTTTACAACACCCAGATTGAGGAGATGC
CCAGCGATGTGGCAGATCTCATCTAG back to top
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